RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 RHPN1-AS1Q9BWJ2 59 aa7.78□□□□□ -1.16
SDF2-208ENST00000589788 IGHV3OR16-13A0A075B7E8 117 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 IGHV3-74A0A0B4J1X5 117 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 RNF222A6NCQ9 220 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 H3BP45 60 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 BOLA2-SMG1P6H3BVE0 249 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 CHEK1O14757 476 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 TSPAN4O14817 238 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 ARPC5O15511 151 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 IGKV1-17P01599 117 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 HNRNPCP07910 306 aaKnown RBP eCLIP7.77□□□□□ -1.17
SDF2-208ENST00000589788 MALP21145 153 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 OR10J1P30954 320 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 NUP62P37198 522 aaPredicted RBP7.77□□□□□ -1.17
SDF2-208ENST00000589788 CAV2P51636 162 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 ZNF345Q14585 488 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 SPANXN5Q5MJ07 72 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 TMEM14EPQ6UXP3 125 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 DEFB125Q8N687 156 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 INO80EQ8NBZ0 244 aaPredicted RBP7.77□□□□□ -1.17
SDF2-208ENST00000589788 OR1S2Q8NGQ3 325 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 Q8WTZ3 238 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 NPIPB3Q92617 1050 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 NARS2Q96I59 477 aaKnown RBP7.77□□□□□ -1.17
SDF2-208ENST00000589788 ZNF414Q96IQ9 312 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 METTL26Q96S19 204 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 RNF2Q99496 336 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 SLC25A31Q9H0C2 315 aa7.77□□□□□ -1.17
SDF2-208ENST00000589788 STRAPQ9Y3F4 350 aaKnown RBP7.77□□□□□ -1.17
SDF2-208ENST00000589788 IGSF23A1L1A6 192 aa7.76□□□□□ -1.17
SDF2-208ENST00000589788 FAM24AA6NFZ4 105 aa7.76□□□□□ -1.17
SDF2-208ENST00000589788 OR4C46A6NHA9 309 aa7.76□□□□□ -1.17
SDF2-208ENST00000589788 CD5P06127 495 aa7.76□□□□□ -1.17
SDF2-208ENST00000589788 IGLC1P0CG04 106 aa7.76□□□□□ -1.17
SDF2-208ENST00000589788 NPPCP23582 126 aa7.76□□□□□ -1.17
SDF2-208ENST00000589788 RPL12P30050 165 aaKnown RBP7.76□□□□□ -1.17
SDF2-208ENST00000589788 GPX4P36969 197 aaPredicted RBP7.76□□□□□ -1.17
SDF2-208ENST00000589788 SULT1A1P50225 295 aa7.76□□□□□ -1.17
SDF2-208ENST00000589788 YPEL3P61236 119 aaPredicted RBP7.76□□□□□ -1.17
SDF2-208ENST00000589788 EWSR1Q01844 656 aaKnown RBP eCLIP7.76□□□□□ -1.17
SDF2-208ENST00000589788 BAXQ07812 192 aa7.76□□□□□ -1.17
SDF2-208ENST00000589788 ACOT7LQ6ZUV0 252 aa7.76□□□□□ -1.17
SDF2-208ENST00000589788 STX12Q86Y82 276 aa7.76□□□□□ -1.17
SDF2-208ENST00000589788 TMEM252Q8N6L7 170 aa7.76□□□□□ -1.17
SDF2-208ENST00000589788 SLC35E1Q96K37 410 aa7.76□□□□□ -1.17
SDF2-208ENST00000589788 KRTAP9-2Q9BYQ4 174 aa7.76□□□□□ -1.17
SDF2-208ENST00000589788 WFDC10AQ9H1F0 79 aa7.76□□□□□ -1.17
SDF2-208ENST00000589788 TMEM231Q9H6L2 316 aa7.76□□□□□ -1.17
SDF2-208ENST00000589788 SRD5A3Q9H8P0 318 aa7.76□□□□□ -1.17
SDF2-208ENST00000589788 DNAH3Q8TD57 4116 aa7.75□□□□□ -1.17
SDF2-208ENST00000589788 A0A0D9SG52 128 aa7.75□□□□□ -1.17
SDF2-208ENST00000589788 A0A1W2PS18 150 aa7.75□□□□□ -1.17
SDF2-208ENST00000589788 PMS2P5A8MQ11 134 aa7.75□□□□□ -1.17
SDF2-208ENST00000589788 METTL15P1P0C7V9 234 aa7.75□□□□□ -1.17
SDF2-208ENST00000589788 EIF2B2P49770 351 aaKnown RBP7.75□□□□□ -1.17
SDF2-208ENST00000589788 PAFAH1B2P68402 229 aa7.75□□□□□ -1.17
SDF2-208ENST00000589788 OR2F1Q13607 317 aa7.75□□□□□ -1.17
SDF2-208ENST00000589788 TCF24Q7RTU0 167 aa7.75□□□□□ -1.17
SDF2-208ENST00000589788 C9orf62Q8N4C0 152 aa7.75□□□□□ -1.17
SDF2-208ENST00000589788 ST8SIA2Q92186 375 aa7.75□□□□□ -1.17
SDF2-208ENST00000589788 GRAMD2BQ96HH9 432 aa7.75□□□□□ -1.17
SDF2-208ENST00000589788 RCHY1Q96PM5 261 aa7.75□□□□□ -1.17
SDF2-208ENST00000589788 MFFQ9GZY8 342 aa7.75□□□□□ -1.17
SDF2-208ENST00000589788 HSPB11Q9Y547 144 aa7.75□□□□□ -1.17
SDF2-208ENST00000589788 IGKV3-7A0A075B6H7 116 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 IGHV3-66A0A0C4DH42 116 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 ZFP92A6NM28 416 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 PRSS46E5RG02 174 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 APOHP02749 345 aaPredicted RBP7.74□□□□□ -1.17
SDF2-208ENST00000589788 FABP1P07148 127 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 RD3LP0DJH9 198 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 CXCL2P19875 107 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 TFPI2P48307 235 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 NKX2-5P52952 324 aaPredicted RBP7.74□□□□□ -1.17
SDF2-208ENST00000589788 HBG1P69891 147 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 HBG2P69892 147 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 GAMTQ14353 236 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 HAGHQ16775 308 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 LGALSLQ3ZCW2 172 aaPredicted RBP7.74□□□□□ -1.17
SDF2-208ENST00000589788 GBGT1Q8N5D6 347 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 KCNRGQ8N5I3 272 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 WWC2-AS2Q96NR7 200 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 TM2D3Q9BRN9 247 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 VSIRQ9H7M9 311 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 UBQLN2Q9UHD9 624 aa7.74□□□□□ -1.17
SDF2-208ENST00000589788 COL7A1Q02388 2944 aa7.73□□□□□ -1.17
SDF2-208ENST00000589788 KRTAP9-6A0A140TA67 174 aa7.73□□□□□ -1.17
SDF2-208ENST00000589788 RBMY1BA6NDE4 496 aaKnown RBP7.73□□□□□ -1.17
SDF2-208ENST00000589788 RBMY1EA6NEQ0 496 aaKnown RBP7.73□□□□□ -1.17
SDF2-208ENST00000589788 DNASE2O00115 360 aaPredicted RBP7.73□□□□□ -1.17
SDF2-208ENST00000589788 DFFBO76075 338 aa7.73□□□□□ -1.17
SDF2-208ENST00000589788 CST7O76096 145 aa7.73□□□□□ -1.17
SDF2-208ENST00000589788 TOMM40O96008 361 aa7.73□□□□□ -1.17
SDF2-208ENST00000589788 IL4P05112 153 aa7.73□□□□□ -1.17
SDF2-208ENST00000589788 RBMY1DP0C7P1 496 aaKnown RBP7.73□□□□□ -1.17
SDF2-208ENST00000589788 CRYBB3P26998 211 aa7.73□□□□□ -1.17
SDF2-208ENST00000589788 S100A11P31949 105 aa7.73□□□□□ -1.17
SDF2-208ENST00000589788 AP2S1P53680 142 aaPredicted RBP7.73□□□□□ -1.17
SDF2-208ENST00000589788 CMC4P56277 68 aaPredicted RBP7.73□□□□□ -1.17
SDF2-208ENST00000589788 NHLH2Q02577 135 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms