RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 RLN2P04090 185 aa7.64□□□□□ -1.19
LIG1-213ENST00000596672 BMI1P35226 326 aa7.64□□□□□ -1.19
LIG1-213ENST00000596672 OPRK1P41145 380 aa7.64□□□□□ -1.19
LIG1-213ENST00000596672 RND2P52198 227 aa7.64□□□□□ -1.19
LIG1-213ENST00000596672 APOC4P55056 127 aa7.64□□□□□ -1.19
LIG1-213ENST00000596672 SMCO1Q147U7 214 aa7.64□□□□□ -1.19
LIG1-213ENST00000596672 TMUB2Q71RG4 321 aa7.64□□□□□ -1.19
LIG1-213ENST00000596672 DCANP1Q8TF63 244 aa7.64□□□□□ -1.19
LIG1-213ENST00000596672 LINC00476Q8WZB0 136 aa7.64□□□□□ -1.19
LIG1-213ENST00000596672 MFFQ9GZY8 342 aa7.64□□□□□ -1.19
LIG1-213ENST00000596672 MAGT1Q9H0U3 335 aa7.64□□□□□ -1.19
LIG1-213ENST00000596672 CSTL1Q9H114 145 aa7.64□□□□□ -1.19
LIG1-213ENST00000596672 MED9Q9NWA0 146 aa7.64□□□□□ -1.19
LIG1-213ENST00000596672 RCL1Q9Y2P8 373 aaKnown RBP7.64□□□□□ -1.19
LIG1-213ENST00000596672 IGKV1D-37A0A075B6S9 117 aa7.63□□□□□ -1.19
LIG1-213ENST00000596672 PITX3O75364 302 aa7.63□□□□□ -1.19
LIG1-213ENST00000596672 NKX2-1P43699 371 aaPredicted RBP7.63□□□□□ -1.19
LIG1-213ENST00000596672 P2RY1P47900 373 aa7.63□□□□□ -1.19
LIG1-213ENST00000596672 DEFB1P60022 68 aa7.63□□□□□ -1.19
LIG1-213ENST00000596672 POLR2GP62487 172 aaKnown RBP eCLIP7.63□□□□□ -1.19
LIG1-213ENST00000596672 OPCMLQ14982 345 aa7.63□□□□□ -1.19
LIG1-213ENST00000596672 CEMP1Q6PRD7 247 aaPredicted RBP7.63□□□□□ -1.19
LIG1-213ENST00000596672 INO80EQ8NBZ0 244 aaPredicted RBP7.63□□□□□ -1.19
LIG1-213ENST00000596672 LRRC20Q8TCA0 184 aa7.63□□□□□ -1.19
LIG1-213ENST00000596672 GLMPQ8WWB7 406 aa7.63□□□□□ -1.19
LIG1-213ENST00000596672 NPIPB3Q92617 1050 aa7.63□□□□□ -1.19
LIG1-213ENST00000596672 RBKSQ9H477 322 aa7.63□□□□□ -1.19
LIG1-213ENST00000596672 HEYLQ9NQ87 328 aaPredicted RBP7.63□□□□□ -1.19
LIG1-213ENST00000596672 TNFSF18Q9UNG2 199 aa7.63□□□□□ -1.19
LIG1-213ENST00000596672 DYNC1H1Q14204 4646 aaKnown RBP7.63□□□□□ -1.19
LIG1-213ENST00000596672 HECTD4Q9Y4D8 3996 aa7.62□□□□□ -1.19
LIG1-213ENST00000596672 CXorf65A6NEN9 183 aa7.62□□□□□ -1.19
LIG1-213ENST00000596672 DEDDO75618 318 aa7.62□□□□□ -1.19
LIG1-213ENST00000596672 PET100P0DJ07 73 aa7.62□□□□□ -1.19
LIG1-213ENST00000596672 RBMY1A1P0DJD3 496 aaKnown RBP7.62□□□□□ -1.19
LIG1-213ENST00000596672 RBMY1CP0DJD4 496 aa7.62□□□□□ -1.19
LIG1-213ENST00000596672 SLC25A6P12236 298 aa7.62□□□□□ -1.19
LIG1-213ENST00000596672 NPPCP23582 126 aa7.62□□□□□ -1.19
LIG1-213ENST00000596672 NUP62P37198 522 aaPredicted RBP7.62□□□□□ -1.19
LIG1-213ENST00000596672 NANOS2P60321 138 aaKnown RBP7.62□□□□□ -1.19
LIG1-213ENST00000596672 ID3Q02535 119 aa7.62□□□□□ -1.19
LIG1-213ENST00000596672 RBMY1FQ15415 496 aaKnown RBP7.62□□□□□ -1.19
LIG1-213ENST00000596672 C16orf54Q6UWD8 224 aa7.62□□□□□ -1.19
LIG1-213ENST00000596672 TRPT1Q86TN4 253 aaKnown RBP7.62□□□□□ -1.19
LIG1-213ENST00000596672 SLC24A4Q8NFF2 622 aa7.62□□□□□ -1.19
LIG1-213ENST00000596672 C17orf77Q96MU5 243 aa7.62□□□□□ -1.19
LIG1-213ENST00000596672 GINS3Q9BRX5 216 aa7.62□□□□□ -1.19
LIG1-213ENST00000596672 ARL6Q9H0F7 186 aa7.62□□□□□ -1.19
LIG1-213ENST00000596672 HSPB7Q9UBY9 170 aa7.62□□□□□ -1.19
LIG1-213ENST00000596672 IGKV1OR2-108A0A075B7D4 117 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 TRAV2A0A0B4J234 112 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 A0A0D9SG52 128 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 RNF222A6NCQ9 220 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 CEBPZOSA8MTT3 80 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 E5RGE8 158 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 CORTO00230 105 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 WRBO00258 174 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 SSSCA1O60232 199 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 ZNF688P0C7X2 276 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 ATF4P18848 351 aaPredicted RBP7.61□□□□□ -1.19
LIG1-213ENST00000596672 NPY1RP25929 384 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 OR10J1P30954 320 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 S100A11P31949 105 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 SUB1P53999 127 aaKnown RBP eCLIP7.61□□□□□ -1.19
LIG1-213ENST00000596672 YPEL3P61236 119 aaPredicted RBP7.61□□□□□ -1.19
LIG1-213ENST00000596672 VAMP2P63027 116 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 OR2F1Q13607 317 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 ACOT7LQ6ZUV0 252 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 COMMD7Q86VX2 200 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 KCNRGQ8N5I3 272 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 RPP25LQ8N5L8 163 aaKnown RBP7.61□□□□□ -1.19
LIG1-213ENST00000596672 Q8NAQ8 132 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 CSNK1G2-AS1Q8NCQ2 148 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 STXBP6Q8NFX7 210 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 OR11H2Q8NH07 326 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 ENY2Q9NPA8 101 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 RABAC1Q9UI14 185 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 X6R8D5 127 aa7.61□□□□□ -1.19
LIG1-213ENST00000596672 DNAH11Q96DT5 4516 aa7.6□□□□□ -1.19
LIG1-213ENST00000596672 BUB3O43684 328 aa7.6□□□□□ -1.19
LIG1-213ENST00000596672 JTBO76095 146 aa7.6□□□□□ -1.19
LIG1-213ENST00000596672 CA1P00915 261 aaPredicted RBP7.6□□□□□ -1.19
LIG1-213ENST00000596672 IAPPP10997 89 aa7.6□□□□□ -1.19
LIG1-213ENST00000596672 PSG1P11464 419 aa7.6□□□□□ -1.19
LIG1-213ENST00000596672 PVALBP20472 110 aaPredicted RBP7.6□□□□□ -1.19
LIG1-213ENST00000596672 RPL12P30050 165 aaKnown RBP7.6□□□□□ -1.19
LIG1-213ENST00000596672 RPL11P62913 178 aaKnown RBP7.6□□□□□ -1.19
LIG1-213ENST00000596672 PRR20EP86478 221 aa7.6□□□□□ -1.19
LIG1-213ENST00000596672 PRR20CP86479 221 aa7.6□□□□□ -1.19
LIG1-213ENST00000596672 PRR20DP86480 221 aa7.6□□□□□ -1.19
LIG1-213ENST00000596672 PRR20BP86481 221 aa7.6□□□□□ -1.19
LIG1-213ENST00000596672 PRR20AP86496 221 aa7.6□□□□□ -1.19
LIG1-213ENST00000596672 ZNF90Q03938 601 aa7.6□□□□□ -1.19
LIG1-213ENST00000596672 GAMTQ14353 236 aa7.6□□□□□ -1.19
LIG1-213ENST00000596672 TOR2AQ5JU69 321 aa7.6□□□□□ -1.19
LIG1-213ENST00000596672 TMEM182Q6ZP80 229 aaPredicted RBP7.6□□□□□ -1.19
LIG1-213ENST00000596672 OR1S2Q8NGQ3 325 aa7.6□□□□□ -1.19
LIG1-213ENST00000596672 RNASEH2CQ8TDP1 164 aaKnown RBP7.6□□□□□ -1.19
LIG1-213ENST00000596672 PHLDA1Q8WV24 401 aaPredicted RBP7.6□□□□□ -1.19
LIG1-213ENST00000596672 ACY3Q96HD9 319 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms