RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 PFN1P07737 140 aaKnown RBP13.36□□□□□ -0.27
SHKBP1-216ENST00000598201 SLC25A16P16260 332 aa13.36□□□□□ -0.27
SHKBP1-216ENST00000598201 C5orf56Q8N8D9 126 aa13.36□□□□□ -0.27
SHKBP1-216ENST00000598201 SGMS2Q8NHU3 365 aa13.36□□□□□ -0.27
SHKBP1-216ENST00000598201 HIGD1AQ9Y241 93 aa13.36□□□□□ -0.27
SHKBP1-216ENST00000598201 K7EN84 100 aa13.36□□□□□ -0.27
SHKBP1-216ENST00000598201 IGHV3-23P01764 117 aa13.36□□□□□ -0.27
SHKBP1-216ENST00000598201 ANAPC16Q96DE5 110 aa13.36□□□□□ -0.27
SHKBP1-216ENST00000598201 A0A096LNT2 108 aa13.35□□□□□ -0.27
SHKBP1-216ENST00000598201 B4DSR2 109 aa13.35□□□□□ -0.27
SHKBP1-216ENST00000598201 GP9P14770 177 aa13.35□□□□□ -0.27
SHKBP1-216ENST00000598201 GALR1P47211 349 aa13.35□□□□□ -0.27
SHKBP1-216ENST00000598201 ECSCRQ19T08 205 aa13.35□□□□□ -0.27
SHKBP1-216ENST00000598201 FAM210BQ96KR6 192 aa13.35□□□□□ -0.27
SHKBP1-216ENST00000598201 TMUB1Q9BVT8 246 aa13.35□□□□□ -0.27
SHKBP1-216ENST00000598201 SLC25A39Q9BZJ4 359 aaPredicted RBP13.35□□□□□ -0.27
SHKBP1-216ENST00000598201 MEGF9Q9H1U4 602 aa13.35□□□□□ -0.27
SHKBP1-216ENST00000598201 MRPL27Q9P0M9 148 aaKnown RBP13.35□□□□□ -0.27
SHKBP1-216ENST00000598201 C9JCJ5 164 aa13.35□□□□□ -0.27
SHKBP1-216ENST00000598201 MFAP4P55083 255 aa13.35□□□□□ -0.27
SHKBP1-216ENST00000598201 UNQ5815/PRO19632Q6UWF5 114 aa13.35□□□□□ -0.27
SHKBP1-216ENST00000598201 ZNF329Q86UD4 541 aa13.35□□□□□ -0.27
SHKBP1-216ENST00000598201 C1QL4Q86Z23 238 aa13.35□□□□□ -0.27
SHKBP1-216ENST00000598201 BLNKQ8WV28 456 aa13.35□□□□□ -0.27
SHKBP1-216ENST00000598201 TCEAL7Q9BRU2 100 aa13.35□□□□□ -0.27
SHKBP1-216ENST00000598201 TRBV24-1A0A075B6N3 115 aa13.34□□□□□ -0.27
SHKBP1-216ENST00000598201 HELTA6NFD8 242 aa13.34□□□□□ -0.27
SHKBP1-216ENST00000598201 RNF223E7ERA6 249 aa13.34□□□□□ -0.27
SHKBP1-216ENST00000598201 G3V318 75 aa13.34□□□□□ -0.27
SHKBP1-216ENST00000598201 GNG7O60262 68 aa13.34□□□□□ -0.27
SHKBP1-216ENST00000598201 TOMM40O96008 361 aa13.34□□□□□ -0.27
SHKBP1-216ENST00000598201 AMY1AP04745 511 aa13.34□□□□□ -0.27
SHKBP1-216ENST00000598201 ZNF491Q8N8L2 437 aa13.34□□□□□ -0.27
SHKBP1-216ENST00000598201 STXBP6Q8NFX7 210 aa13.34□□□□□ -0.27
SHKBP1-216ENST00000598201 SFRP2Q96HF1 295 aa13.34□□□□□ -0.27
SHKBP1-216ENST00000598201 C21orf62Q9NYP8 219 aa13.34□□□□□ -0.27
SHKBP1-216ENST00000598201 OTOGQ6ZRI0 2925 aa13.34□□□□□ -0.27
SHKBP1-216ENST00000598201 H3BTX0 84 aa13.33□□□□□ -0.27
SHKBP1-216ENST00000598201 MYCNOSP40205 109 aa13.33□□□□□ -0.27
SHKBP1-216ENST00000598201 RANP62826 216 aaKnown RBP13.33□□□□□ -0.27
SHKBP1-216ENST00000598201 CENPWQ5EE01 88 aa13.33□□□□□ -0.27
SHKBP1-216ENST00000598201 BCL6BQ8N143 479 aaPredicted RBP13.33□□□□□ -0.27
SHKBP1-216ENST00000598201 FAM110DQ8TAY7 271 aaPredicted RBP13.33□□□□□ -0.27
SHKBP1-216ENST00000598201 ZNF48Q96MX3 618 aaPredicted RBP13.33□□□□□ -0.27
SHKBP1-216ENST00000598201 FBXL7Q9UJT9 491 aa13.33□□□□□ -0.27
SHKBP1-216ENST00000598201 NBEAP1P0C6P0 100 aa13.33□□□□□ -0.28
SHKBP1-216ENST00000598201 CD99P14209 185 aa13.33□□□□□ -0.28
SHKBP1-216ENST00000598201 Q56UQ5 140 aa13.33□□□□□ -0.28
SHKBP1-216ENST00000598201 MAPK1IP1LQ8NDC0 245 aa13.33□□□□□ -0.28
SHKBP1-216ENST00000598201 LINC00479Q96M42 142 aa13.33□□□□□ -0.28
SHKBP1-216ENST00000598201 OR5B12Q96R08 314 aa13.33□□□□□ -0.28
SHKBP1-216ENST00000598201 THYN1Q9P016 225 aa13.33□□□□□ -0.28
SHKBP1-216ENST00000598201 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.32□□□□□ -0.28
SHKBP1-216ENST00000598201 ITPR3Q14573 2671 aa13.32□□□□□ -0.28
SHKBP1-216ENST00000598201 IL4P05112 153 aa13.32□□□□□ -0.28
SHKBP1-216ENST00000598201 TEX38Q6PEX7 206 aa13.32□□□□□ -0.28
SHKBP1-216ENST00000598201 RNF125Q96EQ8 232 aa13.32□□□□□ -0.28
SHKBP1-216ENST00000598201 PYGO2Q9BRQ0 406 aa13.32□□□□□ -0.28
SHKBP1-216ENST00000598201 MOB4Q9Y3A3 225 aa13.32□□□□□ -0.28
SHKBP1-216ENST00000598201 TRAV30A0A087WSZ9 112 aa13.32□□□□□ -0.28
SHKBP1-216ENST00000598201 MDFIC2A0A1B0GVS7 189 aa13.32□□□□□ -0.28
SHKBP1-216ENST00000598201 WI2-2373I1.2A0A1W2PRP0 233 aa13.32□□□□□ -0.28
SHKBP1-216ENST00000598201 GNG4P50150 75 aa13.32□□□□□ -0.28
SHKBP1-216ENST00000598201 YPEL3P61236 119 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-216ENST00000598201 LY96Q9Y6Y9 160 aa13.32□□□□□ -0.28
SHKBP1-216ENST00000598201 ZNF469Q96JG9 3925 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-216ENST00000598201 OR2T8A6NH00 312 aa13.31□□□□□ -0.28
SHKBP1-216ENST00000598201 TRGC2P03986 189 aa13.31□□□□□ -0.28
SHKBP1-216ENST00000598201 SNRPEP62304 92 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-216ENST00000598201 GNG5P63218 68 aa13.31□□□□□ -0.28
SHKBP1-216ENST00000598201 LOXL1Q08397 574 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-216ENST00000598201 OR5I1Q13606 314 aa13.31□□□□□ -0.28
SHKBP1-216ENST00000598201 IGF2BP2-AS1Q96M15 143 aa13.31□□□□□ -0.28
SHKBP1-216ENST00000598201 SHANK2-AS3Q9BTD1 123 aa13.31□□□□□ -0.28
SHKBP1-216ENST00000598201 CREBBPQ92793 2442 aa13.31□□□□□ -0.28
SHKBP1-216ENST00000598201 H3BRN7 92 aa13.3□□□□□ -0.28
SHKBP1-216ENST00000598201 IGLV2-8P01709 118 aa13.3□□□□□ -0.28
SHKBP1-216ENST00000598201 FAM3BP58499 235 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-216ENST00000598201 USF2Q15853 346 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-216ENST00000598201 LY6EQ16553 131 aa13.3□□□□□ -0.28
SHKBP1-216ENST00000598201 CIARTQ8N365 385 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-216ENST00000598201 A0A1W2PPQ1 181 aa13.3□□□□□ -0.28
SHKBP1-216ENST00000598201 CTSGP08311 255 aa13.3□□□□□ -0.28
SHKBP1-216ENST00000598201 KLK9Q2XQG4 91 aa13.3□□□□□ -0.28
SHKBP1-216ENST00000598201 C15orf32Q32M92 178 aa13.3□□□□□ -0.28
SHKBP1-216ENST00000598201 CHRDL1Q9BU40 450 aa13.3□□□□□ -0.28
SHKBP1-216ENST00000598201 ZNF586Q9NXT0 402 aa13.3□□□□□ -0.28
SHKBP1-216ENST00000598201 KLK9Q9UKQ9 250 aa13.3□□□□□ -0.28
SHKBP1-216ENST00000598201 TRBV9A0A0B4J1U6 114 aa13.29□□□□□ -0.28
SHKBP1-216ENST00000598201 TRAV34A0A0B4J273 112 aa13.29□□□□□ -0.28
SHKBP1-216ENST00000598201 PGPA6NDG6 321 aa13.29□□□□□ -0.28
SHKBP1-216ENST00000598201 H3BUX3 64 aa13.29□□□□□ -0.28
SHKBP1-216ENST00000598201 PEX7O00628 323 aa13.29□□□□□ -0.28
SHKBP1-216ENST00000598201 PPP1R2P9O14990 202 aa13.29□□□□□ -0.28
SHKBP1-216ENST00000598201 SRP14P37108 136 aaKnown RBP13.29□□□□□ -0.28
SHKBP1-216ENST00000598201 RHOGP84095 191 aa13.29□□□□□ -0.28
SHKBP1-216ENST00000598201 LINC01356Q8N9X3 169 aa13.29□□□□□ -0.28
SHKBP1-216ENST00000598201 OR10G8Q8NGN5 311 aa13.29□□□□□ -0.28
SHKBP1-216ENST00000598201 NIT2Q9NQR4 276 aa13.29□□□□□ -0.28
SHKBP1-216ENST00000598201 TMEM14CQ9P0S9 112 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms