RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 SGMS2Q8NHU3 365 aa11.97□□□□□ -0.49
VRK3-218ENST00000600031 UHRF2Q96PU4 802 aa11.97□□□□□ -0.49
VRK3-218ENST00000600031 SRSF8Q9BRL6 282 aaKnown RBP11.97□□□□□ -0.49
VRK3-218ENST00000600031 LY96Q9Y6Y9 160 aa11.97□□□□□ -0.49
VRK3-218ENST00000600031 MYO9AB2RTY4 2548 aa11.97□□□□□ -0.49
VRK3-218ENST00000600031 SCO2A0A1W2PP80 73 aa11.96□□□□□ -0.49
VRK3-218ENST00000600031 A6NDX4 124 aa11.96□□□□□ -0.49
VRK3-218ENST00000600031 AMY1AP04745 511 aa11.96□□□□□ -0.49
VRK3-218ENST00000600031 GBGT1Q8N5D6 347 aa11.96□□□□□ -0.49
VRK3-218ENST00000600031 STPG3Q8N7X2 389 aa11.96□□□□□ -0.49
VRK3-218ENST00000600031 C11orf52Q96A22 123 aa11.96□□□□□ -0.49
VRK3-218ENST00000600031 AURKAIP1Q9NWT8 199 aaPredicted RBP11.96□□□□□ -0.49
VRK3-218ENST00000600031 MOB4Q9Y3A3 225 aa11.96□□□□□ -0.49
VRK3-218ENST00000600031 ARL2-SNX15V9GYD0 113 aa11.96□□□□□ -0.49
VRK3-218ENST00000600031 TRBV20OR9-2A0A075B6H5 130 aa11.96□□□□□ -0.5
VRK3-218ENST00000600031 EGR2P11161 476 aaPredicted RBP11.96□□□□□ -0.5
VRK3-218ENST00000600031 YPEL3P61236 119 aaPredicted RBP11.96□□□□□ -0.5
VRK3-218ENST00000600031 CD69Q07108 199 aa11.96□□□□□ -0.5
VRK3-218ENST00000600031 LBHQ53QV2 105 aaPredicted RBP11.96□□□□□ -0.5
VRK3-218ENST00000600031 ASPHD1Q5U4P2 390 aa11.96□□□□□ -0.5
VRK3-218ENST00000600031 PVRIGQ6DKI7 326 aa11.96□□□□□ -0.5
VRK3-218ENST00000600031 C9orf139Q6ZV77 190 aa11.96□□□□□ -0.5
VRK3-218ENST00000600031 FNDC4Q9H6D8 234 aaPredicted RBP11.96□□□□□ -0.5
VRK3-218ENST00000600031 YTHDF2Q9Y5A9 579 aaKnown RBP11.96□□□□□ -0.5
VRK3-218ENST00000600031 F11RQ9Y624 299 aaKnown RBP11.96□□□□□ -0.5
VRK3-218ENST00000600031 ACANP16112 2415 aa11.96□□□□□ -0.5
VRK3-218ENST00000600031 C9JCJ5 164 aa11.95□□□□□ -0.5
VRK3-218ENST00000600031 PRR20EP86478 221 aa11.95□□□□□ -0.5
VRK3-218ENST00000600031 PRR20CP86479 221 aa11.95□□□□□ -0.5
VRK3-218ENST00000600031 PRR20DP86480 221 aa11.95□□□□□ -0.5
VRK3-218ENST00000600031 PRR20BP86481 221 aa11.95□□□□□ -0.5
VRK3-218ENST00000600031 PRR20AP86496 221 aa11.95□□□□□ -0.5
VRK3-218ENST00000600031 TEX38Q6PEX7 206 aa11.95□□□□□ -0.5
VRK3-218ENST00000600031 ZNF600Q6ZNG1 722 aa11.95□□□□□ -0.5
VRK3-218ENST00000600031 OCC1Q8TAD7 63 aa11.95□□□□□ -0.5
VRK3-218ENST00000600031 PGPEP1LA6NFU8 196 aa11.95□□□□□ -0.5
VRK3-218ENST00000600031 LINC01548A6NM66 108 aa11.95□□□□□ -0.5
VRK3-218ENST00000600031 IQCJQ1A5X6 159 aa11.95□□□□□ -0.5
VRK3-218ENST00000600031 IL17RELQ6ZVW7 336 aa11.95□□□□□ -0.5
VRK3-218ENST00000600031 ZNF664Q8N3J9 261 aa11.95□□□□□ -0.5
VRK3-218ENST00000600031 WNT10AQ9GZT5 417 aa11.95□□□□□ -0.5
VRK3-218ENST00000600031 MXRA5Q9NR99 2828 aa11.94□□□□□ -0.5
VRK3-218ENST00000600031 ZNF705GA8MUZ8 300 aaPredicted RBP11.94□□□□□ -0.5
VRK3-218ENST00000600031 A8MWP6 167 aa11.94□□□□□ -0.5
VRK3-218ENST00000600031 IGHV3-48P01763 117 aa11.94□□□□□ -0.5
VRK3-218ENST00000600031 IGHV4-59P01825 116 aa11.94□□□□□ -0.5
VRK3-218ENST00000600031 OR2T6Q8NHC8 308 aa11.94□□□□□ -0.5
VRK3-218ENST00000600031 MISP3Q96FF7 219 aa11.94□□□□□ -0.5
VRK3-218ENST00000600031 ZNF48Q96MX3 618 aaPredicted RBP11.94□□□□□ -0.5
VRK3-218ENST00000600031 SEPSECSQ9HD40 501 aaKnown RBP11.94□□□□□ -0.5
VRK3-218ENST00000600031 IL36BQ9NZH7 164 aa11.94□□□□□ -0.5
VRK3-218ENST00000600031 IER3P46695 156 aa11.93□□□□□ -0.5
VRK3-218ENST00000600031 TMEM167BQ9NRX6 74 aa11.93□□□□□ -0.5
VRK3-218ENST00000600031 ATP6V0E1O15342 81 aa11.93□□□□□ -0.5
VRK3-218ENST00000600031 CD5LO43866 347 aa11.93□□□□□ -0.5
VRK3-218ENST00000600031 CRYGCP07315 174 aa11.93□□□□□ -0.5
VRK3-218ENST00000600031 CACNG8Q8WXS5 425 aa11.93□□□□□ -0.5
VRK3-218ENST00000600031 MRPL36Q9P0J6 103 aaKnown RBP11.93□□□□□ -0.5
VRK3-218ENST00000600031 SLC45A2Q9UMX9 530 aa11.93□□□□□ -0.5
VRK3-218ENST00000600031 LINC00869P0C866 280 aa11.92□□□□□ -0.5
VRK3-218ENST00000600031 SSTP61278 116 aa11.92□□□□□ -0.5
VRK3-218ENST00000600031 SPATA31B1PQ5VZV4 182 aa11.92□□□□□ -0.5
VRK3-218ENST00000600031 SLC35E1Q96K37 410 aa11.92□□□□□ -0.5
VRK3-218ENST00000600031 NDUFAF3Q9BU61 184 aa11.92□□□□□ -0.5
VRK3-218ENST00000600031 C19orf24Q9BVV8 132 aa11.92□□□□□ -0.5
VRK3-218ENST00000600031 IGKV1OR2-108A0A075B7D4 117 aa11.92□□□□□ -0.5
VRK3-218ENST00000600031 IGHV3-21A0A0B4J1V1 117 aa11.92□□□□□ -0.5
VRK3-218ENST00000600031 NPIPB5A8MRT5 1133 aa11.92□□□□□ -0.5
VRK3-218ENST00000600031 SELENOTP62341 195 aa11.92□□□□□ -0.5
VRK3-218ENST00000600031 ZNF90Q03938 601 aa11.92□□□□□ -0.5
VRK3-218ENST00000600031 Q6YL49 198 aa11.92□□□□□ -0.5
VRK3-218ENST00000600031 TTC9CQ8N5M4 171 aa11.92□□□□□ -0.5
VRK3-218ENST00000600031 SONP18583 2426 aaKnown RBP11.92□□□□□ -0.5
VRK3-218ENST00000600031 ADMP35318 185 aa11.91□□□□□ -0.5
VRK3-218ENST00000600031 TNFRSF19Q9NS68 423 aa11.91□□□□□ -0.5
VRK3-218ENST00000600031 TECRQ9NZ01 308 aaKnown RBP11.91□□□□□ -0.5
VRK3-218ENST00000600031 CORTO00230 105 aa11.9□□□□□ -0.5
VRK3-218ENST00000600031 BLCAPP62952 87 aa11.9□□□□□ -0.5
VRK3-218ENST00000600031 C2orf88Q9BSF0 95 aa11.9□□□□□ -0.5
VRK3-218ENST00000600031 YAE1D1Q9NRH1 226 aa11.9□□□□□ -0.5
VRK3-218ENST00000600031 K7EN84 100 aa11.9□□□□□ -0.5
VRK3-218ENST00000600031 HNF1AP20823 631 aa11.9□□□□□ -0.5
VRK3-218ENST00000600031 RPL19P84098 196 aaKnown RBP11.9□□□□□ -0.5
VRK3-218ENST00000600031 ECSCRQ19T08 205 aa11.9□□□□□ -0.5
VRK3-218ENST00000600031 UNQ5815/PRO19632Q6UWF5 114 aa11.9□□□□□ -0.5
VRK3-218ENST00000600031 PQLC2Q6ZP29 291 aa11.9□□□□□ -0.5
VRK3-218ENST00000600031 MIR17HGQ75NE6 70 aa11.9□□□□□ -0.5
VRK3-218ENST00000600031 NPIPB3Q92617 1050 aa11.9□□□□□ -0.5
VRK3-218ENST00000600031 FANCD2OSQ96PS1 177 aa11.9□□□□□ -0.5
VRK3-218ENST00000600031 OTOGQ6ZRI0 2925 aa11.89□□□□□ -0.51
VRK3-218ENST00000600031 ANK3Q12955 4377 aaKnown RBP11.89□□□□□ -0.51
VRK3-218ENST00000600031 G3V318 75 aa11.89□□□□□ -0.51
VRK3-218ENST00000600031 I3L2K1 104 aa11.89□□□□□ -0.51
VRK3-218ENST00000600031 TAS2R45P59539 299 aa11.89□□□□□ -0.51
VRK3-218ENST00000600031 RPEL1Q2QD12 228 aa11.89□□□□□ -0.51
VRK3-218ENST00000600031 Q6ZS46 218 aa11.89□□□□□ -0.51
VRK3-218ENST00000600031 TMEM256Q8N2U0 113 aa11.89□□□□□ -0.51
VRK3-218ENST00000600031 TMUB1Q9BVT8 246 aa11.89□□□□□ -0.51
VRK3-218ENST00000600031 TRBV9A0A0B4J1U6 114 aa11.89□□□□□ -0.51
VRK3-218ENST00000600031 M0QZK8 103 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms