RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 SSSCA1O60232 199 aa12.57□□□□□ -0.4
SSBP4-207ENST00000600244 IAPPP10997 89 aa12.57□□□□□ -0.4
SSBP4-207ENST00000600244 NPY1RP25929 384 aa12.57□□□□□ -0.4
SSBP4-207ENST00000600244 TFPI2P48307 235 aa12.57□□□□□ -0.4
SSBP4-207ENST00000600244 TAS2R30P59541 319 aa12.57□□□□□ -0.4
SSBP4-207ENST00000600244 RAB32Q13637 225 aa12.57□□□□□ -0.4
SSBP4-207ENST00000600244 FAM210BQ96KR6 192 aa12.57□□□□□ -0.4
SSBP4-207ENST00000600244 SMPXQ9UHP9 88 aa12.57□□□□□ -0.4
SSBP4-207ENST00000600244 F8W735 103 aaPredicted RBP12.56□□□□□ -0.4
SSBP4-207ENST00000600244 SCGB1D2O95969 90 aa12.56□□□□□ -0.4
SSBP4-207ENST00000600244 MORN3Q6PF18 240 aaPredicted RBP12.56□□□□□ -0.4
SSBP4-207ENST00000600244 NOXA1Q86UR1 476 aa12.56□□□□□ -0.4
SSBP4-207ENST00000600244 C6orf223Q8N319 242 aa12.56□□□□□ -0.4
SSBP4-207ENST00000600244 RNASEH2CQ8TDP1 164 aaKnown RBP12.56□□□□□ -0.4
SSBP4-207ENST00000600244 SCARB1Q8WTV0 552 aa12.56□□□□□ -0.4
SSBP4-207ENST00000600244 ATP6V0BQ99437 205 aa12.56□□□□□ -0.4
SSBP4-207ENST00000600244 FNDC4Q9H6D8 234 aaPredicted RBP12.56□□□□□ -0.4
SSBP4-207ENST00000600244 HMCN2Q8NDA2 5059 aa12.55□□□□□ -0.4
SSBP4-207ENST00000600244 PMS2P5A8MQ11 134 aa12.55□□□□□ -0.4
SSBP4-207ENST00000600244 NDUFA4O00483 81 aa12.55□□□□□ -0.4
SSBP4-207ENST00000600244 ZNF207O43670 478 aaKnown RBP12.55□□□□□ -0.4
SSBP4-207ENST00000600244 TSC22D2O75157 780 aa12.55□□□□□ -0.4
SSBP4-207ENST00000600244 MT-CO2P00403 227 aa12.55□□□□□ -0.4
SSBP4-207ENST00000600244 TMEM41BQ5BJD5 291 aa12.55□□□□□ -0.4
SSBP4-207ENST00000600244 FAM90A2PQ658T7 463 aa12.55□□□□□ -0.4
SSBP4-207ENST00000600244 PPP1R1CQ8WVI7 109 aa12.55□□□□□ -0.4
SSBP4-207ENST00000600244 MISP3Q96FF7 219 aa12.55□□□□□ -0.4
SSBP4-207ENST00000600244 PRSS46E5RG02 174 aa12.54□□□□□ -0.4
SSBP4-207ENST00000600244 H0YIZ8 118 aa12.54□□□□□ -0.4
SSBP4-207ENST00000600244 MLANAQ16655 118 aa12.54□□□□□ -0.4
SSBP4-207ENST00000600244 TMEM14EPQ6UXP3 125 aa12.54□□□□□ -0.4
SSBP4-207ENST00000600244 ASB13Q8WXK3 278 aa12.54□□□□□ -0.4
SSBP4-207ENST00000600244 C20orf24Q9BUV8 137 aa12.54□□□□□ -0.4
SSBP4-207ENST00000600244 PSENENQ9NZ42 101 aa12.54□□□□□ -0.4
SSBP4-207ENST00000600244 LSM5Q9Y4Y9 91 aaKnown RBP12.54□□□□□ -0.4
SSBP4-207ENST00000600244 IGHV3OR16-8A0A075B7F1 116 aa12.53□□□□□ -0.4
SSBP4-207ENST00000600244 H3BP45 60 aa12.53□□□□□ -0.4
SSBP4-207ENST00000600244 CHEK1O14757 476 aa12.53□□□□□ -0.4
SSBP4-207ENST00000600244 KRTAP10-2P60368 255 aa12.53□□□□□ -0.4
SSBP4-207ENST00000600244 RPP30P78346 268 aaKnown RBP12.53□□□□□ -0.4
SSBP4-207ENST00000600244 SPANXN5Q5MJ07 72 aa12.53□□□□□ -0.4
SSBP4-207ENST00000600244 LEMD1Q68G75 181 aa12.53□□□□□ -0.4
SSBP4-207ENST00000600244 LYPD1Q8N2G4 141 aa12.53□□□□□ -0.4
SSBP4-207ENST00000600244 CSNK1G2-AS1Q8NCQ2 148 aa12.53□□□□□ -0.4
SSBP4-207ENST00000600244 CHAC2Q8WUX2 184 aa12.53□□□□□ -0.4
SSBP4-207ENST00000600244 RHPN1-AS1Q9BWJ2 59 aa12.53□□□□□ -0.4
SSBP4-207ENST00000600244 C21orf62Q9NYP8 219 aa12.53□□□□□ -0.4
SSBP4-207ENST00000600244 MRPL36Q9P0J6 103 aaKnown RBP12.53□□□□□ -0.4
SSBP4-207ENST00000600244 STRAPQ9Y3F4 350 aaKnown RBP12.53□□□□□ -0.4
SSBP4-207ENST00000600244 IGKV3-7A0A075B6H7 116 aa12.52□□□□□ -0.41
SSBP4-207ENST00000600244 IGHV3-21A0A0B4J1V1 117 aa12.52□□□□□ -0.41
SSBP4-207ENST00000600244 MPC2O95563 127 aa12.52□□□□□ -0.41
SSBP4-207ENST00000600244 GIPP09681 153 aaPredicted RBP12.52□□□□□ -0.41
SSBP4-207ENST00000600244 S100A10P60903 97 aa12.52□□□□□ -0.41
SSBP4-207ENST00000600244 Q5VSD8 79 aa12.52□□□□□ -0.41
SSBP4-207ENST00000600244 GBGT1Q8N5D6 347 aa12.52□□□□□ -0.41
SSBP4-207ENST00000600244 PINX1Q96BK5 328 aaKnown RBP12.52□□□□□ -0.41
SSBP4-207ENST00000600244 TXN2Q99757 166 aa12.52□□□□□ -0.41
SSBP4-207ENST00000600244 OR5AC2Q9NZP5 309 aa12.52□□□□□ -0.41
SSBP4-207ENST00000600244 TRAV14DV4A0A0A6YYC5 116 aa12.51□□□□□ -0.41
SSBP4-207ENST00000600244 OR2T8A6NH00 312 aa12.51□□□□□ -0.41
SSBP4-207ENST00000600244 DFFBO76075 338 aa12.51□□□□□ -0.41
SSBP4-207ENST00000600244 IGHV3-48P01763 117 aa12.51□□□□□ -0.41
SSBP4-207ENST00000600244 C4BPBP20851 252 aa12.51□□□□□ -0.41
SSBP4-207ENST00000600244 GPX4P36969 197 aaPredicted RBP12.51□□□□□ -0.41
SSBP4-207ENST00000600244 OPRK1P41145 380 aa12.51□□□□□ -0.41
SSBP4-207ENST00000600244 MFAP4P55083 255 aa12.51□□□□□ -0.41
SSBP4-207ENST00000600244 FAM3BP58499 235 aaPredicted RBP12.51□□□□□ -0.41
SSBP4-207ENST00000600244 DEFB131AP59861 70 aa12.51□□□□□ -0.41
SSBP4-207ENST00000600244 RAB11AP62491 216 aa12.51□□□□□ -0.41
SSBP4-207ENST00000600244 TRPT1Q86TN4 253 aaKnown RBP12.51□□□□□ -0.41
SSBP4-207ENST00000600244 BSCL2Q96G97 398 aaPredicted RBP12.51□□□□□ -0.41
SSBP4-207ENST00000600244 ZNF414Q96IQ9 312 aa12.51□□□□□ -0.41
SSBP4-207ENST00000600244 LYRM2Q9NU23 88 aaPredicted RBP12.51□□□□□ -0.41
SSBP4-207ENST00000600244 IGHV7-4-1A0A0J9YVY3 117 aa12.5□□□□□ -0.41
SSBP4-207ENST00000600244 NBDYA0A0U1RRE5 68 aa12.5□□□□□ -0.41
SSBP4-207ENST00000600244 RPS10-NUDT3A0A1W2PQS6 291 aa12.5□□□□□ -0.41
SSBP4-207ENST00000600244 L7N2F9 121 aa12.5□□□□□ -0.41
SSBP4-207ENST00000600244 SLC25A4P12235 298 aa12.5□□□□□ -0.41
SSBP4-207ENST00000600244 PVALBP20472 110 aaPredicted RBP12.5□□□□□ -0.41
SSBP4-207ENST00000600244 RAP2BP61225 183 aa12.5□□□□□ -0.41
SSBP4-207ENST00000600244 VAMP2P63027 116 aa12.5□□□□□ -0.41
SSBP4-207ENST00000600244 LRRC37A5PQ49AS3 106 aa12.5□□□□□ -0.41
SSBP4-207ENST00000600244 PRSS54Q6PEW0 395 aa12.5□□□□□ -0.41
SSBP4-207ENST00000600244 SPSB3Q6PJ21 355 aa12.5□□□□□ -0.41
SSBP4-207ENST00000600244 STHQ8IWL8 128 aa12.5□□□□□ -0.41
SSBP4-207ENST00000600244 TMEM116Q8NCL8 245 aa12.5□□□□□ -0.41
SSBP4-207ENST00000600244 OR4X1Q8NH49 305 aa12.5□□□□□ -0.41
SSBP4-207ENST00000600244 FAM24AA6NFZ4 105 aa12.49□□□□□ -0.41
SSBP4-207ENST00000600244 E5RGE8 158 aa12.49□□□□□ -0.41
SSBP4-207ENST00000600244 G3V3Q6 166 aa12.49□□□□□ -0.41
SSBP4-207ENST00000600244 CCNKO75909 580 aa12.49□□□□□ -0.41
SSBP4-207ENST00000600244 RLN2P04090 185 aa12.49□□□□□ -0.41
SSBP4-207ENST00000600244 CTSGP08311 255 aa12.49□□□□□ -0.41
SSBP4-207ENST00000600244 METTL15P1P0C7V9 234 aa12.49□□□□□ -0.41
SSBP4-207ENST00000600244 SPP1P10451 314 aa12.49□□□□□ -0.41
SSBP4-207ENST00000600244 XGP55808 180 aa12.49□□□□□ -0.41
SSBP4-207ENST00000600244 ARL16Q0P5N6 197 aa12.49□□□□□ -0.41
SSBP4-207ENST00000600244 Q5BKY6 102 aa12.49□□□□□ -0.41
SSBP4-207ENST00000600244 ETFRF1Q6IPR1 90 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms