RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 AGPAT2O15120 278 aa15.92■□□□□ 0.14
ATG4D-212ENST00000590096 FRMD6-AS1P0C7T7 363 aa15.92■□□□□ 0.14
ATG4D-212ENST00000590096 LINC00869P0C866 280 aa15.92■□□□□ 0.14
ATG4D-212ENST00000590096 AP2S1P53680 142 aaPredicted RBP15.92■□□□□ 0.14
ATG4D-212ENST00000590096 NHLH2Q02577 135 aa15.92■□□□□ 0.14
ATG4D-212ENST00000590096 VWC2Q2TAL6 325 aa15.92■□□□□ 0.14
ATG4D-212ENST00000590096 WFDC3Q8IUB2 231 aa15.92■□□□□ 0.14
ATG4D-212ENST00000590096 DEFB125Q8N687 156 aa15.92■□□□□ 0.14
ATG4D-212ENST00000590096 STXBP6Q8NFX7 210 aa15.92■□□□□ 0.14
ATG4D-212ENST00000590096 OR5C1Q8NGR4 320 aa15.92■□□□□ 0.14
ATG4D-212ENST00000590096 ASB13Q8WXK3 278 aa15.92■□□□□ 0.14
ATG4D-212ENST00000590096 WFDC10AQ9H1F0 79 aa15.92■□□□□ 0.14
ATG4D-212ENST00000590096 SLC45A2Q9UMX9 530 aa15.92■□□□□ 0.14
ATG4D-212ENST00000590096 SIGLEC15Q6ZMC9 328 aa15.91■□□□□ 0.14
ATG4D-212ENST00000590096 MGST2Q99735 147 aa15.91■□□□□ 0.14
ATG4D-212ENST00000590096 SRD5A3Q9H8P0 318 aa15.91■□□□□ 0.14
ATG4D-212ENST00000590096 C19orf73Q9NVV2 129 aa15.91■□□□□ 0.14
ATG4D-212ENST00000590096 FBXL17Q9UF56 701 aa15.91■□□□□ 0.14
ATG4D-212ENST00000590096 UBQLN2Q9UHD9 624 aa15.91■□□□□ 0.14
ATG4D-212ENST00000590096 WDR83OSQ9Y284 106 aa15.91■□□□□ 0.14
ATG4D-212ENST00000590096 TRAV2A0A0B4J234 112 aa15.9■□□□□ 0.14
ATG4D-212ENST00000590096 GIPP09681 153 aaPredicted RBP15.9■□□□□ 0.14
ATG4D-212ENST00000590096 CAMLGP49069 296 aa15.9■□□□□ 0.14
ATG4D-212ENST00000590096 CMC4P56277 68 aaPredicted RBP15.9■□□□□ 0.14
ATG4D-212ENST00000590096 RAP2BP61225 183 aa15.9■□□□□ 0.14
ATG4D-212ENST00000590096 FGL1Q08830 312 aa15.9■□□□□ 0.14
ATG4D-212ENST00000590096 C1orf194Q5T5A4 169 aa15.9■□□□□ 0.14
ATG4D-212ENST00000590096 S100A7AQ86SG5 101 aa15.9■□□□□ 0.14
ATG4D-212ENST00000590096 DOK5Q9P104 306 aa15.9■□□□□ 0.14
ATG4D-212ENST00000590096 HIGD1AQ9Y241 93 aa15.9■□□□□ 0.14
ATG4D-212ENST00000590096 HYPMO75409 117 aa15.89■□□□□ 0.13
ATG4D-212ENST00000590096 RPL12P30050 165 aaKnown RBP15.89■□□□□ 0.13
ATG4D-212ENST00000590096 PLP1P60201 277 aa15.89■□□□□ 0.13
ATG4D-212ENST00000590096 CLINT1Q14677 625 aa15.89■□□□□ 0.13
ATG4D-212ENST00000590096 FAM110AQ9BQ89 295 aa15.89■□□□□ 0.13
ATG4D-212ENST00000590096 OR5G3P0C626 314 aa15.88■□□□□ 0.13
ATG4D-212ENST00000590096 LYL1P12980 280 aa15.88■□□□□ 0.13
ATG4D-212ENST00000590096 FGF7P21781 194 aa15.88■□□□□ 0.13
ATG4D-212ENST00000590096 ODF3L2Q3SX64 289 aa15.88■□□□□ 0.13
ATG4D-212ENST00000590096 PXDC1Q5TGL8 231 aa15.88■□□□□ 0.13
ATG4D-212ENST00000590096 OR8I2Q8N0Y5 310 aa15.88■□□□□ 0.13
ATG4D-212ENST00000590096 STPG3Q8N7X2 389 aa15.88■□□□□ 0.13
ATG4D-212ENST00000590096 ASCL2Q99929 193 aa15.88■□□□□ 0.13
ATG4D-212ENST00000590096 ARL6Q9H0F7 186 aa15.88■□□□□ 0.13
ATG4D-212ENST00000590096 HSPB11Q9Y547 144 aa15.88■□□□□ 0.13
ATG4D-212ENST00000590096 ZNF98A6NK75 572 aa15.87■□□□□ 0.13
ATG4D-212ENST00000590096 MPDU1O75352 247 aa15.87■□□□□ 0.13
ATG4D-212ENST00000590096 SLC25A22Q9H936 323 aa15.87■□□□□ 0.13
ATG4D-212ENST00000590096 Q6ZRG5 221 aa15.86■□□□□ 0.13
ATG4D-212ENST00000590096 GGTLC1Q9BX51 225 aa15.86■□□□□ 0.13
ATG4D-212ENST00000590096 SLC25A39Q9BZJ4 359 aaPredicted RBP15.86■□□□□ 0.13
ATG4D-212ENST00000590096 NRN1Q9NPD7 142 aa15.86■□□□□ 0.13
ATG4D-212ENST00000590096 DNAH9Q9NYC9 4486 aa15.85■□□□□ 0.13
ATG4D-212ENST00000590096 H3BRN7 92 aa15.85■□□□□ 0.13
ATG4D-212ENST00000590096 K7EQG2 157 aa15.85■□□□□ 0.13
ATG4D-212ENST00000590096 NHLRC4P0CG21 123 aaPredicted RBP15.85■□□□□ 0.13
ATG4D-212ENST00000590096 MIC13Q5XKP0 118 aa15.85■□□□□ 0.13
ATG4D-212ENST00000590096 SBSPONQ8IVN8 264 aa15.85■□□□□ 0.13
ATG4D-212ENST00000590096 ATP5SQ99766 215 aa15.85■□□□□ 0.13
ATG4D-212ENST00000590096 ARV1Q9H2C2 271 aa15.85■□□□□ 0.13
ATG4D-212ENST00000590096 MAP6D1Q9H9H5 199 aa15.85■□□□□ 0.13
ATG4D-212ENST00000590096 COX7A2P2O60397 106 aa15.84■□□□□ 0.13
ATG4D-212ENST00000590096 GALR1P47211 349 aa15.84■□□□□ 0.13
ATG4D-212ENST00000590096 RPL29P47914 159 aaKnown RBP15.84■□□□□ 0.13
ATG4D-212ENST00000590096 OPCMLQ14982 345 aa15.84■□□□□ 0.13
ATG4D-212ENST00000590096 DCANP1Q8TF63 244 aa15.84■□□□□ 0.13
ATG4D-212ENST00000590096 CHAC2Q8WUX2 184 aa15.84■□□□□ 0.13
ATG4D-212ENST00000590096 GPR82Q96P67 336 aa15.84■□□□□ 0.13
ATG4D-212ENST00000590096 SHANK2-AS3Q9BTD1 123 aa15.84■□□□□ 0.13
ATG4D-212ENST00000590096 RNF24Q9Y225 148 aa15.84■□□□□ 0.13
ATG4D-212ENST00000590096 ELOA3CA0A087WX78 387 aaPredicted RBP15.83■□□□□ 0.12
ATG4D-212ENST00000590096 B2MP61769 119 aa15.83■□□□□ 0.12
ATG4D-212ENST00000590096 APRG1Q8IVJ8 170 aa15.83■□□□□ 0.12
ATG4D-212ENST00000590096 FAM24BQ8N5W8 94 aa15.83■□□□□ 0.12
ATG4D-212ENST00000590096 OR1L4Q8NGR5 311 aa15.83■□□□□ 0.12
ATG4D-212ENST00000590096 OR2T35Q8NGX2 323 aa15.83■□□□□ 0.12
ATG4D-212ENST00000590096 UHRF2Q96PU4 802 aa15.83■□□□□ 0.12
ATG4D-212ENST00000590096 SCRT1Q9BWW7 348 aa15.83■□□□□ 0.12
ATG4D-212ENST00000590096 NPCDR1Q9BY65 106 aa15.83■□□□□ 0.12
ATG4D-212ENST00000590096 SMIM3Q9BZL3 60 aa15.83■□□□□ 0.12
ATG4D-212ENST00000590096 SLC25A32Q9H2D1 315 aa15.83■□□□□ 0.12
ATG4D-212ENST00000590096 RBMY1BA6NDE4 496 aaKnown RBP15.82■□□□□ 0.12
ATG4D-212ENST00000590096 RBMY1EA6NEQ0 496 aaKnown RBP15.82■□□□□ 0.12
ATG4D-212ENST00000590096 IFNA5P01569 189 aa15.82■□□□□ 0.12
ATG4D-212ENST00000590096 RBMY1DP0C7P1 496 aaKnown RBP15.82■□□□□ 0.12
ATG4D-212ENST00000590096 DEFB131AP59861 70 aa15.82■□□□□ 0.12
ATG4D-212ENST00000590096 SNRPD3P62318 126 aaKnown RBP15.82■□□□□ 0.12
ATG4D-212ENST00000590096 PRR20EP86478 221 aa15.82■□□□□ 0.12
ATG4D-212ENST00000590096 PRR20CP86479 221 aa15.82■□□□□ 0.12
ATG4D-212ENST00000590096 PRR20DP86480 221 aa15.82■□□□□ 0.12
ATG4D-212ENST00000590096 PRR20BP86481 221 aa15.82■□□□□ 0.12
ATG4D-212ENST00000590096 PRR20AP86496 221 aa15.82■□□□□ 0.12
ATG4D-212ENST00000590096 C10orf113Q5VZT2 155 aa15.82■□□□□ 0.12
ATG4D-212ENST00000590096 LEMD1Q68G75 181 aa15.82■□□□□ 0.12
ATG4D-212ENST00000590096 PATE2Q6UY27 113 aa15.82■□□□□ 0.12
ATG4D-212ENST00000590096 ZNF709Q8N972 641 aa15.82■□□□□ 0.12
ATG4D-212ENST00000590096 CITED4Q96RK1 184 aa15.82■□□□□ 0.12
ATG4D-212ENST00000590096 WDR61Q9GZS3 305 aaKnown RBP15.82■□□□□ 0.12
ATG4D-212ENST00000590096 SLC39A9Q9NUM3 307 aa15.82■□□□□ 0.12
ATG4D-212ENST00000590096 PXMP4Q9Y6I8 212 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms