RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 AKR1C1Q04828 323 aa13□□□□□ -0.33
USHBP1-209ENST00000598570 OR2F1Q13607 317 aa13□□□□□ -0.33
USHBP1-209ENST00000598570 TEPPQ6URK8 271 aa13□□□□□ -0.33
USHBP1-209ENST00000598570 SIGLEC15Q6ZMC9 328 aa13□□□□□ -0.33
USHBP1-209ENST00000598570 NRN1Q9NPD7 142 aa13□□□□□ -0.33
USHBP1-209ENST00000598570 IGSF23A1L1A6 192 aa12.99□□□□□ -0.33
USHBP1-209ENST00000598570 FAM24AA6NFZ4 105 aa12.99□□□□□ -0.33
USHBP1-209ENST00000598570 SOCS3O14543 225 aa12.99□□□□□ -0.33
USHBP1-209ENST00000598570 SIX6O95475 246 aa12.99□□□□□ -0.33
USHBP1-209ENST00000598570 GATA2P23769 480 aaPredicted RBP12.99□□□□□ -0.33
USHBP1-209ENST00000598570 TFPI2P48307 235 aa12.99□□□□□ -0.33
USHBP1-209ENST00000598570 PXDC1Q5TGL8 231 aa12.99□□□□□ -0.33
USHBP1-209ENST00000598570 APRG1Q8IVJ8 170 aa12.99□□□□□ -0.33
USHBP1-209ENST00000598570 OVOL2Q9BRP0 275 aa12.99□□□□□ -0.33
USHBP1-209ENST00000598570 RNF126Q9BV68 326 aa12.99□□□□□ -0.33
USHBP1-209ENST00000598570 IGKV3-7A0A075B6H7 116 aa12.98□□□□□ -0.33
USHBP1-209ENST00000598570 ZNF98A6NK75 572 aa12.98□□□□□ -0.33
USHBP1-209ENST00000598570 GOSR2O14653 212 aa12.98□□□□□ -0.33
USHBP1-209ENST00000598570 LINC00869P0C866 280 aa12.98□□□□□ -0.33
USHBP1-209ENST00000598570 S100A11P31949 105 aa12.98□□□□□ -0.33
USHBP1-209ENST00000598570 APOC4P55056 127 aa12.98□□□□□ -0.33
USHBP1-209ENST00000598570 LYZP61626 148 aa12.98□□□□□ -0.33
USHBP1-209ENST00000598570 RPL11P62913 178 aaKnown RBP12.98□□□□□ -0.33
USHBP1-209ENST00000598570 ZNF124Q15973 351 aa12.98□□□□□ -0.33
USHBP1-209ENST00000598570 PBDC1Q9BVG4 233 aa12.98□□□□□ -0.33
USHBP1-209ENST00000598570 MGAT4CQ9UBM8 478 aa12.98□□□□□ -0.33
USHBP1-209ENST00000598570 WDR83OSQ9Y284 106 aa12.98□□□□□ -0.33
USHBP1-209ENST00000598570 AGRNO00468 2067 aa12.98□□□□□ -0.33
USHBP1-209ENST00000598570 E5RGE8 158 aa12.97□□□□□ -0.33
USHBP1-209ENST00000598570 DEFB131AP59861 70 aa12.97□□□□□ -0.33
USHBP1-209ENST00000598570 RRAS2P62070 204 aaPredicted RBP12.97□□□□□ -0.33
USHBP1-209ENST00000598570 SLC38A11Q08AI6 406 aa12.97□□□□□ -0.33
USHBP1-209ENST00000598570 ATP6V1FQ16864 119 aa12.97□□□□□ -0.33
USHBP1-209ENST00000598570 PATE2Q6UY27 113 aa12.97□□□□□ -0.33
USHBP1-209ENST00000598570 STXBP6Q8NFX7 210 aa12.97□□□□□ -0.33
USHBP1-209ENST00000598570 GPR82Q96P67 336 aa12.97□□□□□ -0.33
USHBP1-209ENST00000598570 MGST2Q99735 147 aa12.97□□□□□ -0.33
USHBP1-209ENST00000598570 SHANK2-AS3Q9BTD1 123 aa12.97□□□□□ -0.33
USHBP1-209ENST00000598570 H3BRN7 92 aa12.96□□□□□ -0.33
USHBP1-209ENST00000598570 AGPAT2O15120 278 aa12.96□□□□□ -0.33
USHBP1-209ENST00000598570 HYPMO75409 117 aa12.96□□□□□ -0.33
USHBP1-209ENST00000598570 CST7O76096 145 aa12.96□□□□□ -0.33
USHBP1-209ENST00000598570 S100A7P31151 101 aa12.96□□□□□ -0.33
USHBP1-209ENST00000598570 CAV2P51636 162 aa12.96□□□□□ -0.33
USHBP1-209ENST00000598570 PRR20EP86478 221 aa12.96□□□□□ -0.33
USHBP1-209ENST00000598570 PRR20CP86479 221 aa12.96□□□□□ -0.33
USHBP1-209ENST00000598570 PRR20DP86480 221 aa12.96□□□□□ -0.33
USHBP1-209ENST00000598570 PRR20BP86481 221 aa12.96□□□□□ -0.33
USHBP1-209ENST00000598570 PRR20AP86496 221 aa12.96□□□□□ -0.33
USHBP1-209ENST00000598570 RNF183Q96D59 192 aa12.96□□□□□ -0.33
USHBP1-209ENST00000598570 CLUHP3Q96NS8 147 aa12.96□□□□□ -0.33
USHBP1-209ENST00000598570 RLN2P04090 185 aa12.95□□□□□ -0.34
USHBP1-209ENST00000598570 GIG44P09565 113 aaPredicted RBP12.95□□□□□ -0.34
USHBP1-209ENST00000598570 LYL1P12980 280 aa12.95□□□□□ -0.34
USHBP1-209ENST00000598570 BCAP31P51572 246 aa12.95□□□□□ -0.34
USHBP1-209ENST00000598570 S100A10P60903 97 aa12.95□□□□□ -0.34
USHBP1-209ENST00000598570 SAMD13Q5VXD3 122 aa12.95□□□□□ -0.34
USHBP1-209ENST00000598570 TRPT1Q86TN4 253 aaKnown RBP12.95□□□□□ -0.34
USHBP1-209ENST00000598570 ZNF546Q86UE3 836 aa12.95□□□□□ -0.34
USHBP1-209ENST00000598570 PPP1R1CQ8WVI7 109 aa12.95□□□□□ -0.34
USHBP1-209ENST00000598570 SLC25A39Q9BZJ4 359 aaPredicted RBP12.95□□□□□ -0.34
USHBP1-209ENST00000598570 CSTL1Q9H114 145 aa12.95□□□□□ -0.34
USHBP1-209ENST00000598570 OR5AC2Q9NZP5 309 aa12.95□□□□□ -0.34
USHBP1-209ENST00000598570 ALG5Q9Y673 324 aa12.95□□□□□ -0.34
USHBP1-209ENST00000598570 CSMD3Q7Z407 3707 aa12.94□□□□□ -0.34
USHBP1-209ENST00000598570 SMCO3A2RU48 225 aa12.94□□□□□ -0.34
USHBP1-209ENST00000598570 MPC2O95563 127 aa12.94□□□□□ -0.34
USHBP1-209ENST00000598570 ORM2P19652 201 aa12.94□□□□□ -0.34
USHBP1-209ENST00000598570 HBG1P69891 147 aa12.94□□□□□ -0.34
USHBP1-209ENST00000598570 HBG2P69892 147 aa12.94□□□□□ -0.34
USHBP1-209ENST00000598570 OR8I2Q8N0Y5 310 aa12.94□□□□□ -0.34
USHBP1-209ENST00000598570 OR1B1Q8NGR6 318 aa12.94□□□□□ -0.34
USHBP1-209ENST00000598570 TMEM147Q9BVK8 224 aa12.94□□□□□ -0.34
USHBP1-209ENST00000598570 RETNQ9HD89 108 aa12.94□□□□□ -0.34
USHBP1-209ENST00000598570 UQCC1Q9NVA1 299 aa12.94□□□□□ -0.34
USHBP1-209ENST00000598570 C3orf84H3BNL1 204 aa12.93□□□□□ -0.34
USHBP1-209ENST00000598570 ISLRO14498 428 aa12.93□□□□□ -0.34
USHBP1-209ENST00000598570 MRPS12O15235 138 aaKnown RBP12.93□□□□□ -0.34
USHBP1-209ENST00000598570 SSNA1O43805 119 aa12.93□□□□□ -0.34
USHBP1-209ENST00000598570 ZNF688P0C7X2 276 aa12.93□□□□□ -0.34
USHBP1-209ENST00000598570 RPL29P47914 159 aaKnown RBP12.93□□□□□ -0.34
USHBP1-209ENST00000598570 PSMB3P49720 205 aa12.93□□□□□ -0.34
USHBP1-209ENST00000598570 BAXQ07812 192 aa12.93□□□□□ -0.34
USHBP1-209ENST00000598570 STX12Q86Y82 276 aa12.93□□□□□ -0.34
USHBP1-209ENST00000598570 TMEM37Q8WXS4 190 aa12.93□□□□□ -0.34
USHBP1-209ENST00000598570 SLC25A31Q9H0C2 315 aa12.93□□□□□ -0.34
USHBP1-209ENST00000598570 SLC25A32Q9H2D1 315 aa12.93□□□□□ -0.34
USHBP1-209ENST00000598570 HIGD1AQ9Y241 93 aa12.93□□□□□ -0.34
USHBP1-209ENST00000598570 ELOA3CA0A087WX78 387 aaPredicted RBP12.92□□□□□ -0.34
USHBP1-209ENST00000598570 MPDU1O75352 247 aa12.92□□□□□ -0.34
USHBP1-209ENST00000598570 ATF4P18848 351 aaPredicted RBP12.92□□□□□ -0.34
USHBP1-209ENST00000598570 CXCL3P19876 107 aa12.92□□□□□ -0.34
USHBP1-209ENST00000598570 MEOX2P50222 304 aa12.92□□□□□ -0.34
USHBP1-209ENST00000598570 SNRPD3P62318 126 aaKnown RBP12.92□□□□□ -0.34
USHBP1-209ENST00000598570 EWSR1Q01844 656 aaKnown RBP eCLIP12.92□□□□□ -0.34
USHBP1-209ENST00000598570 NHLH2Q02577 135 aa12.92□□□□□ -0.34
USHBP1-209ENST00000598570 LEMD1Q68G75 181 aa12.92□□□□□ -0.34
USHBP1-209ENST00000598570 S100A7AQ86SG5 101 aa12.92□□□□□ -0.34
USHBP1-209ENST00000598570 TMEM217Q8N7C4 229 aa12.92□□□□□ -0.34
USHBP1-209ENST00000598570 GATAD1Q8WUU5 269 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms