RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 IGLV1-51P01701 117 aa15.12■□□□□ 0.01
SHKBP1-222ENST00000600320 B2MP61769 119 aa15.12■□□□□ 0.01
SHKBP1-222ENST00000600320 ZNF266Q14584 549 aa15.12■□□□□ 0.01
SHKBP1-222ENST00000600320 LGALSLQ3ZCW2 172 aaPredicted RBP15.12■□□□□ 0.01
SHKBP1-222ENST00000600320 ZFP69Q49AA0 526 aa15.12■□□□□ 0.01
SHKBP1-222ENST00000600320 PATE2Q6UY27 113 aa15.12■□□□□ 0.01
SHKBP1-222ENST00000600320 ARL6Q9H0F7 186 aa15.12■□□□□ 0.01
SHKBP1-222ENST00000600320 VSIRQ9H7M9 311 aa15.12■□□□□ 0.01
SHKBP1-222ENST00000600320 A0A0D9SG52 128 aa15.11■□□□□ 0.01
SHKBP1-222ENST00000600320 INSL3P51460 131 aa15.11■□□□□ 0.01
SHKBP1-222ENST00000600320 TMUB2Q71RG4 321 aa15.11■□□□□ 0.01
SHKBP1-222ENST00000600320 HSD17B11Q8NBQ5 300 aa15.11■□□□□ 0.01
SHKBP1-222ENST00000600320 ARPC5LQ9BPX5 153 aa15.11■□□□□ 0.01
SHKBP1-222ENST00000600320 IZUMO1RA6ND01 250 aa15.1■□□□□ 0.01
SHKBP1-222ENST00000600320 TAAR5O14804 337 aa15.1■□□□□ 0.01
SHKBP1-222ENST00000600320 HYPMO75409 117 aa15.1■□□□□ 0.01
SHKBP1-222ENST00000600320 OR5G3P0C626 314 aa15.1■□□□□ 0.01
SHKBP1-222ENST00000600320 CD300EQ496F6 205 aaPredicted RBP15.1■□□□□ 0.01
SHKBP1-222ENST00000600320 ZNF709Q8N972 641 aa15.1■□□□□ 0.01
SHKBP1-222ENST00000600320 TMEM37Q8WXS4 190 aa15.1■□□□□ 0.01
SHKBP1-222ENST00000600320 RNF2Q99496 336 aa15.1■□□□□ 0.01
SHKBP1-222ENST00000600320 BORCS7-ASMTA0A0B4J1R7 106 aa15.09■□□□□ 0.01
SHKBP1-222ENST00000600320 BCL2L11O43521 198 aa15.09■□□□□ 0.01
SHKBP1-222ENST00000600320 BUB3O43684 328 aa15.09■□□□□ 0.01
SHKBP1-222ENST00000600320 ATP6V0CP27449 155 aa15.09■□□□□ 0.01
SHKBP1-222ENST00000600320 GCSAMLQ5JQS6 135 aa15.09■□□□□ 0.01
SHKBP1-222ENST00000600320 C16orf54Q6UWD8 224 aa15.09■□□□□ 0.01
SHKBP1-222ENST00000600320 C9orf62Q8N4C0 152 aa15.09■□□□□ 0.01
SHKBP1-222ENST00000600320 UHRF2Q96PU4 802 aa15.09■□□□□ 0.01
SHKBP1-222ENST00000600320 SCRT1Q9BWW7 348 aa15.09■□□□□ 0.01
SHKBP1-222ENST00000600320 GPR61Q9BZJ8 451 aa15.09■□□□□ 0.01
SHKBP1-222ENST00000600320 ARV1Q9H2C2 271 aa15.09■□□□□ 0.01
SHKBP1-222ENST00000600320 TECRQ9NZ01 308 aaKnown RBP15.09■□□□□ 0.01
SHKBP1-222ENST00000600320 HIGD1AQ9Y241 93 aa15.09■□□□□ 0.01
SHKBP1-222ENST00000600320 C17orf112F2Z3M2 114 aa15.08■□□□□ 0
SHKBP1-222ENST00000600320 H3BRN7 92 aa15.08■□□□□ 0
SHKBP1-222ENST00000600320 NKX2-5P52952 324 aaPredicted RBP15.08■□□□□ 0
SHKBP1-222ENST00000600320 PXDC1Q5TGL8 231 aa15.08■□□□□ 0
SHKBP1-222ENST00000600320 FAM90A2PQ658T7 463 aa15.08■□□□□ 0
SHKBP1-222ENST00000600320 LAMTOR1Q6IAA8 161 aa15.08■□□□□ 0
SHKBP1-222ENST00000600320 Q6ZRG5 221 aa15.08■□□□□ 0
SHKBP1-222ENST00000600320 TMEM61Q8N0U2 210 aa15.08■□□□□ 0
SHKBP1-222ENST00000600320 GLMPQ8WWB7 406 aa15.08■□□□□ 0
SHKBP1-222ENST00000600320 PPP1R14BQ96C90 147 aa15.08■□□□□ 0
SHKBP1-222ENST00000600320 SLC25A39Q9BZJ4 359 aaPredicted RBP15.08■□□□□ 0
SHKBP1-222ENST00000600320 SH3BGRL3Q9H299 93 aa15.08■□□□□ 0
SHKBP1-222ENST00000600320 TIMM9Q9Y5J7 89 aa15.08■□□□□ 0
SHKBP1-222ENST00000600320 KANTRA0A1W2PQU2 76 aa15.07■□□□□ 0
SHKBP1-222ENST00000600320 A0A1W2PS18 150 aa15.07■□□□□ 0
SHKBP1-222ENST00000600320 COX7A2P2O60397 106 aa15.07■□□□□ 0
SHKBP1-222ENST00000600320 PFDN1O60925 122 aa15.07■□□□□ 0
SHKBP1-222ENST00000600320 KRTAP10-11P60412 298 aa15.07■□□□□ 0
SHKBP1-222ENST00000600320 FFAR4Q5NUL3 377 aa15.07■□□□□ 0
SHKBP1-222ENST00000600320 MORN5Q5VZ52 161 aa15.07■□□□□ 0
SHKBP1-222ENST00000600320 TCF24Q7RTU0 167 aa15.07■□□□□ 0
SHKBP1-222ENST00000600320 NARS2Q96I59 477 aaKnown RBP15.07■□□□□ 0
SHKBP1-222ENST00000600320 SHANK2-AS3Q9BTD1 123 aa15.07■□□□□ 0
SHKBP1-222ENST00000600320 KCNIP2Q9NS61 270 aa15.07■□□□□ 0
SHKBP1-222ENST00000600320 ZNF98A6NK75 572 aa15.06■□□□□ 0
SHKBP1-222ENST00000600320 JTBO76095 146 aa15.06■□□□□ 0
SHKBP1-222ENST00000600320 BMI1P35226 326 aa15.06■□□□□ 0
SHKBP1-222ENST00000600320 BEAN1Q3B7T3 259 aa15.06■□□□□ 0
SHKBP1-222ENST00000600320 LEMD1Q68G75 181 aa15.06■□□□□ 0
SHKBP1-222ENST00000600320 TMEM231Q9H6L2 316 aa15.06■□□□□ 0
SHKBP1-222ENST00000600320 DNAJC4Q9NNZ3 241 aa15.06■□□□□ 0
SHKBP1-222ENST00000600320 ZNF785A8K8V0 405 aa15.05■□□□□ -0
SHKBP1-222ENST00000600320 EGFEM1PQ0D2K5 195 aa15.05■□□□□ -0
SHKBP1-222ENST00000600320 C10orf113Q5VZT2 155 aa15.05■□□□□ -0
SHKBP1-222ENST00000600320 OR1L4Q8NGR5 311 aa15.05■□□□□ -0
SHKBP1-222ENST00000600320 OR2K2Q8NGT1 345 aa15.05■□□□□ -0
SHKBP1-222ENST00000600320 GRAMD2BQ96HH9 432 aa15.05■□□□□ -0
SHKBP1-222ENST00000600320 PSMG3Q9BT73 122 aaPredicted RBP15.05■□□□□ -0
SHKBP1-222ENST00000600320 ZNF471Q9BX82 626 aaPredicted RBP15.05■□□□□ -0
SHKBP1-222ENST00000600320 SLC25A22Q9H936 323 aa15.05■□□□□ -0
SHKBP1-222ENST00000600320 IGKV3-7A0A075B6H7 116 aa15.04■□□□□ -0
SHKBP1-222ENST00000600320 ELOA3CA0A087WX78 387 aaPredicted RBP15.04■□□□□ -0
SHKBP1-222ENST00000600320 KPRPQ5T749 579 aaPredicted RBP15.04■□□□□ -0
SHKBP1-222ENST00000600320 SPATA31B1PQ5VZV4 182 aa15.04■□□□□ -0
SHKBP1-222ENST00000600320 LINC00305Q7Z4B0 112 aa15.04■□□□□ -0
SHKBP1-222ENST00000600320 SLC25A32Q9H2D1 315 aa15.04■□□□□ -0
SHKBP1-222ENST00000600320 TRAV5A0A0B4J249 113 aa15.03■□□□□ -0
SHKBP1-222ENST00000600320 TRAV25A0A0B4J276 109 aa15.03■□□□□ -0
SHKBP1-222ENST00000600320 C1orf194Q5T5A4 169 aa15.03■□□□□ -0
SHKBP1-222ENST00000600320 LCN12Q6JVE5 192 aa15.03■□□□□ -0
SHKBP1-222ENST00000600320 OR2G3Q8NGZ4 309 aa15.03■□□□□ -0
SHKBP1-222ENST00000600320 GATAD1Q8WUU5 269 aa15.03■□□□□ -0
SHKBP1-222ENST00000600320 PFDN5Q99471 154 aa15.03■□□□□ -0
SHKBP1-222ENST00000600320 PFDN2Q9UHV9 154 aa15.03■□□□□ -0
SHKBP1-222ENST00000600320 BOLA2-SMG1P6H3BVE0 249 aa15.02■□□□□ -0
SHKBP1-222ENST00000600320 TSPAN4O14817 238 aa15.02■□□□□ -0
SHKBP1-222ENST00000600320 RAB2AP61019 212 aa15.02■□□□□ -0
SHKBP1-222ENST00000600320 GUCA2BQ16661 112 aa15.02■□□□□ -0
SHKBP1-222ENST00000600320 RBPMS2Q6ZRY4 209 aaKnown RBP15.02■□□□□ -0
SHKBP1-222ENST00000600320 OR8I2Q8N0Y5 310 aa15.02■□□□□ -0
SHKBP1-222ENST00000600320 GNPNAT1Q96EK6 184 aaPredicted RBP15.02■□□□□ -0
SHKBP1-222ENST00000600320 MGAM2Q2M2H8 2515 aa15.01□□□□□ -0.01
SHKBP1-222ENST00000600320 EIF3GO75821 320 aaKnown RBP eCLIP15.01□□□□□ -0.01
SHKBP1-222ENST00000600320 FAM78BQ5VT40 261 aa15.01□□□□□ -0.01
SHKBP1-222ENST00000600320 MIR17HGQ75NE6 70 aa15.01□□□□□ -0.01
SHKBP1-222ENST00000600320 GBGT1Q8N5D6 347 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms