RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 TMEM252Q8N6L7 170 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 TMEM217Q8N7C4 229 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 NARS2Q96I59 477 aaKnown RBP8.21□□□□□ -1.1
VRK3-210ENST00000596121 OVOL2Q9BRP0 275 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 RNF126Q9BV68 326 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 NMES1Q9C002 83 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 EDA2RQ9HAV5 297 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 NPVFQ9HCQ7 196 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 OR5AC2Q9NZP5 309 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 DOK5Q9P104 306 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 SLC45A2Q9UMX9 530 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 ALG5Q9Y673 324 aa8.21□□□□□ -1.1
VRK3-210ENST00000596121 KNCNA6PVL3 124 aa8.2□□□□□ -1.1
VRK3-210ENST00000596121 SSNA1O43805 119 aa8.2□□□□□ -1.1
VRK3-210ENST00000596121 ZNF688P0C7X2 276 aa8.2□□□□□ -1.1
VRK3-210ENST00000596121 LINC00869P0C866 280 aa8.2□□□□□ -1.1
VRK3-210ENST00000596121 DEFB1P60022 68 aa8.2□□□□□ -1.1
VRK3-210ENST00000596121 BPIFCQ8NFQ6 507 aa8.2□□□□□ -1.1
VRK3-210ENST00000596121 OR1B1Q8NGR6 318 aa8.2□□□□□ -1.1
VRK3-210ENST00000596121 MGST2Q99735 147 aa8.2□□□□□ -1.1
VRK3-210ENST00000596121 GGACTQ9BVM4 153 aa8.2□□□□□ -1.1
VRK3-210ENST00000596121 SCRT1Q9BWW7 348 aa8.2□□□□□ -1.1
VRK3-210ENST00000596121 SLC25A32Q9H2D1 315 aa8.2□□□□□ -1.1
VRK3-210ENST00000596121 NRN1Q9NPD7 142 aa8.2□□□□□ -1.1
VRK3-210ENST00000596121 STARD9Q9P2P6 4700 aa8.19□□□□□ -1.1
VRK3-210ENST00000596121 ZNF98A6NK75 572 aa8.19□□□□□ -1.1
VRK3-210ENST00000596121 SOCS3O14543 225 aa8.19□□□□□ -1.1
VRK3-210ENST00000596121 AGPAT2O15120 278 aa8.19□□□□□ -1.1
VRK3-210ENST00000596121 PTTG1O95997 202 aa8.19□□□□□ -1.1
VRK3-210ENST00000596121 CFDP00746 253 aaPredicted RBP8.19□□□□□ -1.1
VRK3-210ENST00000596121 GIG44P09565 113 aaPredicted RBP8.19□□□□□ -1.1
VRK3-210ENST00000596121 CXCL3P19876 107 aa8.19□□□□□ -1.1
VRK3-210ENST00000596121 SULT1A1P50225 295 aa8.19□□□□□ -1.1
VRK3-210ENST00000596121 AP2S1P53680 142 aaPredicted RBP8.19□□□□□ -1.1
VRK3-210ENST00000596121 CMC4P56277 68 aaPredicted RBP8.19□□□□□ -1.1
VRK3-210ENST00000596121 PLP1P60201 277 aa8.19□□□□□ -1.1
VRK3-210ENST00000596121 NHLH2Q02577 135 aa8.19□□□□□ -1.1
VRK3-210ENST00000596121 VWC2Q2TAL6 325 aa8.19□□□□□ -1.1
VRK3-210ENST00000596121 LRRC37A5PQ49AS3 106 aa8.19□□□□□ -1.1
VRK3-210ENST00000596121 C1orf194Q5T5A4 169 aa8.19□□□□□ -1.1
VRK3-210ENST00000596121 TEPPQ6URK8 271 aa8.19□□□□□ -1.1
VRK3-210ENST00000596121 PPP1R1CQ8WVI7 109 aa8.19□□□□□ -1.1
VRK3-210ENST00000596121 MGAT4CQ9UBM8 478 aa8.19□□□□□ -1.1
VRK3-210ENST00000596121 KIR2DL5BA0A0G2JN68 375 aa8.18□□□□□ -1.1
VRK3-210ENST00000596121 KIR2DL5BA0A0G2JPC4 375 aa8.18□□□□□ -1.1
VRK3-210ENST00000596121 H3BRN7 92 aa8.18□□□□□ -1.1
VRK3-210ENST00000596121 PVALBP20472 110 aaPredicted RBP8.18□□□□□ -1.1
VRK3-210ENST00000596121 DEFB135Q30KP9 77 aa8.18□□□□□ -1.1
VRK3-210ENST00000596121 PSMG4Q5JS54 123 aa8.18□□□□□ -1.1
VRK3-210ENST00000596121 KIR2DL5AQ8N109 375 aa8.18□□□□□ -1.1
VRK3-210ENST00000596121 KIR2DL5BQ8NHK3 375 aa8.18□□□□□ -1.1
VRK3-210ENST00000596121 PPP1R14BQ96C90 147 aa8.18□□□□□ -1.1
VRK3-210ENST00000596121 UHRF2Q96PU4 802 aa8.18□□□□□ -1.1
VRK3-210ENST00000596121 SLC25A39Q9BZJ4 359 aaPredicted RBP8.18□□□□□ -1.1
VRK3-210ENST00000596121 SLC25A22Q9H936 323 aa8.18□□□□□ -1.1
VRK3-210ENST00000596121 WDR83OSQ9Y284 106 aa8.18□□□□□ -1.1
VRK3-210ENST00000596121 E5RGE8 158 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 HYPMO75409 117 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 NUP62P37198 522 aaPredicted RBP8.17□□□□□ -1.1
VRK3-210ENST00000596121 APOC4P55056 127 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 SELENOTP62341 195 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 EWSR1Q01844 656 aaKnown RBP eCLIP8.17□□□□□ -1.1
VRK3-210ENST00000596121 FCN2Q15485 313 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 ACTL10Q5JWF8 245 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 GDF5OSQ5U4N7 250 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 MORN5Q5VZ52 161 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 TRPT1Q86TN4 253 aaKnown RBP8.17□□□□□ -1.1
VRK3-210ENST00000596121 OR8I2Q8N0Y5 310 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 TMEM37Q8WXS4 190 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 RNF183Q96D59 192 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 C20orf173Q96LM9 149 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 SHANK2-AS3Q9BTD1 123 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 RSG1Q9BU20 258 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 TMEM147Q9BVK8 224 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 ARL6Q9H0F7 186 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 CSTL1Q9H114 145 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 UQCC1Q9NVA1 299 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 HIGD1AQ9Y241 93 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 CSMD3Q7Z407 3707 aa8.17□□□□□ -1.1
VRK3-210ENST00000596121 TRAV8-2A0A0B4J237 113 aa8.16□□□□□ -1.1
VRK3-210ENST00000596121 UBE2CO00762 179 aa8.16□□□□□ -1.1
VRK3-210ENST00000596121 MRPS12O15235 138 aaKnown RBP8.16□□□□□ -1.1
VRK3-210ENST00000596121 SPRY2O43597 315 aa8.16□□□□□ -1.1
VRK3-210ENST00000596121 MPC2O95563 127 aa8.16□□□□□ -1.1
VRK3-210ENST00000596121 OR5G3P0C626 314 aa8.16□□□□□ -1.1
VRK3-210ENST00000596121 S100A11P31949 105 aa8.16□□□□□ -1.1
VRK3-210ENST00000596121 CAMLGP49069 296 aa8.16□□□□□ -1.1
VRK3-210ENST00000596121 PRR20EP86478 221 aa8.16□□□□□ -1.1
VRK3-210ENST00000596121 PRR20CP86479 221 aa8.16□□□□□ -1.1
VRK3-210ENST00000596121 PRR20DP86480 221 aa8.16□□□□□ -1.1
VRK3-210ENST00000596121 PRR20BP86481 221 aa8.16□□□□□ -1.1
VRK3-210ENST00000596121 PRR20AP86496 221 aa8.16□□□□□ -1.1
VRK3-210ENST00000596121 CYCSP99999 105 aaKnown RBP8.16□□□□□ -1.1
VRK3-210ENST00000596121 MIC13Q5XKP0 118 aa8.16□□□□□ -1.1
VRK3-210ENST00000596121 Q6ZWC4 215 aa8.16□□□□□ -1.1
VRK3-210ENST00000596121 ZNF546Q86UE3 836 aa8.16□□□□□ -1.1
VRK3-210ENST00000596121 OR11H7Q8NGC8 314 aa8.16□□□□□ -1.1
VRK3-210ENST00000596121 SEPSECSQ9HD40 501 aaKnown RBP8.16□□□□□ -1.1
VRK3-210ENST00000596121 FBXL17Q9UF56 701 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms