RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 MEOX2P50222 304 aa13.56□□□□□ -0.24
CCDC43-205ENST00000592333 FAM210BQ96KR6 192 aa13.56□□□□□ -0.24
CCDC43-205ENST00000592333 TMED3Q9Y3Q3 217 aa13.56□□□□□ -0.24
CCDC43-205ENST00000592333 SOCS3O14543 225 aa13.55□□□□□ -0.24
CCDC43-205ENST00000592333 SPART-AS1P0CW21 52 aa13.55□□□□□ -0.24
CCDC43-205ENST00000592333 PAX9P55771 341 aa13.55□□□□□ -0.24
CCDC43-205ENST00000592333 ZNF90Q03938 601 aa13.55□□□□□ -0.24
CCDC43-205ENST00000592333 GGNBP1Q5YKI7 109 aa13.55□□□□□ -0.24
CCDC43-205ENST00000592333 THAP8Q8NA92 274 aa13.55□□□□□ -0.24
CCDC43-205ENST00000592333 NDUFAF3Q9BU61 184 aa13.55□□□□□ -0.24
CCDC43-205ENST00000592333 CELA1Q9UNI1 258 aa13.55□□□□□ -0.24
CCDC43-205ENST00000592333 H3BMQ9 156 aa13.54□□□□□ -0.24
CCDC43-205ENST00000592333 TOMM5Q8N4H5 51 aa13.54□□□□□ -0.24
CCDC43-205ENST00000592333 MCFD2Q8NI22 146 aa13.54□□□□□ -0.24
CCDC43-205ENST00000592333 RFNGQ9Y644 331 aa13.54□□□□□ -0.24
CCDC43-205ENST00000592333 LYZP61626 148 aa13.53□□□□□ -0.24
CCDC43-205ENST00000592333 ZNF79Q15937 498 aa13.53□□□□□ -0.24
CCDC43-205ENST00000592333 OR8I2Q8N0Y5 310 aa13.53□□□□□ -0.24
CCDC43-205ENST00000592333 POM121L12Q8N7R1 296 aa13.53□□□□□ -0.24
CCDC43-205ENST00000592333 OR4D5Q8NGN0 318 aa13.53□□□□□ -0.24
CCDC43-205ENST00000592333 COQ8AQ8NI60 647 aa13.53□□□□□ -0.24
CCDC43-205ENST00000592333 TRIM63Q969Q1 353 aa13.53□□□□□ -0.24
CCDC43-205ENST00000592333 WDR12Q9GZL7 423 aaKnown RBP13.53□□□□□ -0.24
CCDC43-205ENST00000592333 HECTD4Q9Y4D8 3996 aa13.52□□□□□ -0.24
CCDC43-205ENST00000592333 OXA1LQ15070 435 aa13.52□□□□□ -0.25
CCDC43-205ENST00000592333 EBLN2Q6P2I7 272 aa13.52□□□□□ -0.25
CCDC43-205ENST00000592333 TMED4Q7Z7H5 227 aa13.52□□□□□ -0.25
CCDC43-205ENST00000592333 LINC00052Q96N35 136 aa13.52□□□□□ -0.25
CCDC43-205ENST00000592333 GPR82Q96P67 336 aa13.52□□□□□ -0.25
CCDC43-205ENST00000592333 RPRMQ9NS64 109 aa13.52□□□□□ -0.25
CCDC43-205ENST00000592333 DNAH6Q9C0G6 4158 aa13.51□□□□□ -0.25
CCDC43-205ENST00000592333 SYNGR2O43760 224 aa13.51□□□□□ -0.25
CCDC43-205ENST00000592333 GALR1P47211 349 aa13.51□□□□□ -0.25
CCDC43-205ENST00000592333 PSG9Q00887 426 aa13.51□□□□□ -0.25
CCDC43-205ENST00000592333 GDF5OSQ5U4N7 250 aa13.51□□□□□ -0.25
CCDC43-205ENST00000592333 ZNF709Q8N972 641 aa13.51□□□□□ -0.25
CCDC43-205ENST00000592333 PPP1R14BQ96C90 147 aa13.51□□□□□ -0.25
CCDC43-205ENST00000592333 IGKV1OR2-108A0A075B7D4 117 aa13.5□□□□□ -0.25
CCDC43-205ENST00000592333 PRSS46E5RG02 174 aa13.5□□□□□ -0.25
CCDC43-205ENST00000592333 VAMP1P23763 118 aa13.5□□□□□ -0.25
CCDC43-205ENST00000592333 UBE2MP61081 183 aaKnown RBP13.5□□□□□ -0.25
CCDC43-205ENST00000592333 GOLT1BQ9Y3E0 138 aa13.5□□□□□ -0.25
CCDC43-205ENST00000592333 A0A0J9YX75 114 aa13.49□□□□□ -0.25
CCDC43-205ENST00000592333 A8MTW9 85 aa13.49□□□□□ -0.25
CCDC43-205ENST00000592333 SFT2D2O95562 160 aa13.49□□□□□ -0.25
CCDC43-205ENST00000592333 PYDC2Q56P42 97 aa13.49□□□□□ -0.25
CCDC43-205ENST00000592333 BPIFCQ8NFQ6 507 aa13.49□□□□□ -0.25
CCDC43-205ENST00000592333 OR4B1Q8NGF8 309 aa13.49□□□□□ -0.25
CCDC43-205ENST00000592333 DKK2Q9UBU2 259 aa13.49□□□□□ -0.25
CCDC43-205ENST00000592333 ZNF98A6NK75 572 aa13.48□□□□□ -0.25
CCDC43-205ENST00000592333 IAPPP10997 89 aa13.48□□□□□ -0.25
CCDC43-205ENST00000592333 S100A5P33763 92 aa13.48□□□□□ -0.25
CCDC43-205ENST00000592333 OR2F1Q13607 317 aa13.48□□□□□ -0.25
CCDC43-205ENST00000592333 OR1B1Q8NGR6 318 aa13.48□□□□□ -0.25
CCDC43-205ENST00000592333 C16orf92Q96LL3 132 aa13.48□□□□□ -0.25
CCDC43-205ENST00000592333 DOK5Q9P104 306 aa13.48□□□□□ -0.25
CCDC43-205ENST00000592333 V9GYH0 126 aa13.48□□□□□ -0.25
CCDC43-205ENST00000592333 IGKV3-20P01619 116 aa13.47□□□□□ -0.25
CCDC43-205ENST00000592333 HBE1P02100 147 aa13.47□□□□□ -0.25
CCDC43-205ENST00000592333 FAM78BQ5VT40 261 aa13.47□□□□□ -0.25
CCDC43-205ENST00000592333 ZNF767PQ75MW2 155 aa13.47□□□□□ -0.25
CCDC43-205ENST00000592333 NIPSNAP3BQ9BS92 247 aa13.47□□□□□ -0.25
CCDC43-205ENST00000592333 HERC2O95714 4834 aa13.46□□□□□ -0.25
CCDC43-205ENST00000592333 B2MP61769 119 aa13.46□□□□□ -0.25
CCDC43-205ENST00000592333 ID3Q02535 119 aa13.46□□□□□ -0.25
CCDC43-205ENST00000592333 PPP1R1AQ13522 171 aa13.46□□□□□ -0.25
CCDC43-205ENST00000592333 LGALS9BQ3B8N2 356 aa13.46□□□□□ -0.25
CCDC43-205ENST00000592333 TMEM144Q7Z5S9 345 aa13.46□□□□□ -0.25
CCDC43-205ENST00000592333 S100A7AQ86SG5 101 aa13.46□□□□□ -0.25
CCDC43-205ENST00000592333 PAIP2BQ9ULR5 123 aaKnown RBP13.46□□□□□ -0.25
CCDC43-205ENST00000592333 STRAPQ9Y3F4 350 aaKnown RBP13.46□□□□□ -0.25
CCDC43-205ENST00000592333 IGHV3OR16-12A0A075B7B8 117 aa13.45□□□□□ -0.26
CCDC43-205ENST00000592333 WRBO00258 174 aa13.45□□□□□ -0.26
CCDC43-205ENST00000592333 DUSP14O95147 198 aaKnown RBP13.45□□□□□ -0.26
CCDC43-205ENST00000592333 IFNA21P01568 189 aa13.45□□□□□ -0.26
CCDC43-205ENST00000592333 RRN3P1Q2M238 152 aa13.45□□□□□ -0.26
CCDC43-205ENST00000592333 RNF212Q495C1 297 aa13.45□□□□□ -0.26
CCDC43-205ENST00000592333 FAM222AQ5U5X8 452 aa13.45□□□□□ -0.26
CCDC43-205ENST00000592333 C1orf158Q8N1D5 194 aa13.45□□□□□ -0.26
CCDC43-205ENST00000592333 C7orf50Q9BRJ6 194 aaKnown RBP13.45□□□□□ -0.26
CCDC43-205ENST00000592333 RSG1Q9BU20 258 aa13.45□□□□□ -0.26
CCDC43-205ENST00000592333 TMEM147Q9BVK8 224 aa13.45□□□□□ -0.26
CCDC43-205ENST00000592333 SLC35B3Q9H1N7 401 aa13.45□□□□□ -0.26
CCDC43-205ENST00000592333 SLC25A32Q9H2D1 315 aa13.45□□□□□ -0.26
CCDC43-205ENST00000592333 RNF24Q9Y225 148 aa13.45□□□□□ -0.26
CCDC43-205ENST00000592333 EMP1P54849 157 aa13.44□□□□□ -0.26
CCDC43-205ENST00000592333 FXYD7P58549 80 aa13.44□□□□□ -0.26
CCDC43-205ENST00000592333 DEFB1P60022 68 aa13.44□□□□□ -0.26
CCDC43-205ENST00000592333 SPANXN5Q5MJ07 72 aa13.44□□□□□ -0.26
CCDC43-205ENST00000592333 CCDC190Q86UF4 302 aa13.44□□□□□ -0.26
CCDC43-205ENST00000592333 IGF2BP2-AS1Q96M15 143 aa13.44□□□□□ -0.26
CCDC43-205ENST00000592333 SLC25A22Q9H936 323 aa13.44□□□□□ -0.26
CCDC43-205ENST00000592333 LOC102723971A0A1B0GUV8 181 aa13.43□□□□□ -0.26
CCDC43-205ENST00000592333 NAP1L6A6NFF2 107 aa13.43□□□□□ -0.26
CCDC43-205ENST00000592333 HOXB5P09067 269 aa13.43□□□□□ -0.26
CCDC43-205ENST00000592333 ORM2P19652 201 aa13.43□□□□□ -0.26
CCDC43-205ENST00000592333 PLP1P60201 277 aa13.43□□□□□ -0.26
CCDC43-205ENST00000592333 SELENOTP62341 195 aa13.43□□□□□ -0.26
CCDC43-205ENST00000592333 AKR1C1Q04828 323 aa13.43□□□□□ -0.26
CCDC43-205ENST00000592333 AMTNQ6UX39 209 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms