RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 C1orf134Q5TEV5 83 aa12.37□□□□□ -0.43
RETREG3-212ENST00000593251 EBLN2Q6P2I7 272 aa12.37□□□□□ -0.43
RETREG3-212ENST00000593251 LYZL2Q7Z4W2 148 aa12.37□□□□□ -0.43
RETREG3-212ENST00000593251 OR51S1Q8NGJ8 323 aa12.37□□□□□ -0.43
RETREG3-212ENST00000593251 PPP1R14BQ96C90 147 aa12.37□□□□□ -0.43
RETREG3-212ENST00000593251 SLC35E1Q96K37 410 aa12.37□□□□□ -0.43
RETREG3-212ENST00000593251 C20orf173Q96LM9 149 aa12.37□□□□□ -0.43
RETREG3-212ENST00000593251 A0A0J9YX75 114 aa12.36□□□□□ -0.43
RETREG3-212ENST00000593251 CTDSP2O14595 271 aa12.36□□□□□ -0.43
RETREG3-212ENST00000593251 PAX9P55771 341 aa12.36□□□□□ -0.43
RETREG3-212ENST00000593251 DAD1P61803 113 aa12.36□□□□□ -0.43
RETREG3-212ENST00000593251 SMCO1Q147U7 214 aa12.36□□□□□ -0.43
RETREG3-212ENST00000593251 RRN3P1Q2M238 152 aa12.36□□□□□ -0.43
RETREG3-212ENST00000593251 OR8I2Q8N0Y5 310 aa12.36□□□□□ -0.43
RETREG3-212ENST00000593251 SMIM4Q8WVI0 70 aa12.36□□□□□ -0.43
RETREG3-212ENST00000593251 IL22RA2Q969J5 263 aa12.36□□□□□ -0.43
RETREG3-212ENST00000593251 MAGT1Q9H0U3 335 aa12.36□□□□□ -0.43
RETREG3-212ENST00000593251 KCNIP3Q9Y2W7 256 aa12.36□□□□□ -0.43
RETREG3-212ENST00000593251 ISLRO14498 428 aa12.35□□□□□ -0.43
RETREG3-212ENST00000593251 PRM2P04554 102 aa12.35□□□□□ -0.43
RETREG3-212ENST00000593251 CCR6P51684 374 aa12.35□□□□□ -0.43
RETREG3-212ENST00000593251 C1orf194Q5T5A4 169 aa12.35□□□□□ -0.43
RETREG3-212ENST00000593251 SPATA31B1PQ5VZV4 182 aa12.35□□□□□ -0.43
RETREG3-212ENST00000593251 CLVS1Q8IUQ0 354 aaPredicted RBP12.35□□□□□ -0.43
RETREG3-212ENST00000593251 PRRT1Q99946 306 aa12.35□□□□□ -0.43
RETREG3-212ENST00000593251 SNRPGP15A8MWD9 76 aa12.34□□□□□ -0.43
RETREG3-212ENST00000593251 AKR1C4P17516 323 aa12.34□□□□□ -0.43
RETREG3-212ENST00000593251 GPX4P36969 197 aaPredicted RBP12.34□□□□□ -0.43
RETREG3-212ENST00000593251 OR1S1Q8NH92 325 aa12.34□□□□□ -0.43
RETREG3-212ENST00000593251 C16orf92Q96LL3 132 aa12.34□□□□□ -0.43
RETREG3-212ENST00000593251 TMEM208Q9BTX3 173 aa12.34□□□□□ -0.43
RETREG3-212ENST00000593251 RPRMQ9NS64 109 aa12.34□□□□□ -0.43
RETREG3-212ENST00000593251 IGKV1OR2-108A0A075B7D4 117 aa12.33□□□□□ -0.44
RETREG3-212ENST00000593251 A0A0B4J2A0 478 aa12.33□□□□□ -0.44
RETREG3-212ENST00000593251 IL18Q14116 193 aa12.33□□□□□ -0.44
RETREG3-212ENST00000593251 C17orf77Q96MU5 243 aa12.33□□□□□ -0.44
RETREG3-212ENST00000593251 SLC25A32Q9H2D1 315 aa12.33□□□□□ -0.44
RETREG3-212ENST00000593251 SLC25A22Q9H936 323 aa12.33□□□□□ -0.44
RETREG3-212ENST00000593251 DOK5Q9P104 306 aa12.33□□□□□ -0.44
RETREG3-212ENST00000593251 SHPKQ9UHJ6 478 aa12.33□□□□□ -0.44
RETREG3-212ENST00000593251 PAIP2BQ9ULR5 123 aaKnown RBP12.33□□□□□ -0.44
RETREG3-212ENST00000593251 TMED3Q9Y3Q3 217 aa12.33□□□□□ -0.44
RETREG3-212ENST00000593251 ZNF705GA8MUZ8 300 aaPredicted RBP12.32□□□□□ -0.44
RETREG3-212ENST00000593251 FABP1P07148 127 aa12.32□□□□□ -0.44
RETREG3-212ENST00000593251 SMIM18P0DKX4 95 aa12.32□□□□□ -0.44
RETREG3-212ENST00000593251 IAPPP10997 89 aa12.32□□□□□ -0.44
RETREG3-212ENST00000593251 ATP5IP56385 69 aaPredicted RBP12.32□□□□□ -0.44
RETREG3-212ENST00000593251 TNP2Q05952 138 aa12.32□□□□□ -0.44
RETREG3-212ENST00000593251 AMTNQ6UX39 209 aa12.32□□□□□ -0.44
RETREG3-212ENST00000593251 SCGB3A2Q96PL1 93 aa12.32□□□□□ -0.44
RETREG3-212ENST00000593251 TRGV9Q99603 122 aa12.32□□□□□ -0.44
RETREG3-212ENST00000593251 RABL2AQ9UBK7 228 aaPredicted RBP12.32□□□□□ -0.44
RETREG3-212ENST00000593251 RABL2BQ9UNT1 228 aa12.32□□□□□ -0.44
RETREG3-212ENST00000593251 ANKRD20A5PA0PJZ0 165 aa12.31□□□□□ -0.44
RETREG3-212ENST00000593251 M0R2Z0 102 aa12.31□□□□□ -0.44
RETREG3-212ENST00000593251 SPCS2Q15005 226 aa12.31□□□□□ -0.44
RETREG3-212ENST00000593251 IGFL4Q6B9Z1 124 aa12.31□□□□□ -0.44
RETREG3-212ENST00000593251 DIRAS2Q96HU8 199 aa12.31□□□□□ -0.44
RETREG3-212ENST00000593251 IGF2BP2-AS1Q96M15 143 aa12.31□□□□□ -0.44
RETREG3-212ENST00000593251 ATG101Q9BSB4 218 aa12.31□□□□□ -0.44
RETREG3-212ENST00000593251 RSG1Q9BU20 258 aa12.31□□□□□ -0.44
RETREG3-212ENST00000593251 SCP2D1Q9UJQ7 156 aa12.31□□□□□ -0.44
RETREG3-212ENST00000593251 A8MTW9 85 aa12.3□□□□□ -0.44
RETREG3-212ENST00000593251 CTDSPLO15194 276 aa12.3□□□□□ -0.44
RETREG3-212ENST00000593251 GALR1P47211 349 aa12.3□□□□□ -0.44
RETREG3-212ENST00000593251 MEOX2P50222 304 aa12.3□□□□□ -0.44
RETREG3-212ENST00000593251 SPINK13Q1W4C9 94 aa12.3□□□□□ -0.44
RETREG3-212ENST00000593251 C15orf53Q8NAA6 179 aa12.3□□□□□ -0.44
RETREG3-212ENST00000593251 MCUBQ9NWR8 336 aa12.3□□□□□ -0.44
RETREG3-212ENST00000593251 LRP1BQ9NZR2 4599 aa12.29□□□□□ -0.44
RETREG3-212ENST00000593251 ZNF98A6NK75 572 aa12.29□□□□□ -0.44
RETREG3-212ENST00000593251 C16orf90A8MZG2 172 aa12.29□□□□□ -0.44
RETREG3-212ENST00000593251 CRXO43186 299 aaPredicted RBP12.29□□□□□ -0.44
RETREG3-212ENST00000593251 DEFB130BP0DP73 79 aa12.29□□□□□ -0.44
RETREG3-212ENST00000593251 DEFB130AP0DP74 79 aa12.29□□□□□ -0.44
RETREG3-212ENST00000593251 GATA2P23769 480 aaPredicted RBP12.29□□□□□ -0.44
RETREG3-212ENST00000593251 CNN1P51911 297 aaKnown RBP12.29□□□□□ -0.44
RETREG3-212ENST00000593251 RAB11AP62491 216 aa12.29□□□□□ -0.44
RETREG3-212ENST00000593251 FCN2Q15485 313 aa12.29□□□□□ -0.44
RETREG3-212ENST00000593251 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.29□□□□□ -0.44
RETREG3-212ENST00000593251 THAP8Q8NA92 274 aa12.29□□□□□ -0.44
RETREG3-212ENST00000593251 OR11H7Q8NGC8 314 aa12.29□□□□□ -0.44
RETREG3-212ENST00000593251 PITX3O75364 302 aa12.28□□□□□ -0.44
RETREG3-212ENST00000593251 ANXA3P12429 323 aa12.28□□□□□ -0.44
RETREG3-212ENST00000593251 SRPXP78539 464 aa12.28□□□□□ -0.44
RETREG3-212ENST00000593251 SAMD13Q5VXD3 122 aa12.28□□□□□ -0.44
RETREG3-212ENST00000593251 TMEM182Q6ZP80 229 aaPredicted RBP12.28□□□□□ -0.44
RETREG3-212ENST00000593251 BAP18Q8IXM2 172 aa12.28□□□□□ -0.44
RETREG3-212ENST00000593251 RNF182Q8N6D2 247 aa12.28□□□□□ -0.44
RETREG3-212ENST00000593251 PIGBOS1A0A0B4J2F0 54 aa12.27□□□□□ -0.45
RETREG3-212ENST00000593251 NBDYA0A0U1RRE5 68 aa12.27□□□□□ -0.45
RETREG3-212ENST00000593251 LYRM9A8MSI8 78 aa12.27□□□□□ -0.45
RETREG3-212ENST00000593251 NUDT3O95989 172 aa12.27□□□□□ -0.45
RETREG3-212ENST00000593251 INSP01308 110 aa12.27□□□□□ -0.45
RETREG3-212ENST00000593251 ORM2P19652 201 aa12.27□□□□□ -0.45
RETREG3-212ENST00000593251 AZU1P20160 251 aa12.27□□□□□ -0.45
RETREG3-212ENST00000593251 FAM3BP58499 235 aaPredicted RBP12.27□□□□□ -0.45
RETREG3-212ENST00000593251 FGL1Q08830 312 aa12.27□□□□□ -0.45
RETREG3-212ENST00000593251 TRAV12-2A0A075B6T6 113 aa12.26□□□□□ -0.45
RETREG3-212ENST00000593251 TRAV8-2A0A0B4J237 113 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms