RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 LEMD1Q68G75 181 aa10.24□□□□□ -0.77
UPF1-205ENST00000598209 GGACTQ9BVM4 153 aa10.24□□□□□ -0.77
UPF1-205ENST00000598209 STAB2Q8WWQ8 2551 aa10.23□□□□□ -0.77
UPF1-205ENST00000598209 KIR2DL5BA0A0G2JN68 375 aa10.23□□□□□ -0.77
UPF1-205ENST00000598209 KIR2DL5BA0A0G2JPC4 375 aa10.23□□□□□ -0.77
UPF1-205ENST00000598209 SSNA1O43805 119 aa10.23□□□□□ -0.77
UPF1-205ENST00000598209 CST7O76096 145 aa10.23□□□□□ -0.77
UPF1-205ENST00000598209 SLC38A11Q08AI6 406 aa10.23□□□□□ -0.77
UPF1-205ENST00000598209 C1orf194Q5T5A4 169 aa10.23□□□□□ -0.77
UPF1-205ENST00000598209 TEPPQ6URK8 271 aa10.23□□□□□ -0.77
UPF1-205ENST00000598209 KIR2DL5AQ8N109 375 aa10.23□□□□□ -0.77
UPF1-205ENST00000598209 OR1B1Q8NGR6 318 aa10.23□□□□□ -0.77
UPF1-205ENST00000598209 KIR2DL5BQ8NHK3 375 aa10.23□□□□□ -0.77
UPF1-205ENST00000598209 TMEM147Q9BVK8 224 aa10.23□□□□□ -0.77
UPF1-205ENST00000598209 NMES1Q9C002 83 aa10.23□□□□□ -0.77
UPF1-205ENST00000598209 NRN1Q9NPD7 142 aa10.23□□□□□ -0.77
UPF1-205ENST00000598209 LYRM2Q9NU23 88 aaPredicted RBP10.23□□□□□ -0.77
UPF1-205ENST00000598209 FBXL17Q9UF56 701 aa10.23□□□□□ -0.77
UPF1-205ENST00000598209 SLC45A2Q9UMX9 530 aa10.23□□□□□ -0.77
UPF1-205ENST00000598209 IGSF23A1L1A6 192 aa10.22□□□□□ -0.77
UPF1-205ENST00000598209 UBE2CO00762 179 aa10.22□□□□□ -0.77
UPF1-205ENST00000598209 PTTG1O95997 202 aa10.22□□□□□ -0.77
UPF1-205ENST00000598209 LINC00869P0C866 280 aa10.22□□□□□ -0.77
UPF1-205ENST00000598209 SELENOTP62341 195 aa10.22□□□□□ -0.77
UPF1-205ENST00000598209 CYCSP99999 105 aaKnown RBP10.22□□□□□ -0.77
UPF1-205ENST00000598209 LRRC37A5PQ49AS3 106 aa10.22□□□□□ -0.77
UPF1-205ENST00000598209 OR8I2Q8N0Y5 310 aa10.22□□□□□ -0.77
UPF1-205ENST00000598209 TMEM252Q8N6L7 170 aa10.22□□□□□ -0.77
UPF1-205ENST00000598209 TMEM217Q8N7C4 229 aa10.22□□□□□ -0.77
UPF1-205ENST00000598209 DOK5Q9P104 306 aa10.22□□□□□ -0.77
UPF1-205ENST00000598209 ZNF98A6NK75 572 aa10.21□□□□□ -0.77
UPF1-205ENST00000598209 RLN2P04090 185 aa10.21□□□□□ -0.77
UPF1-205ENST00000598209 S100A7P31151 101 aa10.21□□□□□ -0.77
UPF1-205ENST00000598209 SULT1A1P50225 295 aa10.21□□□□□ -0.77
UPF1-205ENST00000598209 H2BFSP57053 126 aa10.21□□□□□ -0.77
UPF1-205ENST00000598209 PLP1P60201 277 aa10.21□□□□□ -0.77
UPF1-205ENST00000598209 STX12Q86Y82 276 aa10.21□□□□□ -0.77
UPF1-205ENST00000598209 OVOL2Q9BRP0 275 aa10.21□□□□□ -0.77
UPF1-205ENST00000598209 SLC25A22Q9H936 323 aa10.21□□□□□ -0.77
UPF1-205ENST00000598209 EDA2RQ9HAV5 297 aa10.21□□□□□ -0.77
UPF1-205ENST00000598209 NBEAL2Q6ZNJ1 2754 aa10.21□□□□□ -0.78
UPF1-205ENST00000598209 KNCNA6PVL3 124 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 H3BRN7 92 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 AGPAT2O15120 278 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 HYPMO75409 117 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 OR5G3P0C626 314 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 S100A11P31949 105 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 RAP2BP61225 183 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 SNRPD3P62318 126 aaKnown RBP10.2□□□□□ -0.78
UPF1-205ENST00000598209 HBG1P69891 147 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 HBG2P69892 147 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 DEFB135Q30KP9 77 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 PSMG4Q5JS54 123 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 Q6ZWC4 215 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 ZNF546Q86UE3 836 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 STHQ8IWL8 128 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 MGST2Q99735 147 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 SCRT1Q9BWW7 348 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 CSTL1Q9H114 145 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 SLC25A32Q9H2D1 315 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 SEPSECSQ9HD40 501 aaKnown RBP10.2□□□□□ -0.78
UPF1-205ENST00000598209 UQCC1Q9NVA1 299 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 OR5AC2Q9NZP5 309 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 HIGD1AQ9Y241 93 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 ALG5Q9Y673 324 aa10.2□□□□□ -0.78
UPF1-205ENST00000598209 E5RGE8 158 aa10.19□□□□□ -0.78
UPF1-205ENST00000598209 H0YIZ8 118 aa10.19□□□□□ -0.78
UPF1-205ENST00000598209 SPRY2O43597 315 aa10.19□□□□□ -0.78
UPF1-205ENST00000598209 GALR1P47211 349 aa10.19□□□□□ -0.78
UPF1-205ENST00000598209 VWC2Q2TAL6 325 aa10.19□□□□□ -0.78
UPF1-205ENST00000598209 MUC7Q8TAX7 377 aa10.19□□□□□ -0.78
UPF1-205ENST00000598209 PPP1R1CQ8WVI7 109 aa10.19□□□□□ -0.78
UPF1-205ENST00000598209 SHANK2-AS3Q9BTD1 123 aa10.19□□□□□ -0.78
UPF1-205ENST00000598209 SLC25A39Q9BZJ4 359 aaPredicted RBP10.19□□□□□ -0.78
UPF1-205ENST00000598209 ARL6Q9H0F7 186 aa10.19□□□□□ -0.78
UPF1-205ENST00000598209 TP53TG1Q9Y2A0 90 aa10.19□□□□□ -0.78
UPF1-205ENST00000598209 UBE2L5PA0A1B0GUS4 154 aa10.18□□□□□ -0.78
UPF1-205ENST00000598209 ID1P41134 155 aa10.18□□□□□ -0.78
UPF1-205ENST00000598209 RAB31Q13636 194 aa10.18□□□□□ -0.78
UPF1-205ENST00000598209 ATP6V1FQ16864 119 aa10.18□□□□□ -0.78
UPF1-205ENST00000598209 ACTL10Q5JWF8 245 aa10.18□□□□□ -0.78
UPF1-205ENST00000598209 TRPT1Q86TN4 253 aaKnown RBP10.18□□□□□ -0.78
UPF1-205ENST00000598209 GPR82Q96P67 336 aa10.18□□□□□ -0.78
UPF1-205ENST00000598209 UHRF2Q96PU4 802 aa10.18□□□□□ -0.78
UPF1-205ENST00000598209 SLC25A31Q9H0C2 315 aa10.18□□□□□ -0.78
UPF1-205ENST00000598209 WDR83OSQ9Y284 106 aa10.18□□□□□ -0.78
UPF1-205ENST00000598209 C3orf84H3BNL1 204 aa10.17□□□□□ -0.78
UPF1-205ENST00000598209 SOCS3O14543 225 aa10.17□□□□□ -0.78
UPF1-205ENST00000598209 CA1P00915 261 aaPredicted RBP10.17□□□□□ -0.78
UPF1-205ENST00000598209 CAMLGP49069 296 aa10.17□□□□□ -0.78
UPF1-205ENST00000598209 PSMB3P49720 205 aa10.17□□□□□ -0.78
UPF1-205ENST00000598209 EWSR1Q01844 656 aaKnown RBP eCLIP10.17□□□□□ -0.78
UPF1-205ENST00000598209 NHLH2Q02577 135 aa10.17□□□□□ -0.78
UPF1-205ENST00000598209 BAXQ07812 192 aa10.17□□□□□ -0.78
UPF1-205ENST00000598209 PXDC1Q5TGL8 231 aa10.17□□□□□ -0.78
UPF1-205ENST00000598209 PATE2Q6UY27 113 aa10.17□□□□□ -0.78
UPF1-205ENST00000598209 S100A7AQ86SG5 101 aa10.17□□□□□ -0.78
UPF1-205ENST00000598209 RNF183Q96D59 192 aa10.17□□□□□ -0.78
UPF1-205ENST00000598209 LINC00052Q96N35 136 aa10.17□□□□□ -0.78
UPF1-205ENST00000598209 RSG1Q9BU20 258 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms