RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-222	ENST00000599144	PRB4	P10163	310 aa	Predicted RBP	13.54	□□□□□ -0.24
IRF3-222	ENST00000599144	SUPT4H1	P63272	117 aa	Known RBP	13.54	□□□□□ -0.24
IRF3-222	ENST00000599144	IGFL4	Q6B9Z1	124 aa		13.54	□□□□□ -0.24
IRF3-222	ENST00000599144	OR8G2P	Q6IF36	304 aa		13.54	□□□□□ -0.24
IRF3-222	ENST00000599144	EBLN2	Q6P2I7	272 aa		13.54	□□□□□ -0.24
IRF3-222	ENST00000599144	OR4C16	Q8NGL9	310 aa		13.54	□□□□□ -0.24
IRF3-222	ENST00000599144	C17orf77	Q96MU5	243 aa		13.54	□□□□□ -0.24
IRF3-222	ENST00000599144	TMED3	Q9Y3Q3	217 aa		13.54	□□□□□ -0.24
IRF3-222	ENST00000599144	ZNF182	P17025	639 aa	Predicted RBP	13.53	□□□□□ -0.24
IRF3-222	ENST00000599144	PAX9	P55771	341 aa		13.53	□□□□□ -0.24
IRF3-222	ENST00000599144	OXA1L	Q15070	435 aa		13.53	□□□□□ -0.24
IRF3-222	ENST00000599144	FCN2	Q15485	313 aa		13.53	□□□□□ -0.24
IRF3-222	ENST00000599144	LYZL2	Q7Z4W2	148 aa		13.53	□□□□□ -0.24
IRF3-222	ENST00000599144	MAPKAPK5-AS1	Q8N8E1	139 aa		13.53	□□□□□ -0.24
IRF3-222	ENST00000599144	TMEM208	Q9BTX3	173 aa		13.53	□□□□□ -0.24
IRF3-222	ENST00000599144	DISC1	C4P0D8	188 aa		13.52	□□□□□ -0.25
IRF3-222	ENST00000599144	GABARAP	H6UMI1	98 aa		13.52	□□□□□ -0.25
IRF3-222	ENST00000599144	ZNF701	M0R085	212 aa	Predicted RBP	13.52	□□□□□ -0.25
IRF3-222	ENST00000599144	AMTN	Q6UX39	209 aa		13.52	□□□□□ -0.25
IRF3-222	ENST00000599144	NOXA1	Q86UR1	476 aa		13.52	□□□□□ -0.25
IRF3-222	ENST00000599144	OR8I2	Q8N0Y5	310 aa		13.52	□□□□□ -0.25
IRF3-222	ENST00000599144	OR51S1	Q8NGJ8	323 aa		13.52	□□□□□ -0.25
IRF3-222	ENST00000599144	AP3S1	Q92572	193 aa		13.52	□□□□□ -0.25
IRF3-222	ENST00000599144	SLC35E1	Q96K37	410 aa		13.52	□□□□□ -0.25
IRF3-222	ENST00000599144	C16orf92	Q96LL3	132 aa		13.52	□□□□□ -0.25
IRF3-222	ENST00000599144	CLUHP3	Q96NS8	147 aa		13.52	□□□□□ -0.25
IRF3-222	ENST00000599144	ATG101	Q9BSB4	218 aa		13.52	□□□□□ -0.25
IRF3-222	ENST00000599144	SLC25A32	Q9H2D1	315 aa		13.52	□□□□□ -0.25
IRF3-222	ENST00000599144	HSPB7	Q9UBY9	170 aa		13.52	□□□□□ -0.25
IRF3-222	ENST00000599144	RSL24D1	Q9UHA3	163 aa	Known RBP	13.52	□□□□□ -0.25
IRF3-222	ENST00000599144		U3KQ87	197 aa		13.52	□□□□□ -0.25
IRF3-222	ENST00000599144		H3BMQ9	156 aa		13.51	□□□□□ -0.25
IRF3-222	ENST00000599144		M0R2Z0	102 aa		13.51	□□□□□ -0.25
IRF3-222	ENST00000599144	CTDSP2	O14595	271 aa		13.51	□□□□□ -0.25
IRF3-222	ENST00000599144	DEFB130B	P0DP73	79 aa		13.51	□□□□□ -0.25
IRF3-222	ENST00000599144	DEFB130A	P0DP74	79 aa		13.51	□□□□□ -0.25
IRF3-222	ENST00000599144	NUP62	P37198	522 aa	Predicted RBP	13.51	□□□□□ -0.25
IRF3-222	ENST00000599144	SPCS2	Q15005	226 aa		13.51	□□□□□ -0.25
IRF3-222	ENST00000599144	SPINK13	Q1W4C9	94 aa		13.51	□□□□□ -0.25
IRF3-222	ENST00000599144	SLC25A22	Q9H936	323 aa		13.51	□□□□□ -0.25
IRF3-222	ENST00000599144	DOK5	Q9P104	306 aa		13.51	□□□□□ -0.25
IRF3-222	ENST00000599144	PAIP2B	Q9ULR5	123 aa	Known RBP	13.51	□□□□□ -0.25
IRF3-222	ENST00000599144	APOB	P04114	4563 aa	Known RBP	13.5	□□□□□ -0.25
IRF3-222	ENST00000599144	IGKV1OR2-108	A0A075B7D4	117 aa		13.5	□□□□□ -0.25
IRF3-222	ENST00000599144	ISLR	O14498	428 aa		13.5	□□□□□ -0.25
IRF3-222	ENST00000599144	RGS5	O15539	181 aa		13.5	□□□□□ -0.25
IRF3-222	ENST00000599144	NUDT3	O95989	172 aa		13.5	□□□□□ -0.25
IRF3-222	ENST00000599144	IAPP	P10997	89 aa		13.5	□□□□□ -0.25
IRF3-222	ENST00000599144	SMCO1	Q147U7	214 aa		13.5	□□□□□ -0.25
IRF3-222	ENST00000599144	SURF2	Q15527	256 aa	Predicted RBP	13.5	□□□□□ -0.25
IRF3-222	ENST00000599144	RSG1	Q9BU20	258 aa		13.5	□□□□□ -0.25
IRF3-222	ENST00000599144	RBM38	Q9H0Z9	239 aa	Known RBP	13.5	□□□□□ -0.25
IRF3-222	ENST00000599144	PFDN2	Q9UHV9	154 aa		13.5	□□□□□ -0.25
IRF3-222	ENST00000599144	NACA	E9PAV3	2078 aa		13.49	□□□□□ -0.25
IRF3-222	ENST00000599144	NBDY	A0A0U1RRE5	68 aa		13.49	□□□□□ -0.25
IRF3-222	ENST00000599144	SNRPGP15	A8MWD9	76 aa		13.49	□□□□□ -0.25
IRF3-222	ENST00000599144	AZU1	P20160	251 aa		13.49	□□□□□ -0.25
IRF3-222	ENST00000599144	GATA2	P23769	480 aa	Predicted RBP	13.49	□□□□□ -0.25
IRF3-222	ENST00000599144	CCR6	P51684	374 aa		13.49	□□□□□ -0.25
IRF3-222	ENST00000599144	C1orf194	Q5T5A4	169 aa		13.49	□□□□□ -0.25
IRF3-222	ENST00000599144	BAP18	Q8IXM2	172 aa		13.49	□□□□□ -0.25
IRF3-222	ENST00000599144	ZNRF2	Q8NHG8	242 aa		13.49	□□□□□ -0.25
IRF3-222	ENST00000599144	IGF2BP2-AS1	Q96M15	143 aa		13.49	□□□□□ -0.25
IRF3-222	ENST00000599144	RPRM	Q9NS64	109 aa		13.49	□□□□□ -0.25
IRF3-222	ENST00000599144	DNAH5	Q8TE73	4624 aa		13.48	□□□□□ -0.25
IRF3-222	ENST00000599144		F5H768	121 aa		13.48	□□□□□ -0.25
IRF3-222	ENST00000599144	CRX	O43186	299 aa	Predicted RBP	13.48	□□□□□ -0.25
IRF3-222	ENST00000599144	AKAIN1	P0CW23	69 aa		13.48	□□□□□ -0.25
IRF3-222	ENST00000599144	AKR1C4	P17516	323 aa		13.48	□□□□□ -0.25
IRF3-222	ENST00000599144	GPX4	P36969	197 aa	Predicted RBP	13.48	□□□□□ -0.25
IRF3-222	ENST00000599144	CNN1	P51911	297 aa	Known RBP	13.48	□□□□□ -0.25
IRF3-222	ENST00000599144	SPATA31B1P	Q5VZV4	182 aa		13.48	□□□□□ -0.25
IRF3-222	ENST00000599144	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.48	□□□□□ -0.25
IRF3-222	ENST00000599144	TMEM182	Q6ZP80	229 aa	Predicted RBP	13.48	□□□□□ -0.25
IRF3-222	ENST00000599144	C6orf223	Q8N319	242 aa		13.48	□□□□□ -0.25
IRF3-222	ENST00000599144	RNF182	Q8N6D2	247 aa		13.48	□□□□□ -0.25
IRF3-222	ENST00000599144	OR11H7	Q8NGC8	314 aa		13.48	□□□□□ -0.25
IRF3-222	ENST00000599144	OR1S1	Q8NH92	325 aa		13.48	□□□□□ -0.25
IRF3-222	ENST00000599144	SMIM4	Q8WVI0	70 aa		13.48	□□□□□ -0.25
IRF3-222	ENST00000599144	IL22RA2	Q969J5	263 aa		13.48	□□□□□ -0.25
IRF3-222	ENST00000599144	TRAV12-2	A0A075B6T6	113 aa		13.47	□□□□□ -0.25
IRF3-222	ENST00000599144	C15orf53	Q8NAA6	179 aa		13.47	□□□□□ -0.25
IRF3-222	ENST00000599144	C15orf40	Q8WUR7	153 aa		13.47	□□□□□ -0.25
IRF3-222	ENST00000599144	CCDC59	Q9P031	241 aa	Known RBP	13.47	□□□□□ -0.25
IRF3-222	ENST00000599144	TRAV8-2	A0A0B4J237	113 aa		13.46	□□□□□ -0.25
IRF3-222	ENST00000599144		A0A0B4J2A0	478 aa		13.46	□□□□□ -0.25
IRF3-222	ENST00000599144		A8MTW9	85 aa		13.46	□□□□□ -0.25
IRF3-222	ENST00000599144	CDK2AP2	O75956	126 aa		13.46	□□□□□ -0.25
IRF3-222	ENST00000599144	DYNC2LI1	Q8TCX1	351 aa		13.46	□□□□□ -0.25
IRF3-222	ENST00000599144	TRGV9	Q99603	122 aa		13.46	□□□□□ -0.25
IRF3-222	ENST00000599144	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.46	□□□□□ -0.25
IRF3-222	ENST00000599144	BATF3	Q9NR55	127 aa		13.46	□□□□□ -0.25
IRF3-222	ENST00000599144	SHPK	Q9UHJ6	478 aa		13.46	□□□□□ -0.25
IRF3-222	ENST00000599144	KCNIP3	Q9Y2W7	256 aa		13.46	□□□□□ -0.25
IRF3-222	ENST00000599144	LINC00588	Q9Y4M8	146 aa		13.46	□□□□□ -0.25
IRF3-222	ENST00000599144	PLAC8L1	A1L4L8	177 aa		13.45	□□□□□ -0.26
IRF3-222	ENST00000599144	ZNF98	A6NK75	572 aa		13.45	□□□□□ -0.26
IRF3-222	ENST00000599144	INS	P01308	110 aa		13.45	□□□□□ -0.26
IRF3-222	ENST00000599144	ORM2	P19652	201 aa		13.45	□□□□□ -0.26
IRF3-222	ENST00000599144	GALR1	P47211	349 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms