RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 PRR20AP86496 221 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 DEFB121Q5J5C9 76 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 C9orf66Q5T8R8 295 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 PATE2Q6UY27 113 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 S100A7AQ86SG5 101 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 GPHB5Q86YW7 130 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 OR9G4Q8NGQ1 327 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 OR1B1Q8NGR6 318 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 ST8SIA2Q92186 375 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 HYLS1Q96M11 299 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 SCRT1Q9BWW7 348 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 ZNF471Q9BX82 626 aaPredicted RBP7.3□□□□□ -1.24
DDX39A-220ENST00000593008 PEMTQ9UBM1 199 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 MLXQ9UH92 298 aa7.3□□□□□ -1.24
DDX39A-220ENST00000593008 TRAV5A0A0B4J249 113 aa7.29□□□□□ -1.24
DDX39A-220ENST00000593008 IZUMO1RA6ND01 250 aa7.29□□□□□ -1.24
DDX39A-220ENST00000593008 A8MWP6 167 aa7.29□□□□□ -1.24
DDX39A-220ENST00000593008 IFNA5P01569 189 aa7.29□□□□□ -1.24
DDX39A-220ENST00000593008 PRB4P10163 310 aaPredicted RBP7.29□□□□□ -1.24
DDX39A-220ENST00000593008 FOLR2P14207 255 aa7.29□□□□□ -1.24
DDX39A-220ENST00000593008 BMI1P35226 326 aa7.29□□□□□ -1.24
DDX39A-220ENST00000593008 B2MP61769 119 aa7.29□□□□□ -1.24
DDX39A-220ENST00000593008 RELQ04864 619 aaPredicted RBP7.29□□□□□ -1.24
DDX39A-220ENST00000593008 SSX7Q7RTT5 188 aa7.29□□□□□ -1.24
DDX39A-220ENST00000593008 Q8WTZ3 238 aa7.29□□□□□ -1.24
DDX39A-220ENST00000593008 TMEM37Q8WXS4 190 aa7.29□□□□□ -1.24
DDX39A-220ENST00000593008 PRR25Q96S07 402 aa7.29□□□□□ -1.24
DDX39A-220ENST00000593008 SLC39A9Q9NUM3 307 aa7.29□□□□□ -1.24
DDX39A-220ENST00000593008 A0A0D9SG52 128 aa7.28□□□□□ -1.24
DDX39A-220ENST00000593008 IGHV7-4-1A0A0J9YVY3 117 aa7.28□□□□□ -1.24
DDX39A-220ENST00000593008 KANTRA0A1W2PQU2 76 aa7.28□□□□□ -1.24
DDX39A-220ENST00000593008 SAP30O75446 220 aa7.28□□□□□ -1.24
DDX39A-220ENST00000593008 OR5G3P0C626 314 aa7.28□□□□□ -1.24
DDX39A-220ENST00000593008 FFAR4Q5NUL3 377 aa7.28□□□□□ -1.24
DDX39A-220ENST00000593008 SCGB1C1Q8TD33 95 aa7.28□□□□□ -1.24
DDX39A-220ENST00000593008 RNF2Q99496 336 aa7.28□□□□□ -1.24
DDX39A-220ENST00000593008 ARV1Q9H2C2 271 aa7.28□□□□□ -1.24
DDX39A-220ENST00000593008 SLC25A32Q9H2D1 315 aa7.28□□□□□ -1.24
DDX39A-220ENST00000593008 RNF24Q9Y225 148 aa7.28□□□□□ -1.24
DDX39A-220ENST00000593008 IGKV3-7A0A075B6H7 116 aa7.27□□□□□ -1.25
DDX39A-220ENST00000593008 H3BTX0 84 aa7.27□□□□□ -1.25
DDX39A-220ENST00000593008 LGALS9O00182 355 aa7.27□□□□□ -1.25
DDX39A-220ENST00000593008 CHEK1O14757 476 aa7.27□□□□□ -1.25
DDX39A-220ENST00000593008 HMGB3O15347 200 aaKnown RBP7.27□□□□□ -1.25
DDX39A-220ENST00000593008 CFDP00746 253 aaPredicted RBP7.27□□□□□ -1.25
DDX39A-220ENST00000593008 CD5P06127 495 aa7.27□□□□□ -1.25
DDX39A-220ENST00000593008 HNRNPCP07910 306 aaKnown RBP eCLIP7.27□□□□□ -1.25
DDX39A-220ENST00000593008 CBLN1P23435 193 aa7.27□□□□□ -1.25
DDX39A-220ENST00000593008 RPL29P47914 159 aaKnown RBP7.27□□□□□ -1.25
DDX39A-220ENST00000593008 ZNF266Q14584 549 aa7.27□□□□□ -1.25
DDX39A-220ENST00000593008 FAM74A1Q5RGS3 127 aa7.27□□□□□ -1.25
DDX39A-220ENST00000593008 MIR17HGQ75NE6 70 aa7.27□□□□□ -1.25
DDX39A-220ENST00000593008 NARS2Q96I59 477 aaKnown RBP7.27□□□□□ -1.25
DDX39A-220ENST00000593008 C17orf77Q96MU5 243 aa7.27□□□□□ -1.25
DDX39A-220ENST00000593008 GINS3Q9BRX5 216 aa7.27□□□□□ -1.25
DDX39A-220ENST00000593008 RHPN1-AS1Q9BWJ2 59 aa7.27□□□□□ -1.25
DDX39A-220ENST00000593008 PARD6GQ9BYG4 376 aaPredicted RBP7.27□□□□□ -1.25
DDX39A-220ENST00000593008 SLC25A22Q9H936 323 aa7.27□□□□□ -1.25
DDX39A-220ENST00000593008 DAZ1Q9NQZ3 744 aaKnown RBP7.27□□□□□ -1.25
DDX39A-220ENST00000593008 MRPL27Q9P0M9 148 aaKnown RBP7.27□□□□□ -1.25
DDX39A-220ENST00000593008 UFC1Q9Y3C8 167 aa7.27□□□□□ -1.25
DDX39A-220ENST00000593008 BORCS7-ASMTA0A0B4J1R7 106 aa7.26□□□□□ -1.25
DDX39A-220ENST00000593008 H3BRN7 92 aa7.26□□□□□ -1.25
DDX39A-220ENST00000593008 COX7A2P2O60397 106 aa7.26□□□□□ -1.25
DDX39A-220ENST00000593008 HYPMO75409 117 aa7.26□□□□□ -1.25
DDX39A-220ENST00000593008 CRYBB3P26998 211 aa7.26□□□□□ -1.25
DDX39A-220ENST00000593008 FHITP49789 147 aa7.26□□□□□ -1.25
DDX39A-220ENST00000593008 ZNF726P1Q15940 193 aa7.26□□□□□ -1.25
DDX39A-220ENST00000593008 CD300EQ496F6 205 aaPredicted RBP7.26□□□□□ -1.25
DDX39A-220ENST00000593008 FAM122CQ6P4D5 195 aa7.26□□□□□ -1.25
DDX39A-220ENST00000593008 TMED6Q8WW62 240 aa7.26□□□□□ -1.25
DDX39A-220ENST00000593008 METTL26Q96S19 204 aa7.26□□□□□ -1.25
DDX39A-220ENST00000593008 SLC25A39Q9BZJ4 359 aaPredicted RBP7.26□□□□□ -1.25
DDX39A-220ENST00000593008 SEPSECSQ9HD40 501 aaKnown RBP7.26□□□□□ -1.25
DDX39A-220ENST00000593008 SMPXQ9UHP9 88 aa7.26□□□□□ -1.25
DDX39A-220ENST00000593008 RABAC1Q9UI14 185 aa7.26□□□□□ -1.25
DDX39A-220ENST00000593008 HIGD1AQ9Y241 93 aa7.26□□□□□ -1.25
DDX39A-220ENST00000593008 U3KQE9 123 aa7.26□□□□□ -1.25
DDX39A-220ENST00000593008 TAAR5O14804 337 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 MPDU1O75352 247 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 JTBO76095 146 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 C8orf88P0DMB2 117 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 TFPI2P48307 235 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 PLP1P60201 277 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 SELENOTP62341 195 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 RAB31Q13636 194 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 C10orf113Q5VZT2 155 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 LINC00305Q7Z4B0 112 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 TMEM61Q8N0U2 210 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 GBGT1Q8N5D6 347 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 FAM24BQ8N5W8 94 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 ZNF709Q8N972 641 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 OR2G3Q8NGZ4 309 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 STOML3Q8TAV4 291 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 DYNLRB2Q8TF09 96 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 GLMPQ8WWB7 406 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 MARC2Q969Z3 335 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 PPP1R14BQ96C90 147 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 SHANK2-AS3Q9BTD1 123 aa7.25□□□□□ -1.25
DDX39A-220ENST00000593008 SLC25A2Q9BXI2 301 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms