RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 GNPNAT1Q96EK6 184 aaPredicted RBP9.24□□□□□ -0.93
DNMT1-218ENST00000589294 PBDC1Q9BVG4 233 aa9.24□□□□□ -0.93
DNMT1-218ENST00000589294 ARL6Q9H0F7 186 aa9.24□□□□□ -0.93
DNMT1-218ENST00000589294 TMEM231Q9H6L2 316 aa9.24□□□□□ -0.93
DNMT1-218ENST00000589294 DNAJC4Q9NNZ3 241 aa9.24□□□□□ -0.93
DNMT1-218ENST00000589294 CYTL1Q9NRR1 136 aa9.24□□□□□ -0.93
DNMT1-218ENST00000589294 SLC39A9Q9NUM3 307 aa9.24□□□□□ -0.93
DNMT1-218ENST00000589294 PXMP4Q9Y6I8 212 aa9.24□□□□□ -0.93
DNMT1-218ENST00000589294 CHEK1O14757 476 aa9.23□□□□□ -0.93
DNMT1-218ENST00000589294 BCL2L11O43521 198 aa9.23□□□□□ -0.93
DNMT1-218ENST00000589294 SAP30O75446 220 aa9.23□□□□□ -0.93
DNMT1-218ENST00000589294 CD5P06127 495 aa9.23□□□□□ -0.93
DNMT1-218ENST00000589294 C4BPBP20851 252 aa9.23□□□□□ -0.93
DNMT1-218ENST00000589294 B2MP61769 119 aa9.23□□□□□ -0.93
DNMT1-218ENST00000589294 EIF5AP63241 154 aaKnown RBP9.23□□□□□ -0.93
DNMT1-218ENST00000589294 C1orf194Q5T5A4 169 aa9.23□□□□□ -0.93
DNMT1-218ENST00000589294 MIC13Q5XKP0 118 aa9.23□□□□□ -0.93
DNMT1-218ENST00000589294 ADAMTSL5Q6ZMM2 481 aa9.23□□□□□ -0.93
DNMT1-218ENST00000589294 OR1L4Q8NGR5 311 aa9.23□□□□□ -0.93
DNMT1-218ENST00000589294 OR1B1Q8NGR6 318 aa9.23□□□□□ -0.93
DNMT1-218ENST00000589294 PSMG3Q9BT73 122 aaPredicted RBP9.23□□□□□ -0.93
DNMT1-218ENST00000589294 RHPN1-AS1Q9BWJ2 59 aa9.23□□□□□ -0.93
DNMT1-218ENST00000589294 ARV1Q9H2C2 271 aa9.23□□□□□ -0.93
DNMT1-218ENST00000589294 VSIRQ9H7M9 311 aa9.23□□□□□ -0.93
DNMT1-218ENST00000589294 RNF24Q9Y225 148 aa9.23□□□□□ -0.93
DNMT1-218ENST00000589294 BUB3O43684 328 aa9.22□□□□□ -0.93
DNMT1-218ENST00000589294 IGLV1-51P01701 117 aa9.22□□□□□ -0.93
DNMT1-218ENST00000589294 IGLL1P15814 213 aa9.22□□□□□ -0.93
DNMT1-218ENST00000589294 SERF2P84101 59 aa9.22□□□□□ -0.93
DNMT1-218ENST00000589294 DEFB114Q30KQ6 69 aa9.22□□□□□ -0.93
DNMT1-218ENST00000589294 PATE2Q6UY27 113 aa9.22□□□□□ -0.93
DNMT1-218ENST00000589294 OR2K2Q8NGT1 345 aa9.22□□□□□ -0.93
DNMT1-218ENST00000589294 GATAD1Q8WUU5 269 aa9.22□□□□□ -0.93
DNMT1-218ENST00000589294 GRAMD2BQ96HH9 432 aa9.22□□□□□ -0.93
DNMT1-218ENST00000589294 PFDN5Q99471 154 aa9.22□□□□□ -0.93
DNMT1-218ENST00000589294 RSG1Q9BU20 258 aa9.22□□□□□ -0.93
DNMT1-218ENST00000589294 ZMAT5Q9UDW3 170 aaKnown RBP9.22□□□□□ -0.93
DNMT1-218ENST00000589294 HIGD1AQ9Y241 93 aa9.22□□□□□ -0.93
DNMT1-218ENST00000589294 COX7A2P2O60397 106 aa9.21□□□□□ -0.94
DNMT1-218ENST00000589294 APOHP02749 345 aaPredicted RBP9.21□□□□□ -0.94
DNMT1-218ENST00000589294 OR5G3P0C626 314 aa9.21□□□□□ -0.94
DNMT1-218ENST00000589294 ATP6V0CP27449 155 aa9.21□□□□□ -0.94
DNMT1-218ENST00000589294 C10orf113Q5VZT2 155 aa9.21□□□□□ -0.94
DNMT1-218ENST00000589294 LAMTOR1Q6IAA8 161 aa9.21□□□□□ -0.94
DNMT1-218ENST00000589294 C9orf62Q8N4C0 152 aa9.21□□□□□ -0.94
DNMT1-218ENST00000589294 HSD17B11Q8NBQ5 300 aa9.21□□□□□ -0.94
DNMT1-218ENST00000589294 OR2G3Q8NGZ4 309 aa9.21□□□□□ -0.94
DNMT1-218ENST00000589294 TMEM37Q8WXS4 190 aa9.21□□□□□ -0.94
DNMT1-218ENST00000589294 NBEAL1Q6ZS30 2694 aa9.21□□□□□ -0.94
DNMT1-218ENST00000589294 IGHV3-49A0A0A0MS15 119 aa9.2□□□□□ -0.94
DNMT1-218ENST00000589294 TRAV25A0A0B4J276 109 aa9.2□□□□□ -0.94
DNMT1-218ENST00000589294 ZNF98A6NK75 572 aa9.2□□□□□ -0.94
DNMT1-218ENST00000589294 MBP02144 154 aa9.2□□□□□ -0.94
DNMT1-218ENST00000589294 EDN2P20800 178 aa9.2□□□□□ -0.94
DNMT1-218ENST00000589294 FFAR4Q5NUL3 377 aa9.2□□□□□ -0.94
DNMT1-218ENST00000589294 C16orf54Q6UWD8 224 aa9.2□□□□□ -0.94
DNMT1-218ENST00000589294 DYNLRB2Q8TF09 96 aa9.2□□□□□ -0.94
DNMT1-218ENST00000589294 ST8SIA2Q92186 375 aa9.2□□□□□ -0.94
DNMT1-218ENST00000589294 PPP1R14BQ96C90 147 aa9.2□□□□□ -0.94
DNMT1-218ENST00000589294 RNF2Q99496 336 aa9.2□□□□□ -0.94
DNMT1-218ENST00000589294 SHANK2-AS3Q9BTD1 123 aa9.2□□□□□ -0.94
DNMT1-218ENST00000589294 ZNF471Q9BX82 626 aaPredicted RBP9.2□□□□□ -0.94
DNMT1-218ENST00000589294 SLC25A39Q9BZJ4 359 aaPredicted RBP9.2□□□□□ -0.94
DNMT1-218ENST00000589294 DOK5Q9P104 306 aa9.2□□□□□ -0.94
DNMT1-218ENST00000589294 MLXQ9UH92 298 aa9.2□□□□□ -0.94
DNMT1-218ENST00000589294 IGHV3OR16-13A0A075B7E8 117 aa9.19□□□□□ -0.94
DNMT1-218ENST00000589294 IGHV3-74A0A0B4J1X5 117 aa9.19□□□□□ -0.94
DNMT1-218ENST00000589294 HELTA6NFD8 242 aa9.19□□□□□ -0.94
DNMT1-218ENST00000589294 SPP1P10451 314 aa9.19□□□□□ -0.94
DNMT1-218ENST00000589294 ACOT6Q3I5F7 207 aaPredicted RBP9.19□□□□□ -0.94
DNMT1-218ENST00000589294 CD300EQ496F6 205 aaPredicted RBP9.19□□□□□ -0.94
DNMT1-218ENST00000589294 OXLD1Q5BKU9 147 aa9.19□□□□□ -0.94
DNMT1-218ENST00000589294 FAM90A2PQ658T7 463 aa9.19□□□□□ -0.94
DNMT1-218ENST00000589294 RBPMS2Q6ZRY4 209 aaKnown RBP9.19□□□□□ -0.94
DNMT1-218ENST00000589294 LINC00305Q7Z4B0 112 aa9.19□□□□□ -0.94
DNMT1-218ENST00000589294 SLC51BQ86UW2 128 aa9.19□□□□□ -0.94
DNMT1-218ENST00000589294 BAP18Q8IXM2 172 aa9.19□□□□□ -0.94
DNMT1-218ENST00000589294 OR8I2Q8N0Y5 310 aa9.19□□□□□ -0.94
DNMT1-218ENST00000589294 STOML3Q8TAV4 291 aa9.19□□□□□ -0.94
DNMT1-218ENST00000589294 GPR82Q96P67 336 aa9.19□□□□□ -0.94
DNMT1-218ENST00000589294 IGHV3-66A0A0C4DH42 116 aa9.18□□□□□ -0.94
DNMT1-218ENST00000589294 H3BRN7 92 aa9.18□□□□□ -0.94
DNMT1-218ENST00000589294 TSPAN4O14817 238 aa9.18□□□□□ -0.94
DNMT1-218ENST00000589294 SEC11BP0C7V7 166 aa9.18□□□□□ -0.94
DNMT1-218ENST00000589294 TPT1P13693 172 aaKnown RBP9.18□□□□□ -0.94
DNMT1-218ENST00000589294 M6PRP20645 277 aa9.18□□□□□ -0.94
DNMT1-218ENST00000589294 SAMD5Q5TGI4 173 aa9.18□□□□□ -0.94
DNMT1-218ENST00000589294 EIF5AL1Q6IS14 154 aaKnown RBP9.18□□□□□ -0.94
DNMT1-218ENST00000589294 LCN12Q6JVE5 192 aa9.18□□□□□ -0.94
DNMT1-218ENST00000589294 GLMPQ8WWB7 406 aa9.18□□□□□ -0.94
DNMT1-218ENST00000589294 SLC25A32Q9H2D1 315 aa9.18□□□□□ -0.94
DNMT1-218ENST00000589294 NOTCH1P46531 2555 aa9.17□□□□□ -0.94
DNMT1-218ENST00000589294 RPL7P18124 248 aaKnown RBP9.17□□□□□ -0.94
DNMT1-218ENST00000589294 NKX2-5P52952 324 aaPredicted RBP9.17□□□□□ -0.94
DNMT1-218ENST00000589294 RHOBP62745 196 aa9.17□□□□□ -0.94
DNMT1-218ENST00000589294 PAFAH1B2P68402 229 aa9.17□□□□□ -0.94
DNMT1-218ENST00000589294 EGFEM1PQ0D2K5 195 aa9.17□□□□□ -0.94
DNMT1-218ENST00000589294 GCSAMLQ5JQS6 135 aa9.17□□□□□ -0.94
DNMT1-218ENST00000589294 FAM78BQ5VT40 261 aa9.17□□□□□ -0.94
DNMT1-218ENST00000589294 TCF24Q7RTU0 167 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms