RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 NEURL2Q9BR09 285 aa14.22□□□□□ -0.13
CCDC9-205ENST00000600117 PBDC1Q9BVG4 233 aa14.22□□□□□ -0.13
CCDC9-205ENST00000600117 RHPN1-AS1Q9BWJ2 59 aa14.22□□□□□ -0.13
CCDC9-205ENST00000600117 NPCDR1Q9BY65 106 aa14.22□□□□□ -0.13
CCDC9-205ENST00000600117 PARD6GQ9BYG4 376 aaPredicted RBP14.22□□□□□ -0.13
CCDC9-205ENST00000600117 VSIRQ9H7M9 311 aa14.22□□□□□ -0.13
CCDC9-205ENST00000600117 IGHV3OR16-13A0A075B7E8 117 aa14.21□□□□□ -0.13
CCDC9-205ENST00000600117 IGHV3-74A0A0B4J1X5 117 aa14.21□□□□□ -0.13
CCDC9-205ENST00000600117 C1QBP02746 253 aa14.21□□□□□ -0.13
CCDC9-205ENST00000600117 RPL29P47914 159 aaKnown RBP14.21□□□□□ -0.13
CCDC9-205ENST00000600117 MIC13Q5XKP0 118 aa14.21□□□□□ -0.13
CCDC9-205ENST00000600117 DYNLRB2Q8TF09 96 aa14.21□□□□□ -0.13
CCDC9-205ENST00000600117 ST8SIA2Q92186 375 aa14.21□□□□□ -0.13
CCDC9-205ENST00000600117 TECRQ9NZ01 308 aaKnown RBP14.21□□□□□ -0.13
CCDC9-205ENST00000600117 RABAC1Q9UI14 185 aa14.21□□□□□ -0.13
CCDC9-205ENST00000600117 SELENOKQ9Y6D0 94 aa14.21□□□□□ -0.13
CCDC9-205ENST00000600117 IFNA5P01569 189 aa14.2□□□□□ -0.14
CCDC9-205ENST00000600117 CXCL2P19875 107 aa14.2□□□□□ -0.14
CCDC9-205ENST00000600117 EIF2B2P49770 351 aaKnown RBP14.2□□□□□ -0.14
CCDC9-205ENST00000600117 EGFEM1PQ0D2K5 195 aa14.2□□□□□ -0.14
CCDC9-205ENST00000600117 ZNF345Q14585 488 aa14.2□□□□□ -0.14
CCDC9-205ENST00000600117 CD300EQ496F6 205 aaPredicted RBP14.2□□□□□ -0.14
CCDC9-205ENST00000600117 DEFB121Q5J5C9 76 aa14.2□□□□□ -0.14
CCDC9-205ENST00000600117 KCNRGQ8N5I3 272 aa14.2□□□□□ -0.14
CCDC9-205ENST00000600117 IGHV3-66A0A0C4DH42 116 aa14.19□□□□□ -0.14
CCDC9-205ENST00000600117 IZUMO1RA6ND01 250 aa14.19□□□□□ -0.14
CCDC9-205ENST00000600117 ORM2P19652 201 aa14.19□□□□□ -0.14
CCDC9-205ENST00000600117 PATE2Q6UY27 113 aa14.19□□□□□ -0.14
CCDC9-205ENST00000600117 OR1B1Q8NGR6 318 aa14.19□□□□□ -0.14
CCDC9-205ENST00000600117 OR2K2Q8NGT1 345 aa14.19□□□□□ -0.14
CCDC9-205ENST00000600117 DOK5Q9P104 306 aa14.19□□□□□ -0.14
CCDC9-205ENST00000600117 PXMP4Q9Y6I8 212 aa14.19□□□□□ -0.14
CCDC9-205ENST00000600117 DNAH1Q9P2D7 4330 aa14.19□□□□□ -0.14
CCDC9-205ENST00000600117 TENM2Q9NT68 2774 aa14.19□□□□□ -0.14
CCDC9-205ENST00000600117 BUB3O43684 328 aa14.18□□□□□ -0.14
CCDC9-205ENST00000600117 KRTAP10-11P60412 298 aa14.18□□□□□ -0.14
CCDC9-205ENST00000600117 PXDC1Q5TGL8 231 aa14.18□□□□□ -0.14
CCDC9-205ENST00000600117 FAM90A2PQ658T7 463 aa14.18□□□□□ -0.14
CCDC9-205ENST00000600117 TMEM61Q8N0U2 210 aa14.18□□□□□ -0.14
CCDC9-205ENST00000600117 SCGB1C1Q8TD33 95 aa14.18□□□□□ -0.14
CCDC9-205ENST00000600117 RNF2Q99496 336 aa14.18□□□□□ -0.14
CCDC9-205ENST00000600117 RSG1Q9BU20 258 aa14.18□□□□□ -0.14
CCDC9-205ENST00000600117 ARL6Q9H0F7 186 aa14.18□□□□□ -0.14
CCDC9-205ENST00000600117 SLC39A9Q9NUM3 307 aa14.18□□□□□ -0.14
CCDC9-205ENST00000600117 LYSTQ99698 3801 aa14.17□□□□□ -0.14
CCDC9-205ENST00000600117 A0A1W2PS18 150 aa14.17□□□□□ -0.14
CCDC9-205ENST00000600117 HYPMO75409 117 aa14.17□□□□□ -0.14
CCDC9-205ENST00000600117 BMI1P35226 326 aa14.17□□□□□ -0.14
CCDC9-205ENST00000600117 B2MP61769 119 aa14.17□□□□□ -0.14
CCDC9-205ENST00000600117 ZNF266Q14584 549 aa14.17□□□□□ -0.14
CCDC9-205ENST00000600117 RPL7L1Q6DKI1 246 aaKnown RBP14.17□□□□□ -0.14
CCDC9-205ENST00000600117 C16orf54Q6UWD8 224 aa14.17□□□□□ -0.14
CCDC9-205ENST00000600117 GLMPQ8WWB7 406 aa14.17□□□□□ -0.14
CCDC9-205ENST00000600117 B9D2Q9BPU9 175 aa14.17□□□□□ -0.14
CCDC9-205ENST00000600117 TMEM231Q9H6L2 316 aa14.17□□□□□ -0.14
CCDC9-205ENST00000600117 CYTL1Q9NRR1 136 aa14.17□□□□□ -0.14
CCDC9-205ENST00000600117 RFNGQ9Y644 331 aa14.17□□□□□ -0.14
CCDC9-205ENST00000600117 A0A0D9SG52 128 aa14.16□□□□□ -0.14
CCDC9-205ENST00000600117 H3BRN7 92 aa14.16□□□□□ -0.14
CCDC9-205ENST00000600117 ZNF709Q8N972 641 aa14.16□□□□□ -0.14
CCDC9-205ENST00000600117 TMEM37Q8WXS4 190 aa14.16□□□□□ -0.14
CCDC9-205ENST00000600117 NARS2Q96I59 477 aaKnown RBP14.16□□□□□ -0.14
CCDC9-205ENST00000600117 HIGD1AQ9Y241 93 aa14.16□□□□□ -0.14
CCDC9-205ENST00000600117 TRAV25A0A0B4J276 109 aa14.15□□□□□ -0.14
CCDC9-205ENST00000600117 ZNF785A8K8V0 405 aa14.15□□□□□ -0.14
CCDC9-205ENST00000600117 C17orf112F2Z3M2 114 aa14.15□□□□□ -0.14
CCDC9-205ENST00000600117 TAAR5O14804 337 aa14.15□□□□□ -0.14
CCDC9-205ENST00000600117 OR5G3P0C626 314 aa14.15□□□□□ -0.14
CCDC9-205ENST00000600117 LGALSLQ3ZCW2 172 aaPredicted RBP14.15□□□□□ -0.14
CCDC9-205ENST00000600117 LCN12Q6JVE5 192 aa14.15□□□□□ -0.14
CCDC9-205ENST00000600117 Q6ZRG5 221 aa14.15□□□□□ -0.14
CCDC9-205ENST00000600117 HYLS1Q96M11 299 aa14.15□□□□□ -0.14
CCDC9-205ENST00000600117 UHRF2Q96PU4 802 aa14.15□□□□□ -0.14
CCDC9-205ENST00000600117 SHANK2-AS3Q9BTD1 123 aa14.15□□□□□ -0.14
CCDC9-205ENST00000600117 SLC25A39Q9BZJ4 359 aaPredicted RBP14.15□□□□□ -0.14
CCDC9-205ENST00000600117 ARV1Q9H2C2 271 aa14.15□□□□□ -0.14
CCDC9-205ENST00000600117 KCNIP2Q9NS61 270 aa14.15□□□□□ -0.14
CCDC9-205ENST00000600117 TIMM9Q9Y5J7 89 aa14.15□□□□□ -0.14
CCDC9-205ENST00000600117 SORL1Q92673 2214 aa14.14□□□□□ -0.15
CCDC9-205ENST00000600117 TCF24Q7RTU0 167 aa14.14□□□□□ -0.15
CCDC9-205ENST00000600117 HSD17B11Q8NBQ5 300 aa14.14□□□□□ -0.15
CCDC9-205ENST00000600117 GRAMD2BQ96HH9 432 aa14.14□□□□□ -0.15
CCDC9-205ENST00000600117 ARPC5LQ9BPX5 153 aa14.14□□□□□ -0.15
CCDC9-205ENST00000600117 SCRT1Q9BWW7 348 aa14.14□□□□□ -0.15
CCDC9-205ENST00000600117 PFDN2Q9UHV9 154 aa14.14□□□□□ -0.15
CCDC9-205ENST00000600117 ELOA3CA0A087WX78 387 aaPredicted RBP14.13□□□□□ -0.15
CCDC9-205ENST00000600117 BORCS7-ASMTA0A0B4J1R7 106 aa14.13□□□□□ -0.15
CCDC9-205ENST00000600117 ZNF98A6NK75 572 aa14.13□□□□□ -0.15
CCDC9-205ENST00000600117 TSPAN4O14817 238 aa14.13□□□□□ -0.15
CCDC9-205ENST00000600117 BCL2L11O43521 198 aa14.13□□□□□ -0.15
CCDC9-205ENST00000600117 COX7A2P2O60397 106 aa14.13□□□□□ -0.15
CCDC9-205ENST00000600117 ATP6V0CP27449 155 aa14.13□□□□□ -0.15
CCDC9-205ENST00000600117 ZFP69Q49AA0 526 aa14.13□□□□□ -0.15
CCDC9-205ENST00000600117 GCSAMLQ5JQS6 135 aa14.13□□□□□ -0.15
CCDC9-205ENST00000600117 C1orf194Q5T5A4 169 aa14.13□□□□□ -0.15
CCDC9-205ENST00000600117 LAMTOR1Q6IAA8 161 aa14.13□□□□□ -0.15
CCDC9-205ENST00000600117 TMUB2Q71RG4 321 aa14.13□□□□□ -0.15
CCDC9-205ENST00000600117 PPP1R14BQ96C90 147 aa14.13□□□□□ -0.15
CCDC9-205ENST00000600117 DNAJC4Q9NNZ3 241 aa14.13□□□□□ -0.15
CCDC9-205ENST00000600117 ZNF256Q9Y2P7 627 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms