RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 ELOA3CA0A087WX78 387 aaPredicted RBP8.27□□□□□ -1.09
USE1-204ENST00000594399 TMEM213A2RRL7 107 aa8.27□□□□□ -1.09
USE1-204ENST00000594399 K7EMT4 169 aa8.27□□□□□ -1.09
USE1-204ENST00000594399 ZNF207O43670 478 aaKnown RBP8.27□□□□□ -1.09
USE1-204ENST00000594399 HYPMO75409 117 aa8.27□□□□□ -1.09
USE1-204ENST00000594399 OR5G3P0C626 314 aa8.27□□□□□ -1.09
USE1-204ENST00000594399 SEC11BP0C7V7 166 aa8.27□□□□□ -1.09
USE1-204ENST00000594399 S100A7P31151 101 aa8.27□□□□□ -1.09
USE1-204ENST00000594399 ACOT6Q3I5F7 207 aaPredicted RBP8.27□□□□□ -1.09
USE1-204ENST00000594399 PRR31Q5SQ13 230 aa8.27□□□□□ -1.09
USE1-204ENST00000594399 C10orf113Q5VZT2 155 aa8.27□□□□□ -1.09
USE1-204ENST00000594399 S100A7AQ86SG5 101 aa8.27□□□□□ -1.09
USE1-204ENST00000594399 OR9G4Q8NGQ1 327 aa8.27□□□□□ -1.09
USE1-204ENST00000594399 NARS2Q96I59 477 aaKnown RBP8.27□□□□□ -1.09
USE1-204ENST00000594399 PFDN2Q9UHV9 154 aa8.27□□□□□ -1.09
USE1-204ENST00000594399 HIGD1AQ9Y241 93 aa8.27□□□□□ -1.09
USE1-204ENST00000594399 C2orf70A6NJV1 201 aa8.26□□□□□ -1.09
USE1-204ENST00000594399 H3BRN7 92 aa8.26□□□□□ -1.09
USE1-204ENST00000594399 MBP02144 154 aa8.26□□□□□ -1.09
USE1-204ENST00000594399 M6PRP20645 277 aa8.26□□□□□ -1.09
USE1-204ENST00000594399 NPPCP23582 126 aa8.26□□□□□ -1.09
USE1-204ENST00000594399 CRYBB3P26998 211 aa8.26□□□□□ -1.09
USE1-204ENST00000594399 BMI1P35226 326 aa8.26□□□□□ -1.09
USE1-204ENST00000594399 RAB2AP61019 212 aa8.26□□□□□ -1.09
USE1-204ENST00000594399 TM4SF20Q53R12 229 aa8.26□□□□□ -1.09
USE1-204ENST00000594399 GCSAMLQ5JQS6 135 aa8.26□□□□□ -1.09
USE1-204ENST00000594399 AKR1C8PQ5T2L2 129 aa8.26□□□□□ -1.09
USE1-204ENST00000594399 GATAD1Q8WUU5 269 aa8.26□□□□□ -1.09
USE1-204ENST00000594399 TMED6Q8WW62 240 aa8.26□□□□□ -1.09
USE1-204ENST00000594399 MARC2Q969Z3 335 aa8.26□□□□□ -1.09
USE1-204ENST00000594399 PHYHIPLQ96FC7 376 aa8.26□□□□□ -1.09
USE1-204ENST00000594399 DNAJC4Q9NNZ3 241 aa8.26□□□□□ -1.09
USE1-204ENST00000594399 MRPL27Q9P0M9 148 aaKnown RBP8.26□□□□□ -1.09
USE1-204ENST00000594399 WNK1Q9H4A3 2382 aa8.26□□□□□ -1.09
USE1-204ENST00000594399 IGHV7-4-1A0A0J9YVY3 117 aa8.25□□□□□ -1.09
USE1-204ENST00000594399 TMEM41BQ5BJD5 291 aa8.25□□□□□ -1.09
USE1-204ENST00000594399 PATE2Q6UY27 113 aa8.25□□□□□ -1.09
USE1-204ENST00000594399 LINC00305Q7Z4B0 112 aa8.25□□□□□ -1.09
USE1-204ENST00000594399 OR10G4Q8NGN3 311 aa8.25□□□□□ -1.09
USE1-204ENST00000594399 OR10G9Q8NGN4 311 aa8.25□□□□□ -1.09
USE1-204ENST00000594399 OR10G7Q8NGN6 311 aa8.25□□□□□ -1.09
USE1-204ENST00000594399 TMEM37Q8WXS4 190 aa8.25□□□□□ -1.09
USE1-204ENST00000594399 UHRF2Q96PU4 802 aa8.25□□□□□ -1.09
USE1-204ENST00000594399 ELOVL1Q9BW60 279 aa8.25□□□□□ -1.09
USE1-204ENST00000594399 SCRT1Q9BWW7 348 aa8.25□□□□□ -1.09
USE1-204ENST00000594399 MRPL32Q9BYC8 188 aaKnown RBP8.25□□□□□ -1.09
USE1-204ENST00000594399 SLC25A39Q9BZJ4 359 aaPredicted RBP8.25□□□□□ -1.09
USE1-204ENST00000594399 TMEM231Q9H6L2 316 aa8.25□□□□□ -1.09
USE1-204ENST00000594399 TRRAPQ9Y4A5 3859 aa8.25□□□□□ -1.09
USE1-204ENST00000594399 IGHV3-49A0A0A0MS15 119 aa8.24□□□□□ -1.09
USE1-204ENST00000594399 A0A1W2PS18 150 aa8.24□□□□□ -1.09
USE1-204ENST00000594399 UMAD1C9J7I0 102 aa8.24□□□□□ -1.09
USE1-204ENST00000594399 FOLR2P14207 255 aa8.24□□□□□ -1.09
USE1-204ENST00000594399 CD33P20138 364 aa8.24□□□□□ -1.09
USE1-204ENST00000594399 EDN2P20800 178 aa8.24□□□□□ -1.09
USE1-204ENST00000594399 CBLN1P23435 193 aa8.24□□□□□ -1.09
USE1-204ENST00000594399 CDC34P49427 236 aaPredicted RBP8.24□□□□□ -1.09
USE1-204ENST00000594399 RHOBP62745 196 aa8.24□□□□□ -1.09
USE1-204ENST00000594399 FAM78BQ5VT40 261 aa8.24□□□□□ -1.09
USE1-204ENST00000594399 FAM122CQ6P4D5 195 aa8.24□□□□□ -1.09
USE1-204ENST00000594399 GRAMD2BQ96HH9 432 aa8.24□□□□□ -1.09
USE1-204ENST00000594399 RNF2Q99496 336 aa8.24□□□□□ -1.09
USE1-204ENST00000594399 SHANK2-AS3Q9BTD1 123 aa8.24□□□□□ -1.09
USE1-204ENST00000594399 RHPN1-AS1Q9BWJ2 59 aa8.24□□□□□ -1.09
USE1-204ENST00000594399 VSIRQ9H7M9 311 aa8.24□□□□□ -1.09
USE1-204ENST00000594399 RNF24Q9Y225 148 aa8.24□□□□□ -1.09
USE1-204ENST00000594399 U3KQE9 123 aa8.24□□□□□ -1.09
USE1-204ENST00000594399 IGHV3OR16-13A0A075B7E8 117 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 IGHV3-74A0A0B4J1X5 117 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 IGHV3-66A0A0C4DH42 116 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 SEC14L6B5MCN3 397 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 CHEK1O14757 476 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 SAP30O75446 220 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 APOHP02749 345 aaPredicted RBP8.23□□□□□ -1.09
USE1-204ENST00000594399 CSN3P07498 182 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 C8orf88P0DMB2 117 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 C1orf194Q5T5A4 169 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 ALKAL2Q6UX46 152 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 DPPA3Q6W0C5 159 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 IL34Q6ZMJ4 242 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 DYNLRB2Q8TF09 96 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 SLC25A22Q9H936 323 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 SEPSECSQ9HD40 501 aaKnown RBP8.23□□□□□ -1.09
USE1-204ENST00000594399 RPRMQ9NS64 109 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 SIGLEC8Q9NYZ4 499 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 SMPXQ9UHP9 88 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 FUT9Q9Y231 359 aa8.23□□□□□ -1.09
USE1-204ENST00000594399 A0A1W2PPV4 95 aa8.22□□□□□ -1.09
USE1-204ENST00000594399 ZNF98A6NK75 572 aa8.22□□□□□ -1.09
USE1-204ENST00000594399 BUB3O43684 328 aa8.22□□□□□ -1.09
USE1-204ENST00000594399 SULT1A2P50226 295 aa8.22□□□□□ -1.09
USE1-204ENST00000594399 RAB5CP51148 216 aa8.22□□□□□ -1.09
USE1-204ENST00000594399 TAS2R45P59539 299 aa8.22□□□□□ -1.09
USE1-204ENST00000594399 KHDC3LQ587J8 217 aa8.22□□□□□ -1.09
USE1-204ENST00000594399 FAM74A1Q5RGS3 127 aa8.22□□□□□ -1.09
USE1-204ENST00000594399 MORN5Q5VZ52 161 aa8.22□□□□□ -1.09
USE1-204ENST00000594399 SPATA31B1PQ5VZV4 182 aa8.22□□□□□ -1.09
USE1-204ENST00000594399 LEMD1Q68G75 181 aa8.22□□□□□ -1.09
USE1-204ENST00000594399 C16orf54Q6UWD8 224 aa8.22□□□□□ -1.09
USE1-204ENST00000594399 ADAMTSL5Q6ZMM2 481 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms