RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 MBNL2Q5VZF2 373 aaKnown RBP12.28□□□□□ -0.44
CIRBP-228ENST00000590347 MGAQ8IWI9 3026 aa12.28□□□□□ -0.44
CIRBP-228ENST00000590347 TMSB15BA0A087X1C1 80 aa12.27□□□□□ -0.44
CIRBP-228ENST00000590347 REG1BP48304 166 aa12.27□□□□□ -0.44
CIRBP-228ENST00000590347 ZNF134P52741 427 aa12.27□□□□□ -0.44
CIRBP-228ENST00000590347 ZNF329Q86UD4 541 aa12.27□□□□□ -0.44
CIRBP-228ENST00000590347 LOXL2Q9Y4K0 774 aa12.27□□□□□ -0.44
CIRBP-228ENST00000590347 C16orf97H3BN30 126 aa12.27□□□□□ -0.45
CIRBP-228ENST00000590347 CNIH1O95406 144 aa12.27□□□□□ -0.45
CIRBP-228ENST00000590347 APELAP0DMC3 54 aa12.27□□□□□ -0.45
CIRBP-228ENST00000590347 PAXXQ9BUH6 204 aa12.27□□□□□ -0.45
CIRBP-228ENST00000590347 RPP21Q9H633 154 aaKnown RBP12.27□□□□□ -0.45
CIRBP-228ENST00000590347 DKK1O94907 266 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 SPINK8P0C7L1 97 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 ARMS2P0C7Q2 107 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 BOD1L2Q8IYS8 172 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 MRAP2Q96G30 205 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 S1PR3Q99500 378 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 IGHV1-45A0A0A0MS14 117 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 B5MCH6 92 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 SPINT2O43291 252 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 DAZAP1Q96EP5 407 aaKnown RBP12.26□□□□□ -0.45
CIRBP-228ENST00000590347 FAM167A-AS1Q96KT0 104 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 OBP2BQ9NPH6 170 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 COL5A1P20908 1838 aaPredicted RBP12.26□□□□□ -0.45
CIRBP-228ENST00000590347 A0A1B0GWB2 263 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 SMKR1H3BMG3 65 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 COX6A1P12074 109 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 ORM2P19652 201 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 RPS19BP1Q86WX3 136 aaKnown RBP12.26□□□□□ -0.45
CIRBP-228ENST00000590347 SYT8Q8NBV8 401 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 DDB2Q92466 427 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 DMXL2Q8TDJ6 3036 aa12.26□□□□□ -0.45
CIRBP-228ENST00000590347 PLP2Q04941 152 aa12.25□□□□□ -0.45
CIRBP-228ENST00000590347 OOEPA6NGQ2 149 aa12.25□□□□□ -0.45
CIRBP-228ENST00000590347 SP1P08047 785 aa12.25□□□□□ -0.45
CIRBP-228ENST00000590347 SCGB1A1P11684 91 aa12.25□□□□□ -0.45
CIRBP-228ENST00000590347 KIR2DL2P43627 348 aaPredicted RBP12.25□□□□□ -0.45
CIRBP-228ENST00000590347 SSR4P51571 173 aa12.25□□□□□ -0.45
CIRBP-228ENST00000590347 IL11RAQ14626 422 aa12.25□□□□□ -0.45
CIRBP-228ENST00000590347 LINC00596Q86U02 117 aa12.25□□□□□ -0.45
CIRBP-228ENST00000590347 ZBTB34Q8NCN2 500 aa12.25□□□□□ -0.45
CIRBP-228ENST00000590347 LINC00470Q9BZP3 86 aa12.25□□□□□ -0.45
CIRBP-228ENST00000590347 SLC25A10Q9UBX3 287 aaPredicted RBP12.25□□□□□ -0.45
CIRBP-228ENST00000590347 COX7A2P2O60397 106 aa12.24□□□□□ -0.45
CIRBP-228ENST00000590347 B3GALT5-AS1P59052 145 aa12.24□□□□□ -0.45
CIRBP-228ENST00000590347 BOKQ9UMX3 212 aaPredicted RBP12.24□□□□□ -0.45
CIRBP-228ENST00000590347 LINC01548A6NM66 108 aa12.24□□□□□ -0.45
CIRBP-228ENST00000590347 COL8A1P27658 744 aa12.24□□□□□ -0.45
CIRBP-228ENST00000590347 FOLR3P41439 243 aa12.24□□□□□ -0.45
CIRBP-228ENST00000590347 RASL11AQ6T310 242 aa12.24□□□□□ -0.45
CIRBP-228ENST00000590347 PTH2Q96A98 100 aa12.24□□□□□ -0.45
CIRBP-228ENST00000590347 RTL8AQ9BWD3 113 aa12.24□□□□□ -0.45
CIRBP-228ENST00000590347 A0A096LNJ9 63 aa12.24□□□□□ -0.45
CIRBP-228ENST00000590347 NTN3O00634 580 aaPredicted RBP12.24□□□□□ -0.45
CIRBP-228ENST00000590347 TGFAP01135 160 aa12.24□□□□□ -0.45
CIRBP-228ENST00000590347 TMPRSS3P57727 454 aa12.24□□□□□ -0.45
CIRBP-228ENST00000590347 ITLN1Q8WWA0 313 aa12.24□□□□□ -0.45
CIRBP-228ENST00000590347 PINLYPA6NC86 204 aa12.23□□□□□ -0.45
CIRBP-228ENST00000590347 FKBP2P26885 142 aaKnown RBP12.23□□□□□ -0.45
CIRBP-228ENST00000590347 HERV-K104P63124 156 aa12.23□□□□□ -0.45
CIRBP-228ENST00000590347 PRR33A8MZF0 331 aa12.23□□□□□ -0.45
CIRBP-228ENST00000590347 CSN1S1P47710 185 aa12.23□□□□□ -0.45
CIRBP-228ENST00000590347 Q0VFX4 171 aa12.23□□□□□ -0.45
CIRBP-228ENST00000590347 IMMP1LQ96LU5 166 aa12.23□□□□□ -0.45
CIRBP-228ENST00000590347 PSG8Q9UQ74 426 aa12.23□□□□□ -0.45
CIRBP-228ENST00000590347 IGHV3OR15-7A0A075B7D8 119 aa12.22□□□□□ -0.45
CIRBP-228ENST00000590347 J3QR89 54 aa12.22□□□□□ -0.45
CIRBP-228ENST00000590347 OSR1Q8TAX0 266 aaPredicted RBP12.22□□□□□ -0.45
CIRBP-228ENST00000590347 C7orf69Q9H7B7 122 aa12.22□□□□□ -0.45
CIRBP-228ENST00000590347 PRRG2O14669 202 aa12.22□□□□□ -0.45
CIRBP-228ENST00000590347 SPINK14Q6IE38 97 aa12.22□□□□□ -0.45
CIRBP-228ENST00000590347 GTSCR1Q86UQ5 136 aa12.22□□□□□ -0.45
CIRBP-228ENST00000590347 RND1Q92730 232 aa12.22□□□□□ -0.45
CIRBP-228ENST00000590347 hADV38S2A0JD32 116 aa12.22□□□□□ -0.45
CIRBP-228ENST00000590347 FHL3Q13643 280 aa12.22□□□□□ -0.45
CIRBP-228ENST00000590347 INO80CQ6PI98 192 aaPredicted RBP12.22□□□□□ -0.45
CIRBP-228ENST00000590347 PRNTQ86SH4 94 aa12.22□□□□□ -0.45
CIRBP-228ENST00000590347 SRSF12Q8WXF0 261 aaKnown RBP12.22□□□□□ -0.45
CIRBP-228ENST00000590347 POLEQ07864 2286 aa12.21□□□□□ -0.45
CIRBP-228ENST00000590347 MED13Q9UHV7 2174 aa12.21□□□□□ -0.45
CIRBP-228ENST00000590347 FAM90A27PA6NNH2 459 aa12.21□□□□□ -0.45
CIRBP-228ENST00000590347 HSPE1P61604 102 aaKnown RBP12.21□□□□□ -0.45
CIRBP-228ENST00000590347 FAM162BQ5T6X4 162 aa12.21□□□□□ -0.45
CIRBP-228ENST00000590347 PATE2Q6UY27 113 aa12.21□□□□□ -0.45
CIRBP-228ENST00000590347 RBPMS2Q6ZRY4 209 aaKnown RBP12.21□□□□□ -0.45
CIRBP-228ENST00000590347 FAM231DQ6ZW35 169 aa12.21□□□□□ -0.45
CIRBP-228ENST00000590347 ZNF414Q96IQ9 312 aa12.21□□□□□ -0.45
CIRBP-228ENST00000590347 ZNF479Q96JC4 524 aa12.21□□□□□ -0.45
CIRBP-228ENST00000590347 SPATA25Q9BR10 227 aa12.21□□□□□ -0.45
CIRBP-228ENST00000590347 HES7Q9BYE0 225 aa12.21□□□□□ -0.45
CIRBP-228ENST00000590347 PKIBQ9C010 78 aa12.21□□□□□ -0.45
CIRBP-228ENST00000590347 C15orf61A6NNL5 157 aa12.21□□□□□ -0.46
CIRBP-228ENST00000590347 NPIPB6E9PJ23 425 aa12.21□□□□□ -0.46
CIRBP-228ENST00000590347 CT45A6P0DMU7 189 aa12.21□□□□□ -0.46
CIRBP-228ENST00000590347 CT45A5P0DMU8 189 aa12.21□□□□□ -0.46
CIRBP-228ENST00000590347 CT45A7P0DMV0 189 aa12.21□□□□□ -0.46
CIRBP-228ENST00000590347 ERVK11-1P61568 191 aa12.21□□□□□ -0.46
CIRBP-228ENST00000590347 CT45A1Q5HYN5 189 aa12.21□□□□□ -0.46
CIRBP-228ENST00000590347 MDP1Q86V88 176 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms