RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 NUP62P37198 522 aaPredicted RBP6.44□□□□□ -1.38
SSBP4-208ENST00000600628 TFPI2P48307 235 aa6.44□□□□□ -1.38
SSBP4-208ENST00000600628 APOC4P55056 127 aa6.44□□□□□ -1.38
SSBP4-208ENST00000600628 H2BFSP57053 126 aa6.44□□□□□ -1.38
SSBP4-208ENST00000600628 SIGLEC15Q6ZMC9 328 aa6.44□□□□□ -1.38
SSBP4-208ENST00000600628 TRPT1Q86TN4 253 aaKnown RBP6.44□□□□□ -1.38
SSBP4-208ENST00000600628 ENKURQ8TC29 256 aa6.44□□□□□ -1.38
SSBP4-208ENST00000600628 NMES1Q9C002 83 aa6.44□□□□□ -1.38
SSBP4-208ENST00000600628 NPVFQ9HCQ7 196 aa6.44□□□□□ -1.38
SSBP4-208ENST00000600628 NRN1Q9NPD7 142 aa6.44□□□□□ -1.38
SSBP4-208ENST00000600628 LYRM2Q9NU23 88 aaPredicted RBP6.44□□□□□ -1.38
SSBP4-208ENST00000600628 GSKIPQ9P0R6 139 aa6.44□□□□□ -1.38
SSBP4-208ENST00000600628 DNAH6Q9C0G6 4158 aa6.43□□□□□ -1.38
SSBP4-208ENST00000600628 ZNF98A6NK75 572 aa6.43□□□□□ -1.38
SSBP4-208ENST00000600628 A8MTW9 85 aa6.43□□□□□ -1.38
SSBP4-208ENST00000600628 INMT-MINDY4F8WBC2 141 aa6.43□□□□□ -1.38
SSBP4-208ENST00000600628 H0YIZ8 118 aa6.43□□□□□ -1.38
SSBP4-208ENST00000600628 MRPS12O15235 138 aaKnown RBP6.43□□□□□ -1.38
SSBP4-208ENST00000600628 GATA2P23769 480 aaPredicted RBP6.43□□□□□ -1.38
SSBP4-208ENST00000600628 DEFB131AP59861 70 aa6.43□□□□□ -1.38
SSBP4-208ENST00000600628 SELENOTP62341 195 aa6.43□□□□□ -1.38
SSBP4-208ENST00000600628 RPL11P62913 178 aaKnown RBP6.43□□□□□ -1.38
SSBP4-208ENST00000600628 RAB32Q13637 225 aa6.43□□□□□ -1.38
SSBP4-208ENST00000600628 ZFAND6Q6FIF0 208 aa6.43□□□□□ -1.38
SSBP4-208ENST00000600628 PATE2Q6UY27 113 aa6.43□□□□□ -1.38
SSBP4-208ENST00000600628 CYP2G1PQ6ZSU1 146 aa6.43□□□□□ -1.38
SSBP4-208ENST00000600628 CSNK1G2-AS1Q8NCQ2 148 aa6.43□□□□□ -1.38
SSBP4-208ENST00000600628 OR10P1Q8NGE3 313 aa6.43□□□□□ -1.38
SSBP4-208ENST00000600628 NARS2Q96I59 477 aaKnown RBP6.43□□□□□ -1.38
SSBP4-208ENST00000600628 CLUHP3Q96NS8 147 aa6.43□□□□□ -1.38
SSBP4-208ENST00000600628 CSTL1Q9H114 145 aa6.43□□□□□ -1.38
SSBP4-208ENST00000600628 IGSF23A1L1A6 192 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 H3BRN7 92 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 DNASE2O00115 360 aaPredicted RBP6.42□□□□□ -1.38
SSBP4-208ENST00000600628 LINC00869P0C866 280 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 RPL35AP18077 110 aaKnown RBP6.42□□□□□ -1.38
SSBP4-208ENST00000600628 LYZP61626 148 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 PRR20EP86478 221 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 PRR20CP86479 221 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 PRR20DP86480 221 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 PRR20BP86481 221 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 PRR20AP86496 221 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 OR2F1Q13607 317 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 TEPPQ6URK8 271 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 GSG1LQ6UXU4 331 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 TMEM252Q8N6L7 170 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 BPIFCQ8NFQ6 507 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 STXBP6Q8NFX7 210 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 IL17DQ8TAD2 202 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 SHANK2-AS3Q9BTD1 123 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 GPN1Q9HCN4 374 aaPredicted RBP6.42□□□□□ -1.38
SSBP4-208ENST00000600628 FBXL17Q9UF56 701 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 WDR83OSQ9Y284 106 aa6.42□□□□□ -1.38
SSBP4-208ENST00000600628 C5orf51A6NDU8 294 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 H3BMM0 161 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 SPRY2O43597 315 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 ZNF688P0C7X2 276 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 PSMB3P49720 205 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 SULT1A1P50225 295 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 DEFA1P59665 94 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 DEFA3P59666 94 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 EWSR1Q01844 656 aaKnown RBP eCLIP6.41□□□□□ -1.384e-7■■■■■ 29.4
SSBP4-208ENST00000600628 AKR1C1Q04828 323 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 DEFB135Q30KP9 77 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 PXDC1Q5TGL8 231 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 LEMD1Q68G75 181 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 GATAD1Q8WUU5 269 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 MGST2Q99735 147 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 RNF126Q9BV68 326 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 PBDC1Q9BVG4 233 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 SLC25A39Q9BZJ4 359 aaPredicted RBP6.41□□□□□ -1.38
SSBP4-208ENST00000600628 SLC25A32Q9H2D1 315 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 PFDN2Q9UHV9 154 aa6.41□□□□□ -1.38
SSBP4-208ENST00000600628 PAIP2BQ9ULR5 123 aaKnown RBP6.41□□□□□ -1.38
SSBP4-208ENST00000600628 hCG_2014768A0A024R1R8 64 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 A0A087X0K7 114 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 FAM24AA6NFZ4 105 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 ZNF705EA8MWA4 302 aaPredicted RBP6.4□□□□□ -1.38
SSBP4-208ENST00000600628 FAM25EA8MYX2 175 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 ISLRO14498 428 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 AGPAT2O15120 278 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 CST7O76096 145 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 SIX6O95475 246 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 SCGB1D2O95969 90 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 PTTG1O95997 202 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 SPP1P10451 314 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 HLA-DRB4P13762 266 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 C4BPBP20851 252 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 S100A11P31949 105 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 RRAS2P62070 204 aaPredicted RBP6.4□□□□□ -1.38
SSBP4-208ENST00000600628 SLC38A11Q08AI6 406 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 TMEM41BQ5BJD5 291 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 MORN3Q6PF18 240 aaPredicted RBP6.4□□□□□ -1.38
SSBP4-208ENST00000600628 TMEM37Q8WXS4 190 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 GPR82Q96P67 336 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 OR5AC2Q9NZP5 309 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 LSM5Q9Y4Y9 91 aaKnown RBP6.4□□□□□ -1.38
SSBP4-208ENST00000600628 HLA-DRB4X5D2U9 266 aa6.4□□□□□ -1.38
SSBP4-208ENST00000600628 TRAV8-2A0A0B4J237 113 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms