RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 CFDP00746 253 aaPredicted RBP8.25□□□□□ -1.09
LIG1-211ENST00000596457 OR5G3P0C626 314 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 LINC00869P0C866 280 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 RPL35AP18077 110 aaKnown RBP8.25□□□□□ -1.09
LIG1-211ENST00000596457 S100A11P31949 105 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 CMC4P56277 68 aaPredicted RBP8.25□□□□□ -1.09
LIG1-211ENST00000596457 HBG1P69891 147 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 HBG2P69892 147 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 NHLH2Q02577 135 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 BAXQ07812 192 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 FCN2Q15485 313 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 HAGHQ16775 308 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 ODF3L2Q3SX64 289 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 FAM24BQ8N5W8 94 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 GLMPQ8WWB7 406 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 CITED4Q96RK1 184 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 TMEM147Q9BVK8 224 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 GGACTQ9BVM4 153 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 SLC25A31Q9H0C2 315 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 ARL6Q9H0F7 186 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 UQCC1Q9NVA1 299 aa8.25□□□□□ -1.09
LIG1-211ENST00000596457 LOC102724200A0A096LPH7 203 aaPredicted RBP8.24□□□□□ -1.09
LIG1-211ENST00000596457 UBE2L5PA0A1B0GUS4 154 aa8.24□□□□□ -1.09
LIG1-211ENST00000596457 FNDC10F2Z333 226 aa8.24□□□□□ -1.09
LIG1-211ENST00000596457 AGPAT2O15120 278 aa8.24□□□□□ -1.09
LIG1-211ENST00000596457 MPC2O95563 127 aa8.24□□□□□ -1.09
LIG1-211ENST00000596457 ZNF688P0C7X2 276 aa8.24□□□□□ -1.09
LIG1-211ENST00000596457 CXCL3P19876 107 aa8.24□□□□□ -1.09
LIG1-211ENST00000596457 NUP62P37198 522 aaPredicted RBP8.24□□□□□ -1.09
LIG1-211ENST00000596457 AP2S1P53680 142 aaPredicted RBP8.24□□□□□ -1.09
LIG1-211ENST00000596457 DEFB131AP59861 70 aa8.24□□□□□ -1.09
LIG1-211ENST00000596457 RAP2BP61225 183 aa8.24□□□□□ -1.09
LIG1-211ENST00000596457 EWSR1Q01844 656 aaKnown RBP eCLIP8.24□□□□□ -1.09
LIG1-211ENST00000596457 LEMD1Q68G75 181 aa8.24□□□□□ -1.09
LIG1-211ENST00000596457 OR8I2Q8N0Y5 310 aa8.24□□□□□ -1.09
LIG1-211ENST00000596457 STPG3Q8N7X2 389 aa8.24□□□□□ -1.09
LIG1-211ENST00000596457 MAP6D1Q9H9H5 199 aa8.24□□□□□ -1.09
LIG1-211ENST00000596457 HIGD1AQ9Y241 93 aa8.24□□□□□ -1.09
LIG1-211ENST00000596457 U3KQK5 164 aa8.24□□□□□ -1.09
LIG1-211ENST00000596457 K7EQG2 157 aa8.23□□□□□ -1.09
LIG1-211ENST00000596457 HYPMO75409 117 aa8.23□□□□□ -1.09
LIG1-211ENST00000596457 PET100P0DJ07 73 aa8.23□□□□□ -1.09
LIG1-211ENST00000596457 FGF7P21781 194 aa8.23□□□□□ -1.09
LIG1-211ENST00000596457 CAMLGP49069 296 aa8.23□□□□□ -1.09
LIG1-211ENST00000596457 SELENOTP62341 195 aa8.23□□□□□ -1.09
LIG1-211ENST00000596457 RAB31Q13636 194 aa8.23□□□□□ -1.09
LIG1-211ENST00000596457 ATP6V1FQ16864 119 aa8.23□□□□□ -1.09
LIG1-211ENST00000596457 OR5C1Q8NGR4 320 aa8.23□□□□□ -1.09
LIG1-211ENST00000596457 MGST2Q99735 147 aa8.23□□□□□ -1.09
LIG1-211ENST00000596457 RNF126Q9BV68 326 aa8.23□□□□□ -1.09
LIG1-211ENST00000596457 GGTLC1Q9BX51 225 aa8.23□□□□□ -1.09
LIG1-211ENST00000596457 RETNQ9HD89 108 aa8.23□□□□□ -1.09
LIG1-211ENST00000596457 FBXL17Q9UF56 701 aa8.23□□□□□ -1.09
LIG1-211ENST00000596457 TRAV2A0A0B4J234 112 aa8.22□□□□□ -1.09
LIG1-211ENST00000596457 ZNF98A6NK75 572 aa8.22□□□□□ -1.09
LIG1-211ENST00000596457 S100A7P31151 101 aa8.22□□□□□ -1.09
LIG1-211ENST00000596457 CLINT1Q14677 625 aa8.22□□□□□ -1.09
LIG1-211ENST00000596457 PSMG4Q5JS54 123 aa8.22□□□□□ -1.09
LIG1-211ENST00000596457 MIC13Q5XKP0 118 aa8.22□□□□□ -1.09
LIG1-211ENST00000596457 LINC00322Q6ZN03 302 aaPredicted RBP8.22□□□□□ -1.09
LIG1-211ENST00000596457 ZNF546Q86UE3 836 aa8.22□□□□□ -1.09
LIG1-211ENST00000596457 OR11H7Q8NGC8 314 aa8.22□□□□□ -1.09
LIG1-211ENST00000596457 THAP6Q8TBB0 222 aa8.22□□□□□ -1.09
LIG1-211ENST00000596457 RCHY1Q96PM5 261 aa8.22□□□□□ -1.09
LIG1-211ENST00000596457 UHRF2Q96PU4 802 aa8.22□□□□□ -1.09
LIG1-211ENST00000596457 SCRT1Q9BWW7 348 aa8.22□□□□□ -1.09
LIG1-211ENST00000596457 SMIM3Q9BZL3 60 aa8.22□□□□□ -1.09
LIG1-211ENST00000596457 SLC25A32Q9H2D1 315 aa8.22□□□□□ -1.09
LIG1-211ENST00000596457 MBD2Q9UBB5 411 aa8.22□□□□□ -1.09
LIG1-211ENST00000596457 SLC45A2Q9UMX9 530 aa8.22□□□□□ -1.09
LIG1-211ENST00000596457 KNCNA6PVL3 124 aa8.21□□□□□ -1.1
LIG1-211ENST00000596457 COX7A2P2O60397 106 aa8.21□□□□□ -1.1
LIG1-211ENST00000596457 RPL12P30050 165 aaKnown RBP8.21□□□□□ -1.1
LIG1-211ENST00000596457 GALR1P47211 349 aa8.21□□□□□ -1.1
LIG1-211ENST00000596457 FGL1Q08830 312 aa8.21□□□□□ -1.1
LIG1-211ENST00000596457 OXA1LQ15070 435 aa8.21□□□□□ -1.1
LIG1-211ENST00000596457 C1orf194Q5T5A4 169 aa8.21□□□□□ -1.1
LIG1-211ENST00000596457 PATE2Q6UY27 113 aa8.21□□□□□ -1.1
LIG1-211ENST00000596457 DCANP1Q8TF63 244 aa8.21□□□□□ -1.1
LIG1-211ENST00000596457 LINC00052Q96N35 136 aa8.21□□□□□ -1.1
LIG1-211ENST00000596457 FAM110AQ9BQ89 295 aa8.21□□□□□ -1.1
LIG1-211ENST00000596457 SPATA25Q9BR10 227 aa8.21□□□□□ -1.1
LIG1-211ENST00000596457 TM2D3Q9BRN9 247 aa8.21□□□□□ -1.1
LIG1-211ENST00000596457 RSG1Q9BU20 258 aa8.21□□□□□ -1.1
LIG1-211ENST00000596457 SLC25A39Q9BZJ4 359 aaPredicted RBP8.21□□□□□ -1.1
LIG1-211ENST00000596457 ARV1Q9H2C2 271 aa8.21□□□□□ -1.1
LIG1-211ENST00000596457 NRN1Q9NPD7 142 aa8.21□□□□□ -1.1
LIG1-211ENST00000596457 WDR83OSQ9Y284 106 aa8.21□□□□□ -1.1
LIG1-211ENST00000596457 H3BRN7 92 aa8.2□□□□□ -1.1
LIG1-211ENST00000596457 ATF4P18848 351 aaPredicted RBP8.2□□□□□ -1.1
LIG1-211ENST00000596457 APOC4P55056 127 aa8.2□□□□□ -1.1
LIG1-211ENST00000596457 PLP1P60201 277 aa8.2□□□□□ -1.1
LIG1-211ENST00000596457 SNRPD3P62318 126 aaKnown RBP8.2□□□□□ -1.1
LIG1-211ENST00000596457 VWC2Q2TAL6 325 aa8.2□□□□□ -1.1
LIG1-211ENST00000596457 C10orf113Q5VZT2 155 aa8.2□□□□□ -1.1
LIG1-211ENST00000596457 Q6ZRG5 221 aa8.2□□□□□ -1.1
LIG1-211ENST00000596457 STHQ8IWL8 128 aa8.2□□□□□ -1.1
LIG1-211ENST00000596457 HSPB11Q9Y547 144 aa8.2□□□□□ -1.1
LIG1-211ENST00000596457 SNRPCP09234 159 aaKnown RBP8.19□□□□□ -1.1
LIG1-211ENST00000596457 ID1P41134 155 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms