RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 PPP1R14BQ96C90 147 aa19.22■□□□□ 0.67
TRIM28-204ENST00000594806 RNF126Q9BV68 326 aa19.22■□□□□ 0.67
TRIM28-204ENST00000594806 IGKV3-7A0A075B6H7 116 aa19.21■□□□□ 0.67
TRIM28-204ENST00000594806 GATA2P23769 480 aaPredicted RBP19.21■□□□□ 0.67
TRIM28-204ENST00000594806 FCN2Q15485 313 aa19.21■□□□□ 0.67
TRIM28-204ENST00000594806 TMEM182Q6ZP80 229 aaPredicted RBP19.21■□□□□ 0.67
TRIM28-204ENST00000594806 GBGT1Q8N5D6 347 aa19.21■□□□□ 0.67
TRIM28-204ENST00000594806 SRD5A3Q9H8P0 318 aa19.21■□□□□ 0.67
TRIM28-204ENST00000594806 AGPAT2O15120 278 aa19.2■□□□□ 0.66
TRIM28-204ENST00000594806 LINC00869P0C866 280 aa19.2■□□□□ 0.66
TRIM28-204ENST00000594806 TFPI2P48307 235 aa19.2■□□□□ 0.66
TRIM28-204ENST00000594806 EWSR1Q01844 656 aaKnown RBP eCLIP19.2■□□□□ 0.662e-7■■■□□ 16.6
TRIM28-204ENST00000594806 SIGLEC15Q6ZMC9 328 aa19.2■□□□□ 0.66
TRIM28-204ENST00000594806 OR11H7Q8NGC8 314 aa19.2■□□□□ 0.66
TRIM28-204ENST00000594806 WDR83OSQ9Y284 106 aa19.2■□□□□ 0.66
TRIM28-204ENST00000594806 ORM2P19652 201 aa19.19■□□□□ 0.66
TRIM28-204ENST00000594806 RAP2BP61225 183 aa19.19■□□□□ 0.66
TRIM28-204ENST00000594806 ODF3L2Q3SX64 289 aa19.19■□□□□ 0.66
TRIM28-204ENST00000594806 LINC00322Q6ZN03 302 aaPredicted RBP19.19■□□□□ 0.66
TRIM28-204ENST00000594806 STXBP6Q8NFX7 210 aa19.19■□□□□ 0.66
TRIM28-204ENST00000594806 RNF24Q9Y225 148 aa19.19■□□□□ 0.66
TRIM28-204ENST00000594806 TGP01266 2768 aa19.18■□□□□ 0.66
TRIM28-204ENST00000594806 MPDU1O75352 247 aa19.18■□□□□ 0.66
TRIM28-204ENST00000594806 HYPMO75409 117 aa19.18■□□□□ 0.66
TRIM28-204ENST00000594806 NHLH2Q02577 135 aa19.18■□□□□ 0.66
TRIM28-204ENST00000594806 SBSPONQ8IVN8 264 aa19.18■□□□□ 0.66
TRIM28-204ENST00000594806 OR1B1Q8NGR6 318 aa19.18■□□□□ 0.66
TRIM28-204ENST00000594806 THAP6Q8TBB0 222 aa19.18■□□□□ 0.66
TRIM28-204ENST00000594806 CHAC2Q8WUX2 184 aa19.18■□□□□ 0.66
TRIM28-204ENST00000594806 MGST2Q99735 147 aa19.18■□□□□ 0.66
TRIM28-204ENST00000594806 WFDC10AQ9H1F0 79 aa19.18■□□□□ 0.66
TRIM28-204ENST00000594806 SEPSECSQ9HD40 501 aaKnown RBP19.18■□□□□ 0.66
TRIM28-204ENST00000594806 K7EQG2 157 aa19.17■□□□□ 0.66
TRIM28-204ENST00000594806 LYL1P12980 280 aa19.17■□□□□ 0.66
TRIM28-204ENST00000594806 CAMLGP49069 296 aa19.17■□□□□ 0.66
TRIM28-204ENST00000594806 FGL1Q08830 312 aa19.17■□□□□ 0.66
TRIM28-204ENST00000594806 WFDC3Q8IUB2 231 aa19.17■□□□□ 0.66
TRIM28-204ENST00000594806 STPG3Q8N7X2 389 aa19.17■□□□□ 0.66
TRIM28-204ENST00000594806 OR5C1Q8NGR4 320 aa19.17■□□□□ 0.66
TRIM28-204ENST00000594806 DCANP1Q8TF63 244 aa19.17■□□□□ 0.66
TRIM28-204ENST00000594806 GPR82Q96P67 336 aa19.17■□□□□ 0.66
TRIM28-204ENST00000594806 NRN1Q9NPD7 142 aa19.17■□□□□ 0.66
TRIM28-204ENST00000594806 MBD2Q9UBB5 411 aa19.17■□□□□ 0.66
TRIM28-204ENST00000594806 UBQLN2Q9UHD9 624 aa19.17■□□□□ 0.66
TRIM28-204ENST00000594806 HIGD1AQ9Y241 93 aa19.17■□□□□ 0.66
TRIM28-204ENST00000594806 GIPP09681 153 aaPredicted RBP19.16■□□□□ 0.66
TRIM28-204ENST00000594806 OR8I2Q8N0Y5 310 aa19.16■□□□□ 0.66
TRIM28-204ENST00000594806 ASCL2Q99929 193 aa19.16■□□□□ 0.66
TRIM28-204ENST00000594806 UBE2L5PA0A1B0GUS4 154 aa19.15■□□□□ 0.66
TRIM28-204ENST00000594806 ZNF98A6NK75 572 aa19.15■□□□□ 0.66
TRIM28-204ENST00000594806 MAP6D1Q9H9H5 199 aa19.15■□□□□ 0.66
TRIM28-204ENST00000594806 RBMY1BA6NDE4 496 aaKnown RBP19.14■□□□□ 0.65
TRIM28-204ENST00000594806 RBMY1EA6NEQ0 496 aaKnown RBP19.14■□□□□ 0.65
TRIM28-204ENST00000594806 OR5G3P0C626 314 aa19.14■□□□□ 0.65
TRIM28-204ENST00000594806 RBMY1DP0C7P1 496 aaKnown RBP19.14■□□□□ 0.65
TRIM28-204ENST00000594806 RPL12P30050 165 aaKnown RBP19.14■□□□□ 0.65
TRIM28-204ENST00000594806 RPL29P47914 159 aaKnown RBP19.14■□□□□ 0.65
TRIM28-204ENST00000594806 HAGHQ16775 308 aa19.14■□□□□ 0.65
TRIM28-204ENST00000594806 SAMD13Q5VXD3 122 aa19.14■□□□□ 0.65
TRIM28-204ENST00000594806 Q6ZRG5 221 aa19.14■□□□□ 0.65
TRIM28-204ENST00000594806 SLC25A39Q9BZJ4 359 aaPredicted RBP19.14■□□□□ 0.65
TRIM28-204ENST00000594806 ARL6Q9H0F7 186 aa19.14■□□□□ 0.65
TRIM28-204ENST00000594806 ZMAT4Q9H898 229 aa19.14■□□□□ 0.65
TRIM28-204ENST00000594806 HSPB11Q9Y547 144 aa19.14■□□□□ 0.65
TRIM28-204ENST00000594806 ELOA3CA0A087WX78 387 aaPredicted RBP19.13■□□□□ 0.65
TRIM28-204ENST00000594806 LOC102724200A0A096LPH7 203 aaPredicted RBP19.13■□□□□ 0.65
TRIM28-204ENST00000594806 H3BRN7 92 aa19.13■□□□□ 0.65
TRIM28-204ENST00000594806 GALR1P47211 349 aa19.13■□□□□ 0.65
TRIM28-204ENST00000594806 TM2D3Q9BRN9 247 aa19.13■□□□□ 0.65
TRIM28-204ENST00000594806 SHANK2-AS3Q9BTD1 123 aa19.13■□□□□ 0.65
TRIM28-204ENST00000594806 GGTLC1Q9BX51 225 aa19.13■□□□□ 0.65
TRIM28-204ENST00000594806 DOK5Q9P104 306 aa19.13■□□□□ 0.65
TRIM28-204ENST00000594806 FGF7P21781 194 aa19.12■□□□□ 0.65
TRIM28-204ENST00000594806 OPCMLQ14982 345 aa19.12■□□□□ 0.65
TRIM28-204ENST00000594806 CITED4Q96RK1 184 aa19.12■□□□□ 0.65
TRIM28-204ENST00000594806 ARV1Q9H2C2 271 aa19.12■□□□□ 0.65
TRIM28-204ENST00000594806 MEOX2P50222 304 aa19.11■□□□□ 0.65
TRIM28-204ENST00000594806 SNRPD3P62318 126 aaKnown RBP19.11■□□□□ 0.65
TRIM28-204ENST00000594806 PRR20EP86478 221 aa19.11■□□□□ 0.65
TRIM28-204ENST00000594806 PRR20CP86479 221 aa19.11■□□□□ 0.65
TRIM28-204ENST00000594806 PRR20DP86480 221 aa19.11■□□□□ 0.65
TRIM28-204ENST00000594806 PRR20BP86481 221 aa19.11■□□□□ 0.65
TRIM28-204ENST00000594806 PRR20AP86496 221 aa19.11■□□□□ 0.65
TRIM28-204ENST00000594806 SLC25A22Q9H936 323 aa19.11■□□□□ 0.65
TRIM28-204ENST00000594806 RPL7P18124 248 aaKnown RBP19.1■□□□□ 0.65
TRIM28-204ENST00000594806 DEFB131AP59861 70 aa19.1■□□□□ 0.65
TRIM28-204ENST00000594806 CLINT1Q14677 625 aa19.1■□□□□ 0.65
TRIM28-204ENST00000594806 OR1L4Q8NGR5 311 aa19.1■□□□□ 0.65
TRIM28-204ENST00000594806 PFDN5Q99471 154 aa19.1■□□□□ 0.65
TRIM28-204ENST00000594806 ATP5SQ99766 215 aa19.1■□□□□ 0.65
TRIM28-204ENST00000594806 SPATA25Q9BR10 227 aa19.1■□□□□ 0.65
TRIM28-204ENST00000594806 COX7A2P2O60397 106 aa19.09■□□□□ 0.65
TRIM28-204ENST00000594806 PATE2Q6UY27 113 aa19.09■□□□□ 0.65
TRIM28-204ENST00000594806 APRG1Q8IVJ8 170 aa19.09■□□□□ 0.65
TRIM28-204ENST00000594806 FAM24BQ8N5W8 94 aa19.09■□□□□ 0.65
TRIM28-204ENST00000594806 NPCDR1Q9BY65 106 aa19.09■□□□□ 0.65
TRIM28-204ENST00000594806 SLC25A32Q9H2D1 315 aa19.09■□□□□ 0.65
TRIM28-204ENST00000594806 DNAJC4Q9NNZ3 241 aa19.09■□□□□ 0.65
TRIM28-204ENST00000594806 KCNIP2Q9NS61 270 aa19.09■□□□□ 0.65
TRIM28-204ENST00000594806 SLC39A9Q9NUM3 307 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms