RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 DNAH3Q8TD57 4116 aa9.12□□□□□ -0.95
APOC1-206ENST00000590334 ELOA3CA0A087WX78 387 aaPredicted RBP9.12□□□□□ -0.95
APOC1-206ENST00000590334 BCL2L11O43521 198 aa9.12□□□□□ -0.95
APOC1-206ENST00000590334 HYPMO75409 117 aa9.12□□□□□ -0.95
APOC1-206ENST00000590334 APOHP02749 345 aaPredicted RBP9.12□□□□□ -0.95
APOC1-206ENST00000590334 ORM2P19652 201 aa9.12□□□□□ -0.95
APOC1-206ENST00000590334 B2MP61769 119 aa9.12□□□□□ -0.95
APOC1-206ENST00000590334 DEFB114Q30KQ6 69 aa9.12□□□□□ -0.95
APOC1-206ENST00000590334 PATE2Q6UY27 113 aa9.12□□□□□ -0.95
APOC1-206ENST00000590334 Q6ZRG5 221 aa9.12□□□□□ -0.95
APOC1-206ENST00000590334 OR2K2Q8NGT1 345 aa9.12□□□□□ -0.95
APOC1-206ENST00000590334 PSMG3Q9BT73 122 aaPredicted RBP9.12□□□□□ -0.95
APOC1-206ENST00000590334 RSG1Q9BU20 258 aa9.12□□□□□ -0.95
APOC1-206ENST00000590334 PBDC1Q9BVG4 233 aa9.12□□□□□ -0.95
APOC1-206ENST00000590334 RHPN1-AS1Q9BWJ2 59 aa9.12□□□□□ -0.95
APOC1-206ENST00000590334 PFDN2Q9UHV9 154 aa9.12□□□□□ -0.95
APOC1-206ENST00000590334 KANTRA0A1W2PQU2 76 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 A0A1W2PS18 150 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 BUB3O43684 328 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 PFDN1O60925 122 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 S100A7P31151 101 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 BMI1P35226 326 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 C1orf194Q5T5A4 169 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 SAMD5Q5TGI4 173 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 LAMTOR1Q6IAA8 161 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 C16orf54Q6UWD8 224 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 S100A7AQ86SG5 101 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 C9orf62Q8N4C0 152 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 OR1L4Q8NGR5 311 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 OR1B1Q8NGR6 318 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 OR2G3Q8NGZ4 309 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 TMEM37Q8WXS4 190 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 ST8SIA2Q92186 375 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 NARS2Q96I59 477 aaKnown RBP9.11□□□□□ -0.95
APOC1-206ENST00000590334 PFDN5Q99471 154 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 TMEM231Q9H6L2 316 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 DNAJC4Q9NNZ3 241 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 HIGD1AQ9Y241 93 aa9.11□□□□□ -0.95
APOC1-206ENST00000590334 IGHV3-49A0A0A0MS15 119 aa9.1□□□□□ -0.95
APOC1-206ENST00000590334 H3BRN7 92 aa9.1□□□□□ -0.95
APOC1-206ENST00000590334 CD5P06127 495 aa9.1□□□□□ -0.95
APOC1-206ENST00000590334 ATP6V0CP27449 155 aa9.1□□□□□ -0.95
APOC1-206ENST00000590334 SERF2P84101 59 aa9.1□□□□□ -0.95
APOC1-206ENST00000590334 EGFEM1PQ0D2K5 195 aa9.1□□□□□ -0.95
APOC1-206ENST00000590334 OXLD1Q5BKU9 147 aa9.1□□□□□ -0.95
APOC1-206ENST00000590334 FAM90A2PQ658T7 463 aa9.1□□□□□ -0.95
APOC1-206ENST00000590334 HSD17B11Q8NBQ5 300 aa9.1□□□□□ -0.95
APOC1-206ENST00000590334 DYNLRB2Q8TF09 96 aa9.1□□□□□ -0.95
APOC1-206ENST00000590334 GATAD1Q8WUU5 269 aa9.1□□□□□ -0.95
APOC1-206ENST00000590334 GLMPQ8WWB7 406 aa9.1□□□□□ -0.95
APOC1-206ENST00000590334 GNPNAT1Q96EK6 184 aaPredicted RBP9.1□□□□□ -0.95
APOC1-206ENST00000590334 GRAMD2BQ96HH9 432 aa9.1□□□□□ -0.95
APOC1-206ENST00000590334 SLC25A39Q9BZJ4 359 aaPredicted RBP9.1□□□□□ -0.95
APOC1-206ENST00000590334 DOK5Q9P104 306 aa9.1□□□□□ -0.95
APOC1-206ENST00000590334 TRAV25A0A0B4J276 109 aa9.09□□□□□ -0.95
APOC1-206ENST00000590334 ZNF98A6NK75 572 aa9.09□□□□□ -0.95
APOC1-206ENST00000590334 COX7A2P2O60397 106 aa9.09□□□□□ -0.95
APOC1-206ENST00000590334 OR5G3P0C626 314 aa9.09□□□□□ -0.95
APOC1-206ENST00000590334 CD300EQ496F6 205 aaPredicted RBP9.09□□□□□ -0.95
APOC1-206ENST00000590334 FFAR4Q5NUL3 377 aa9.09□□□□□ -0.95
APOC1-206ENST00000590334 C10orf113Q5VZT2 155 aa9.09□□□□□ -0.95
APOC1-206ENST00000590334 STOML3Q8TAV4 291 aa9.09□□□□□ -0.95
APOC1-206ENST00000590334 RNF2Q99496 336 aa9.09□□□□□ -0.95
APOC1-206ENST00000590334 SHANK2-AS3Q9BTD1 123 aa9.09□□□□□ -0.95
APOC1-206ENST00000590334 RNF24Q9Y225 148 aa9.09□□□□□ -0.95
APOC1-206ENST00000590334 RFNGQ9Y644 331 aa9.09□□□□□ -0.95
APOC1-206ENST00000590334 NBEAL1Q6ZS30 2694 aa9.08□□□□□ -0.96
APOC1-206ENST00000590334 IGHV3OR16-13A0A075B7E8 117 aa9.08□□□□□ -0.96
APOC1-206ENST00000590334 IGHV3-74A0A0B4J1X5 117 aa9.08□□□□□ -0.96
APOC1-206ENST00000590334 IGHV3-66A0A0C4DH42 116 aa9.08□□□□□ -0.96
APOC1-206ENST00000590334 G3V4G9 280 aa9.08□□□□□ -0.96
APOC1-206ENST00000590334 SPP1P10451 314 aa9.08□□□□□ -0.96
APOC1-206ENST00000590334 KPRPQ5T749 579 aaPredicted RBP9.08□□□□□ -0.96
APOC1-206ENST00000590334 LCN12Q6JVE5 192 aa9.08□□□□□ -0.96
APOC1-206ENST00000590334 LINC00305Q7Z4B0 112 aa9.08□□□□□ -0.96
APOC1-206ENST00000590334 TMEM61Q8N0U2 210 aa9.08□□□□□ -0.96
APOC1-206ENST00000590334 UHRF2Q96PU4 802 aa9.08□□□□□ -0.96
APOC1-206ENST00000590334 ZNF471Q9BX82 626 aaPredicted RBP9.08□□□□□ -0.96
APOC1-206ENST00000590334 SH3BGRL3Q9H299 93 aa9.08□□□□□ -0.96
APOC1-206ENST00000590334 IZUMO1RA6ND01 250 aa9.07□□□□□ -0.96
APOC1-206ENST00000590334 HELTA6NFD8 242 aa9.07□□□□□ -0.96
APOC1-206ENST00000590334 TSPAN4O14817 238 aa9.07□□□□□ -0.96
APOC1-206ENST00000590334 M6PRP20645 277 aa9.07□□□□□ -0.96
APOC1-206ENST00000590334 C4BPBP20851 252 aa9.07□□□□□ -0.96
APOC1-206ENST00000590334 NKX2-5P52952 324 aaPredicted RBP9.07□□□□□ -0.96
APOC1-206ENST00000590334 EIF5AP63241 154 aaKnown RBP9.07□□□□□ -0.96
APOC1-206ENST00000590334 ACOT6Q3I5F7 207 aaPredicted RBP9.07□□□□□ -0.96
APOC1-206ENST00000590334 GCSAMLQ5JQS6 135 aa9.07□□□□□ -0.96
APOC1-206ENST00000590334 MORN5Q5VZ52 161 aa9.07□□□□□ -0.96
APOC1-206ENST00000590334 TCF24Q7RTU0 167 aa9.07□□□□□ -0.96
APOC1-206ENST00000590334 PPP1R14BQ96C90 147 aa9.07□□□□□ -0.96
APOC1-206ENST00000590334 GPR82Q96P67 336 aa9.07□□□□□ -0.96
APOC1-206ENST00000590334 SCRT1Q9BWW7 348 aa9.07□□□□□ -0.96
APOC1-206ENST00000590334 SLC25A32Q9H2D1 315 aa9.07□□□□□ -0.96
APOC1-206ENST00000590334 ZMAT5Q9UDW3 170 aaKnown RBP9.07□□□□□ -0.96
APOC1-206ENST00000590334 ZNF785A8K8V0 405 aa9.06□□□□□ -0.96
APOC1-206ENST00000590334 MBP02144 154 aa9.06□□□□□ -0.96
APOC1-206ENST00000590334 SEC11BP0C7V7 166 aa9.06□□□□□ -0.96
APOC1-206ENST00000590334 TPT1P13693 172 aaKnown RBP9.06□□□□□ -0.96
APOC1-206ENST00000590334 BEAN1Q3B7T3 259 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms