RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 KLK9Q2XQG4 91 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 PRSS54Q6PEW0 395 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 OR2T35Q8NGX2 323 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 THAP6Q8TBB0 222 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 TMEM170AQ8WVE7 144 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 PINX1Q96BK5 328 aaKnown RBP7.21□□□□□ -1.26
HIF3A-219ENST00000600879 RNF126Q9BV68 326 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 C11orf1Q9H5F2 150 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 MBD2Q9UBB5 411 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 SMPXQ9UHP9 88 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 KLK9Q9UKQ9 250 aa7.21□□□□□ -1.26
HIF3A-219ENST00000600879 ELOA3CA0A087WX78 387 aaPredicted RBP7.2□□□□□ -1.26
HIF3A-219ENST00000600879 TRAV14DV4A0A0A6YYC5 116 aa7.2□□□□□ -1.26
HIF3A-219ENST00000600879 FAM24AA6NFZ4 105 aa7.2□□□□□ -1.26
HIF3A-219ENST00000600879 NDUFA4O00483 81 aa7.2□□□□□ -1.26
HIF3A-219ENST00000600879 CHEK1O14757 476 aa7.2□□□□□ -1.26
HIF3A-219ENST00000600879 CCNKO75909 580 aa7.2□□□□□ -1.26
HIF3A-219ENST00000600879 MT-CO2P00403 227 aa7.2□□□□□ -1.26
HIF3A-219ENST00000600879 METTL15P1P0C7V9 234 aa7.2□□□□□ -1.26
HIF3A-219ENST00000600879 P0DMU3 169 aa7.2□□□□□ -1.26
HIF3A-219ENST00000600879 FAM231AP0DMU4 169 aa7.2□□□□□ -1.26
HIF3A-219ENST00000600879 FAM231CP0DMU5 169 aa7.2□□□□□ -1.26
HIF3A-219ENST00000600879 OPRK1P41145 380 aa7.2□□□□□ -1.26
HIF3A-219ENST00000600879 P2RY1P47900 373 aa7.2□□□□□ -1.26
HIF3A-219ENST00000600879 OR8G2PQ6IF36 304 aa7.2□□□□□ -1.26
HIF3A-219ENST00000600879 AKAP14Q86UN6 197 aa7.2□□□□□ -1.26
HIF3A-219ENST00000600879 RNASEH2CQ8TDP1 164 aaKnown RBP7.2□□□□□ -1.26
HIF3A-219ENST00000600879 BSCL2Q96G97 398 aaPredicted RBP7.2□□□□□ -1.26
HIF3A-219ENST00000600879 RHPN1-AS1Q9BWJ2 59 aa7.2□□□□□ -1.26
HIF3A-219ENST00000600879 HRH4Q9H3N8 390 aa7.2□□□□□ -1.26
HIF3A-219ENST00000600879 CELA1Q9UNI1 258 aa7.2□□□□□ -1.26
HIF3A-219ENST00000600879 DEFB131BA0A096LNP1 70 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 IGHV7-4-1A0A0J9YVY3 117 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 RPS10-NUDT3A0A1W2PQS6 291 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 C16orf90A8MZG2 172 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 SMLR1H3BR10 107 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 I3L2K1 104 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 K7EIM0 57 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 YIF1AO95070 293 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 IGHV3-48P01763 117 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 DEFB131AP59861 70 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 Q56UQ5 140 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 Q5BKY6 102 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 TMEM14EPQ6UXP3 125 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 FAM24BQ8N5W8 94 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 TMEM116Q8NCL8 245 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 VN1R17PQ8TDU5 208 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 ST6GAL2Q96JF0 529 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 SLC25A31Q9H0C2 315 aa7.19□□□□□ -1.26
HIF3A-219ENST00000600879 FNDC4Q9H6D8 234 aaPredicted RBP7.19□□□□□ -1.26
HIF3A-219ENST00000600879 LYRM2Q9NU23 88 aaPredicted RBP7.19□□□□□ -1.26
HIF3A-219ENST00000600879 FXYD6-FXYD2A0A087WZ82 144 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 IGSF23A1L1A6 192 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 F8W735 103 aaPredicted RBP7.18□□□□□ -1.26
HIF3A-219ENST00000600879 K7EMT4 169 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 AMBPP02760 352 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 SLC25A4P12235 298 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 NUP62P37198 522 aaPredicted RBP7.18□□□□□ -1.26
HIF3A-219ENST00000600879 MFAP4P55083 255 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 CMC4P56277 68 aaPredicted RBP7.18□□□□□ -1.26
HIF3A-219ENST00000600879 MLANAQ16655 118 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 LGALS9BQ3B8N2 356 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 ETFRF1Q6IPR1 90 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 TCF24Q7RTU0 167 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 STX12Q86Y82 276 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 UBE2DNLQ8IWF7 75 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 TMEM252Q8N6L7 170 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 OR10P1Q8NGE3 313 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 SCARB1Q8WTV0 552 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 ZNF414Q96IQ9 312 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 SLC35E1Q96K37 410 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 NDUFAF3Q9BU61 184 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 SCRT2Q9NQ03 307 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 CLEC5AQ9NY25 188 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 C21orf62Q9NYP8 219 aa7.18□□□□□ -1.26
HIF3A-219ENST00000600879 IGHV3-66A0A0C4DH42 116 aa7.17□□□□□ -1.26
HIF3A-219ENST00000600879 PMS2P5A8MQ11 134 aa7.17□□□□□ -1.26
HIF3A-219ENST00000600879 G3V3Q6 166 aa7.17□□□□□ -1.26
HIF3A-219ENST00000600879 NUPL2O15504 423 aaKnown RBP7.17□□□□□ -1.26
HIF3A-219ENST00000600879 CST7O76096 145 aa7.17□□□□□ -1.26
HIF3A-219ENST00000600879 GIG44P09565 113 aaPredicted RBP7.17□□□□□ -1.26
HIF3A-219ENST00000600879 C4BPBP20851 252 aa7.17□□□□□ -1.26
HIF3A-219ENST00000600879 RPL12P30050 165 aaKnown RBP7.17□□□□□ -1.26
HIF3A-219ENST00000600879 GPX4P36969 197 aaPredicted RBP7.17□□□□□ -1.26
HIF3A-219ENST00000600879 SULT1A1P50225 295 aa7.17□□□□□ -1.26
HIF3A-219ENST00000600879 ARL16Q0P5N6 197 aa7.17□□□□□ -1.26
HIF3A-219ENST00000600879 C12orf74Q32Q52 190 aa7.17□□□□□ -1.26
HIF3A-219ENST00000600879 SPSB3Q6PJ21 355 aa7.17□□□□□ -1.26
HIF3A-219ENST00000600879 STHQ8IWL8 128 aa7.17□□□□□ -1.26
HIF3A-219ENST00000600879 TCTE3Q8IZS6 198 aa7.17□□□□□ -1.26
HIF3A-219ENST00000600879 ACY3Q96HD9 319 aa7.17□□□□□ -1.26
HIF3A-219ENST00000600879 X6R8D5 127 aa7.17□□□□□ -1.26
HIF3A-219ENST00000600879 SMCO3A2RU48 225 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 KNCNA6PVL3 124 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 PRSS46E5RG02 174 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 DNASE2O00115 360 aaPredicted RBP7.16□□□□□ -1.26
HIF3A-219ENST00000600879 GNG7O60262 68 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 MIFP14174 115 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 NPBWR1P48145 328 aa7.16□□□□□ -1.26
HIF3A-219ENST00000600879 RND2P52198 227 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms