RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 TSPAN4O14817 238 aa10.81□□□□□ -0.68
VRK3-213ENST00000597215 HYPMO75409 117 aa10.81□□□□□ -0.68
VRK3-213ENST00000597215 RPL29P47914 159 aaKnown RBP10.81□□□□□ -0.68
VRK3-213ENST00000597215 DEFA6Q01524 100 aa10.81□□□□□ -0.68
VRK3-213ENST00000597215 GUCA2BQ16661 112 aa10.81□□□□□ -0.68
VRK3-213ENST00000597215 TCF24Q7RTU0 167 aa10.81□□□□□ -0.68
VRK3-213ENST00000597215 S100A7AQ86SG5 101 aa10.81□□□□□ -0.68
VRK3-213ENST00000597215 PRR25Q96S07 402 aa10.81□□□□□ -0.68
VRK3-213ENST00000597215 SPAG8Q99932 426 aaPredicted RBP10.81□□□□□ -0.68
VRK3-213ENST00000597215 NPCDR1Q9BY65 106 aa10.81□□□□□ -0.68
VRK3-213ENST00000597215 KCNIP2Q9NS61 270 aa10.81□□□□□ -0.68
VRK3-213ENST00000597215 DOK5Q9P104 306 aa10.81□□□□□ -0.68
VRK3-213ENST00000597215 FBXL17Q9UF56 701 aa10.81□□□□□ -0.68
VRK3-213ENST00000597215 DNAH3Q8TD57 4116 aa10.81□□□□□ -0.68
VRK3-213ENST00000597215 ZNF785A8K8V0 405 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 BUB3O43684 328 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 PRB2P02812 416 aaPredicted RBP10.8□□□□□ -0.68
VRK3-213ENST00000597215 B2MP61769 119 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 PRR20EP86478 221 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 PRR20CP86479 221 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 PRR20DP86480 221 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 PRR20BP86481 221 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 PRR20AP86496 221 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 ZNF266Q14584 549 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 MIC13Q5XKP0 118 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 FAM90A2PQ658T7 463 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 C16orf54Q6UWD8 224 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 Q6ZRG5 221 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 STPG3Q8N7X2 389 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 ZNF709Q8N972 641 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 SCGB1C1Q8TD33 95 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 GLMPQ8WWB7 406 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 ST6GAL2Q96JF0 529 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 PARD6GQ9BYG4 376 aaPredicted RBP10.8□□□□□ -0.68
VRK3-213ENST00000597215 ARL6Q9H0F7 186 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 WFDC1Q9HC57 220 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 HIGD1AQ9Y241 93 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 PXMP4Q9Y6I8 212 aa10.8□□□□□ -0.68
VRK3-213ENST00000597215 HELTA6NFD8 242 aa10.79□□□□□ -0.68
VRK3-213ENST00000597215 C17orf112F2Z3M2 114 aa10.79□□□□□ -0.68
VRK3-213ENST00000597215 ARPC5O15511 151 aa10.79□□□□□ -0.68
VRK3-213ENST00000597215 COX7A2P2O60397 106 aa10.79□□□□□ -0.68
VRK3-213ENST00000597215 OR5G3P0C626 314 aa10.79□□□□□ -0.68
VRK3-213ENST00000597215 AP2S1P53680 142 aaPredicted RBP10.79□□□□□ -0.68
VRK3-213ENST00000597215 RPL11P62913 178 aaKnown RBP10.79□□□□□ -0.68
VRK3-213ENST00000597215 PAFAH1B2P68402 229 aa10.79□□□□□ -0.68
VRK3-213ENST00000597215 C1orf194Q5T5A4 169 aa10.79□□□□□ -0.68
VRK3-213ENST00000597215 AKAP14Q86UN6 197 aa10.79□□□□□ -0.68
VRK3-213ENST00000597215 GTSCR1Q86UQ5 136 aa10.79□□□□□ -0.68
VRK3-213ENST00000597215 TCTE3Q8IZS6 198 aa10.79□□□□□ -0.68
VRK3-213ENST00000597215 NEURL2Q9BR09 285 aa10.79□□□□□ -0.68
VRK3-213ENST00000597215 SLC39A9Q9NUM3 307 aa10.79□□□□□ -0.68
VRK3-213ENST00000597215 ELOA3CA0A087WX78 387 aaPredicted RBP10.78□□□□□ -0.68
VRK3-213ENST00000597215 A0A1B0GVG6 124 aa10.78□□□□□ -0.68
VRK3-213ENST00000597215 OR4C46A6NHA9 309 aa10.78□□□□□ -0.68
VRK3-213ENST00000597215 HMSDA8MTL9 139 aa10.78□□□□□ -0.68
VRK3-213ENST00000597215 SIGLEC15Q6ZMC9 328 aa10.78□□□□□ -0.68
VRK3-213ENST00000597215 OR1L4Q8NGR5 311 aa10.78□□□□□ -0.68
VRK3-213ENST00000597215 PFDN5Q99471 154 aa10.78□□□□□ -0.68
VRK3-213ENST00000597215 SLC25A39Q9BZJ4 359 aaPredicted RBP10.78□□□□□ -0.68
VRK3-213ENST00000597215 MFFQ9GZY8 342 aa10.78□□□□□ -0.68
VRK3-213ENST00000597215 ARV1Q9H2C2 271 aa10.78□□□□□ -0.68
VRK3-213ENST00000597215 RNF24Q9Y225 148 aa10.78□□□□□ -0.68
VRK3-213ENST00000597215 IGKV3-7A0A075B6H7 116 aa10.77□□□□□ -0.69
VRK3-213ENST00000597215 ZNF98A6NK75 572 aa10.77□□□□□ -0.69
VRK3-213ENST00000597215 H3BRN7 92 aa10.77□□□□□ -0.69
VRK3-213ENST00000597215 DNASE2O00115 360 aaPredicted RBP10.77□□□□□ -0.69
VRK3-213ENST00000597215 C10orf113Q5VZT2 155 aa10.77□□□□□ -0.69
VRK3-213ENST00000597215 PATE2Q6UY27 113 aa10.77□□□□□ -0.69
VRK3-213ENST00000597215 OR8I2Q8N0Y5 310 aa10.77□□□□□ -0.69
VRK3-213ENST00000597215 OR11H4Q8NGC9 324 aa10.77□□□□□ -0.69
VRK3-213ENST00000597215 SHANK2-AS3Q9BTD1 123 aa10.77□□□□□ -0.69
VRK3-213ENST00000597215 SLC25A22Q9H936 323 aa10.77□□□□□ -0.69
VRK3-213ENST00000597215 BORCS7-ASMTA0A0B4J1R7 106 aa10.76□□□□□ -0.69
VRK3-213ENST00000597215 TRAV2A0A0B4J234 112 aa10.76□□□□□ -0.69
VRK3-213ENST00000597215 K7EIL1 84 aa10.76□□□□□ -0.69
VRK3-213ENST00000597215 CD81P60033 236 aa10.76□□□□□ -0.69
VRK3-213ENST00000597215 ZNF345Q14585 488 aa10.76□□□□□ -0.69
VRK3-213ENST00000597215 LINC00305Q7Z4B0 112 aa10.76□□□□□ -0.69
VRK3-213ENST00000597215 GBGT1Q8N5D6 347 aa10.76□□□□□ -0.69
VRK3-213ENST00000597215 STXBP6Q8NFX7 210 aa10.76□□□□□ -0.69
VRK3-213ENST00000597215 TMEM37Q8WXS4 190 aa10.76□□□□□ -0.69
VRK3-213ENST00000597215 GPR82Q96P67 336 aa10.76□□□□□ -0.69
VRK3-213ENST00000597215 UHRF2Q96PU4 802 aa10.76□□□□□ -0.69
VRK3-213ENST00000597215 RSG1Q9BU20 258 aa10.76□□□□□ -0.69
VRK3-213ENST00000597215 SCRT1Q9BWW7 348 aa10.76□□□□□ -0.69
VRK3-213ENST00000597215 MS4A6AQ9H2W1 248 aa10.76□□□□□ -0.69
VRK3-213ENST00000597215 DNAJC4Q9NNZ3 241 aa10.76□□□□□ -0.69
VRK3-213ENST00000597215 TAAR5O14804 337 aa10.75□□□□□ -0.69
VRK3-213ENST00000597215 CD7P09564 240 aa10.75□□□□□ -0.69
VRK3-213ENST00000597215 GALR1P47211 349 aa10.75□□□□□ -0.69
VRK3-213ENST00000597215 TFPI2P48307 235 aa10.75□□□□□ -0.69
VRK3-213ENST00000597215 LEMD1Q68G75 181 aa10.75□□□□□ -0.69
VRK3-213ENST00000597215 MRAPQ8TCY5 172 aa10.75□□□□□ -0.69
VRK3-213ENST00000597215 GATAD1Q8WUU5 269 aa10.75□□□□□ -0.69
VRK3-213ENST00000597215 SLC25A32Q9H2D1 315 aa10.75□□□□□ -0.69
VRK3-213ENST00000597215 TIMM9Q9Y5J7 89 aa10.75□□□□□ -0.69
VRK3-213ENST00000597215 A0A0D9SG52 128 aa10.74□□□□□ -0.69
VRK3-213ENST00000597215 C1QBP02746 253 aa10.74□□□□□ -0.69
VRK3-213ENST00000597215 RPL7P18124 248 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms