RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 DEDDO75618 318 aa11.58□□□□□ -0.56
RPS28-203ENST00000600659 CFDP00746 253 aaPredicted RBP11.58□□□□□ -0.56
RPS28-203ENST00000600659 CMC4P56277 68 aaPredicted RBP11.58□□□□□ -0.56
RPS28-203ENST00000600659 H2BFSP57053 126 aa11.58□□□□□ -0.56
RPS28-203ENST00000600659 PLP1P60201 277 aa11.58□□□□□ -0.56
RPS28-203ENST00000600659 S100A10P60903 97 aa11.58□□□□□ -0.56
RPS28-203ENST00000600659 BPIFCQ8NFQ6 507 aa11.58□□□□□ -0.56
RPS28-203ENST00000600659 GGACTQ9BVM4 153 aa11.58□□□□□ -0.56
RPS28-203ENST00000600659 NPVFQ9HCQ7 196 aa11.58□□□□□ -0.56
RPS28-203ENST00000600659 NRN1Q9NPD7 142 aa11.58□□□□□ -0.56
RPS28-203ENST00000600659 LYRM2Q9NU23 88 aaPredicted RBP11.58□□□□□ -0.56
RPS28-203ENST00000600659 SLC45A2Q9UMX9 530 aa11.58□□□□□ -0.56
RPS28-203ENST00000600659 RYR3Q15413 4870 aa11.57□□□□□ -0.56
RPS28-203ENST00000600659 L7N2F9 121 aa11.57□□□□□ -0.56
RPS28-203ENST00000600659 CST7O76096 145 aa11.57□□□□□ -0.56
RPS28-203ENST00000600659 NUP62P37198 522 aaPredicted RBP11.57□□□□□ -0.56
RPS28-203ENST00000600659 AP2S1P53680 142 aaPredicted RBP11.57□□□□□ -0.56
RPS28-203ENST00000600659 APOC4P55056 127 aa11.57□□□□□ -0.56
RPS28-203ENST00000600659 VAMP2P63027 116 aa11.57□□□□□ -0.56
RPS28-203ENST00000600659 SLC38A11Q08AI6 406 aa11.57□□□□□ -0.56
RPS28-203ENST00000600659 VWC2Q2TAL6 325 aa11.57□□□□□ -0.56
RPS28-203ENST00000600659 DEFB135Q30KP9 77 aa11.57□□□□□ -0.56
RPS28-203ENST00000600659 C1orf194Q5T5A4 169 aa11.57□□□□□ -0.56
RPS28-203ENST00000600659 Q6ZWC4 215 aa11.57□□□□□ -0.56
RPS28-203ENST00000600659 TMEM252Q8N6L7 170 aa11.57□□□□□ -0.56
RPS28-203ENST00000600659 NMES1Q9C002 83 aa11.57□□□□□ -0.56
RPS28-203ENST00000600659 SLC25A32Q9H2D1 315 aa11.57□□□□□ -0.56
RPS28-203ENST00000600659 PLECQ15149 4684 aaKnown RBP11.56□□□□□ -0.56
RPS28-203ENST00000600659 ZNF98A6NK75 572 aa11.56□□□□□ -0.56
RPS28-203ENST00000600659 ORM2P19652 201 aa11.56□□□□□ -0.56
RPS28-203ENST00000600659 CAV2P51636 162 aa11.56□□□□□ -0.56
RPS28-203ENST00000600659 TEPPQ6URK8 271 aa11.56□□□□□ -0.56
RPS28-203ENST00000600659 MUC7Q8TAX7 377 aa11.56□□□□□ -0.56
RPS28-203ENST00000600659 MGST2Q99735 147 aa11.56□□□□□ -0.56
RPS28-203ENST00000600659 OR5AC2Q9NZP5 309 aa11.56□□□□□ -0.56
RPS28-203ENST00000600659 MGAT4CQ9UBM8 478 aa11.56□□□□□ -0.56
RPS28-203ENST00000600659 H3BRN7 92 aa11.55□□□□□ -0.56
RPS28-203ENST00000600659 UBE2CO00762 179 aa11.55□□□□□ -0.56
RPS28-203ENST00000600659 GIG44P09565 113 aaPredicted RBP11.55□□□□□ -0.56
RPS28-203ENST00000600659 LINC00869P0C866 280 aa11.55□□□□□ -0.56
RPS28-203ENST00000600659 BCAP31P51572 246 aa11.55□□□□□ -0.56
RPS28-203ENST00000600659 PATE2Q6UY27 113 aa11.55□□□□□ -0.56
RPS28-203ENST00000600659 TRPT1Q86TN4 253 aaKnown RBP11.55□□□□□ -0.56
RPS28-203ENST00000600659 SCRT1Q9BWW7 348 aa11.55□□□□□ -0.56
RPS28-203ENST00000600659 SEPSECSQ9HD40 501 aaKnown RBP11.55□□□□□ -0.56
RPS28-203ENST00000600659 DOK5Q9P104 306 aa11.55□□□□□ -0.56
RPS28-203ENST00000600659 TP53TG1Q9Y2A0 90 aa11.55□□□□□ -0.56
RPS28-203ENST00000600659 KNCNA6PVL3 124 aa11.54□□□□□ -0.56
RPS28-203ENST00000600659 AGPAT2O15120 278 aa11.54□□□□□ -0.56
RPS28-203ENST00000600659 PTTG1O95997 202 aa11.54□□□□□ -0.56
RPS28-203ENST00000600659 PVALBP20472 110 aaPredicted RBP11.54□□□□□ -0.56
RPS28-203ENST00000600659 SULT1A1P50225 295 aa11.54□□□□□ -0.56
RPS28-203ENST00000600659 SELENOTP62341 195 aa11.54□□□□□ -0.56
RPS28-203ENST00000600659 PSMG4Q5JS54 123 aa11.54□□□□□ -0.56
RPS28-203ENST00000600659 TMEM217Q8N7C4 229 aa11.54□□□□□ -0.56
RPS28-203ENST00000600659 OR1B1Q8NGR6 318 aa11.54□□□□□ -0.56
RPS28-203ENST00000600659 RNF183Q96D59 192 aa11.54□□□□□ -0.56
RPS28-203ENST00000600659 SHANK2-AS3Q9BTD1 123 aa11.54□□□□□ -0.56
RPS28-203ENST00000600659 SLC25A39Q9BZJ4 359 aaPredicted RBP11.54□□□□□ -0.56
RPS28-203ENST00000600659 FBXL17Q9UF56 701 aa11.54□□□□□ -0.56
RPS28-203ENST00000600659 WDR83OSQ9Y284 106 aa11.54□□□□□ -0.56
RPS28-203ENST00000600659 DEFB1P60022 68 aa11.53□□□□□ -0.56
RPS28-203ENST00000600659 LRRC37A5PQ49AS3 106 aa11.53□□□□□ -0.56
RPS28-203ENST00000600659 OR8I2Q8N0Y5 310 aa11.53□□□□□ -0.56
RPS28-203ENST00000600659 UHRF2Q96PU4 802 aa11.53□□□□□ -0.56
RPS28-203ENST00000600659 TMEM147Q9BVK8 224 aa11.53□□□□□ -0.56
RPS28-203ENST00000600659 CSTL1Q9H114 145 aa11.53□□□□□ -0.56
RPS28-203ENST00000600659 ALG5Q9Y673 324 aa11.53□□□□□ -0.56
RPS28-203ENST00000600659 LYSTQ99698 3801 aa11.52□□□□□ -0.57
RPS28-203ENST00000600659 C3orf84H3BNL1 204 aa11.52□□□□□ -0.57
RPS28-203ENST00000600659 MRPS12O15235 138 aaKnown RBP11.52□□□□□ -0.57
RPS28-203ENST00000600659 SPRY2O43597 315 aa11.52□□□□□ -0.57
RPS28-203ENST00000600659 C4BPBP20851 252 aa11.52□□□□□ -0.57
RPS28-203ENST00000600659 PRR20EP86478 221 aa11.52□□□□□ -0.57
RPS28-203ENST00000600659 PRR20CP86479 221 aa11.52□□□□□ -0.57
RPS28-203ENST00000600659 PRR20DP86480 221 aa11.52□□□□□ -0.57
RPS28-203ENST00000600659 PRR20BP86481 221 aa11.52□□□□□ -0.57
RPS28-203ENST00000600659 PRR20AP86496 221 aa11.52□□□□□ -0.57
RPS28-203ENST00000600659 EWSR1Q01844 656 aaKnown RBP eCLIP11.52□□□□□ -0.57
RPS28-203ENST00000600659 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.52□□□□□ -0.57
RPS28-203ENST00000600659 ZNF546Q86UE3 836 aa11.52□□□□□ -0.57
RPS28-203ENST00000600659 PPP1R1CQ8WVI7 109 aa11.52□□□□□ -0.57
RPS28-203ENST00000600659 PPP1R14BQ96C90 147 aa11.52□□□□□ -0.57
RPS28-203ENST00000600659 RNF126Q9BV68 326 aa11.52□□□□□ -0.57
RPS28-203ENST00000600659 SLC25A22Q9H936 323 aa11.52□□□□□ -0.57
RPS28-203ENST00000600659 UQCC1Q9NVA1 299 aa11.52□□□□□ -0.57
RPS28-203ENST00000600659 PFDN2Q9UHV9 154 aa11.52□□□□□ -0.57
RPS28-203ENST00000600659 SSNA1O43805 119 aa11.51□□□□□ -0.57
RPS28-203ENST00000600659 HYPMO75409 117 aa11.51□□□□□ -0.57
RPS28-203ENST00000600659 NHLH2Q02577 135 aa11.51□□□□□ -0.57
RPS28-203ENST00000600659 ACTL10Q5JWF8 245 aa11.51□□□□□ -0.57
RPS28-203ENST00000600659 CASC10Q5T4H9 136 aa11.51□□□□□ -0.57
RPS28-203ENST00000600659 GDF5OSQ5U4N7 250 aa11.51□□□□□ -0.57
RPS28-203ENST00000600659 MORN5Q5VZ52 161 aa11.51□□□□□ -0.57
RPS28-203ENST00000600659 STHQ8IWL8 128 aa11.51□□□□□ -0.57
RPS28-203ENST00000600659 TMEM37Q8WXS4 190 aa11.51□□□□□ -0.57
RPS28-203ENST00000600659 ARV1Q9H2C2 271 aa11.51□□□□□ -0.57
RPS28-203ENST00000600659 HIGD1AQ9Y241 93 aa11.51□□□□□ -0.57
RPS28-203ENST00000600659 UBE2L5PA0A1B0GUS4 154 aa11.5□□□□□ -0.57
RPS28-203ENST00000600659 E5RGE8 158 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms