RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 CDC34P49427 236 aaPredicted RBP11.14□□□□□ -0.63
NPC1-207ENST00000588867 NSUN5P1Q3KNT7 163 aa11.14□□□□□ -0.63
NPC1-207ENST00000588867 DPPA3Q6W0C5 159 aa11.14□□□□□ -0.63
NPC1-207ENST00000588867 LINC00305Q7Z4B0 112 aa11.14□□□□□ -0.63
NPC1-207ENST00000588867 OR1N2Q8NGR9 330 aa11.14□□□□□ -0.63
NPC1-207ENST00000588867 RAB24Q969Q5 203 aa11.14□□□□□ -0.63
NPC1-207ENST00000588867 C19orf24Q9BVV8 132 aa11.14□□□□□ -0.63
NPC1-207ENST00000588867 ZFAND3Q9H8U3 227 aa11.14□□□□□ -0.63
NPC1-207ENST00000588867 ZNF207O43670 478 aaKnown RBP11.13□□□□□ -0.63
NPC1-207ENST00000588867 H2AFB1P0C5Y9 115 aa11.13□□□□□ -0.63
NPC1-207ENST00000588867 BLOC1S1P78537 153 aa11.13□□□□□ -0.63
NPC1-207ENST00000588867 ZNF726P1Q15940 193 aa11.13□□□□□ -0.63
NPC1-207ENST00000588867 FAM106AQ4KMX7 169 aa11.13□□□□□ -0.63
NPC1-207ENST00000588867 SPATA31B1PQ5VZV4 182 aa11.13□□□□□ -0.63
NPC1-207ENST00000588867 LCN15Q6UWW0 184 aa11.13□□□□□ -0.63
NPC1-207ENST00000588867 UNQ9165/PRO28630Q6UXU0 137 aa11.13□□□□□ -0.63
NPC1-207ENST00000588867 SSX7Q7RTT5 188 aa11.13□□□□□ -0.63
NPC1-207ENST00000588867 SFT2D1Q8WV19 159 aa11.13□□□□□ -0.63
NPC1-207ENST00000588867 MRPL27Q9P0M9 148 aaKnown RBP11.13□□□□□ -0.63
NPC1-207ENST00000588867 LINC01619G3V211 115 aa11.13□□□□□ -0.63
NPC1-207ENST00000588867 MIR17HGQ75NE6 70 aa11.13□□□□□ -0.63
NPC1-207ENST00000588867 SAT2Q96F10 170 aaPredicted RBP11.13□□□□□ -0.63
NPC1-207ENST00000588867 RABAC1Q9UI14 185 aa11.13□□□□□ -0.63
NPC1-207ENST00000588867 FUT9Q9Y231 359 aa11.13□□□□□ -0.63
NPC1-207ENST00000588867 TRAV5A0A0B4J249 113 aa11.12□□□□□ -0.63
NPC1-207ENST00000588867 CTXND1A0A1B0GTU2 59 aa11.12□□□□□ -0.63
NPC1-207ENST00000588867 NMBP08949 121 aa11.12□□□□□ -0.63
NPC1-207ENST00000588867 HOXD3P31249 432 aaPredicted RBP11.12□□□□□ -0.63
NPC1-207ENST00000588867 MORN5Q5VZ52 161 aa11.12□□□□□ -0.63
NPC1-207ENST00000588867 GPHB5Q86YW7 130 aa11.12□□□□□ -0.63
NPC1-207ENST00000588867 RNF2Q99496 336 aa11.12□□□□□ -0.63
NPC1-207ENST00000588867 SLC25A39Q9BZJ4 359 aaPredicted RBP11.12□□□□□ -0.63
NPC1-207ENST00000588867 HRH4Q9H3N8 390 aa11.12□□□□□ -0.63
NPC1-207ENST00000588867 SEC14L6B5MCN3 397 aa11.11□□□□□ -0.63
NPC1-207ENST00000588867 ZP3P21754 424 aa11.11□□□□□ -0.63
NPC1-207ENST00000588867 SLURP1P55000 103 aa11.11□□□□□ -0.63
NPC1-207ENST00000588867 FGF8P55075 233 aaPredicted RBP11.11□□□□□ -0.63
NPC1-207ENST00000588867 LEMD1Q68G75 181 aa11.11□□□□□ -0.63
NPC1-207ENST00000588867 MAP1LC3B2A6NCE7 125 aa11.11□□□□□ -0.63
NPC1-207ENST00000588867 SYNJ2BPP57105 145 aa11.11□□□□□ -0.63
NPC1-207ENST00000588867 RAX2Q96IS3 184 aa11.11□□□□□ -0.63
NPC1-207ENST00000588867 METTL26Q96S19 204 aa11.11□□□□□ -0.63
NPC1-207ENST00000588867 MRPL32Q9BYC8 188 aaKnown RBP11.11□□□□□ -0.63
NPC1-207ENST00000588867 MAP1LC3BQ9GZQ8 125 aa11.11□□□□□ -0.63
NPC1-207ENST00000588867 IGHV3OR16-13A0A075B7E8 117 aa11.1□□□□□ -0.63
NPC1-207ENST00000588867 IGHV3-49A0A0A0MS15 119 aa11.1□□□□□ -0.63
NPC1-207ENST00000588867 IGHV3-74A0A0B4J1X5 117 aa11.1□□□□□ -0.63
NPC1-207ENST00000588867 NPPCP23582 126 aa11.1□□□□□ -0.63
NPC1-207ENST00000588867 CLLU1Q5K131 121 aa11.1□□□□□ -0.63
NPC1-207ENST00000588867 S100A7AQ86SG5 101 aa11.1□□□□□ -0.63
NPC1-207ENST00000588867 IQCF2Q8IXL9 164 aa11.1□□□□□ -0.63
NPC1-207ENST00000588867 TMEM190Q8WZ59 177 aa11.1□□□□□ -0.63
NPC1-207ENST00000588867 SCRT1Q9BWW7 348 aa11.1□□□□□ -0.63
NPC1-207ENST00000588867 TECRQ9NZ01 308 aaKnown RBP11.1□□□□□ -0.63
NPC1-207ENST00000588867 ADARB2-AS1A8MUL3 147 aa11.09□□□□□ -0.63
NPC1-207ENST00000588867 CCL24O00175 119 aa11.09□□□□□ -0.63
NPC1-207ENST00000588867 C8orf88P0DMB2 117 aa11.09□□□□□ -0.63
NPC1-207ENST00000588867 TM4SF20Q53R12 229 aa11.09□□□□□ -0.63
NPC1-207ENST00000588867 NDUFA11Q86Y39 141 aa11.09□□□□□ -0.63
NPC1-207ENST00000588867 MBD3L1Q8WWY6 194 aa11.09□□□□□ -0.63
NPC1-207ENST00000588867 SHANK2-AS3Q9BTD1 123 aa11.09□□□□□ -0.63
NPC1-207ENST00000588867 ATRQ13535 2644 aa11.09□□□□□ -0.63
NPC1-207ENST00000588867 IGHV3-66A0A0C4DH42 116 aa11.09□□□□□ -0.63
NPC1-207ENST00000588867 ZNF98A6NK75 572 aa11.09□□□□□ -0.63
NPC1-207ENST00000588867 TEX46H3BTG2 121 aa11.09□□□□□ -0.63
NPC1-207ENST00000588867 STAG3L2P0CL84 134 aa11.09□□□□□ -0.63
NPC1-207ENST00000588867 STAG3L3P0CL85 134 aa11.09□□□□□ -0.63
NPC1-207ENST00000588867 TAS2R45P59539 299 aa11.09□□□□□ -0.63
NPC1-207ENST00000588867 KLF5Q13887 457 aaPredicted RBP11.09□□□□□ -0.63
NPC1-207ENST00000588867 TMEM158Q8WZ71 300 aa11.09□□□□□ -0.63
NPC1-207ENST00000588867 H3BRN7 92 aa11.08□□□□□ -0.64
NPC1-207ENST00000588867 OR7C2O60412 319 aa11.08□□□□□ -0.64
NPC1-207ENST00000588867 APOHP02749 345 aaPredicted RBP11.08□□□□□ -0.64
NPC1-207ENST00000588867 ARL14EPLP0DKL9 152 aa11.08□□□□□ -0.64
NPC1-207ENST00000588867 S100A1P23297 94 aa11.08□□□□□ -0.64
NPC1-207ENST00000588867 S100A7P31151 101 aa11.08□□□□□ -0.64
NPC1-207ENST00000588867 C1QL4Q86Z23 238 aa11.08□□□□□ -0.64
NPC1-207ENST00000588867 SLC25A2Q9BXI2 301 aa11.08□□□□□ -0.64
NPC1-207ENST00000588867 PFDN2Q9UHV9 154 aa11.08□□□□□ -0.64
NPC1-207ENST00000588867 UFC1Q9Y3C8 167 aa11.08□□□□□ -0.64
NPC1-207ENST00000588867 HBE1P02100 147 aa11.08□□□□□ -0.64
NPC1-207ENST00000588867 CRYBB3P26998 211 aa11.08□□□□□ -0.64
NPC1-207ENST00000588867 CCL20P78556 96 aa11.08□□□□□ -0.64
NPC1-207ENST00000588867 KHDC3LQ587J8 217 aa11.08□□□□□ -0.64
NPC1-207ENST00000588867 DLX4Q92988 240 aaPredicted RBP11.08□□□□□ -0.64
NPC1-207ENST00000588867 TMPRSS5Q9H3S3 457 aa11.08□□□□□ -0.64
NPC1-207ENST00000588867 DAZ1Q9NQZ3 744 aaKnown RBP11.08□□□□□ -0.64
NPC1-207ENST00000588867 LGALS9O00182 355 aa11.07□□□□□ -0.64
NPC1-207ENST00000588867 CXorf1O96002 111 aa11.07□□□□□ -0.64
NPC1-207ENST00000588867 SNRPCP09234 159 aaKnown RBP11.07□□□□□ -0.64
NPC1-207ENST00000588867 OR10J4P0C629 311 aa11.07□□□□□ -0.64
NPC1-207ENST00000588867 IL34Q6ZMJ4 242 aa11.07□□□□□ -0.64
NPC1-207ENST00000588867 NARS2Q96I59 477 aaKnown RBP11.07□□□□□ -0.64
NPC1-207ENST00000588867 FAM167A-AS1Q96KT0 104 aa11.07□□□□□ -0.64
NPC1-207ENST00000588867 CITED1Q99966 193 aa11.07□□□□□ -0.64
NPC1-207ENST00000588867 K7EMT4 169 aa11.06□□□□□ -0.64
NPC1-207ENST00000588867 BUB3O43684 328 aa11.06□□□□□ -0.64
NPC1-207ENST00000588867 REC114Q7Z4M0 266 aa11.06□□□□□ -0.64
NPC1-207ENST00000588867 OR8I2Q8N0Y5 310 aa11.06□□□□□ -0.64
NPC1-207ENST00000588867 OR51M1Q9H341 326 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms