RNA–Protein interactions for RNA: ENST00000586407.1

LIG3-208, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-208ENST00000586407 OR8I2Q8N0Y5 310 aa20.46■□□□□ 0.87
LIG3-208ENST00000586407 BPIFCQ8NFQ6 507 aa20.46■□□□□ 0.87
LIG3-208ENST00000586407 LINC00052Q96N35 136 aa20.46■□□□□ 0.87
LIG3-208ENST00000586407 SLC25A22Q9H936 323 aa20.46■□□□□ 0.87
LIG3-208ENST00000586407 DOK5Q9P104 306 aa20.46■□□□□ 0.87
LIG3-208ENST00000586407 FAM25EA8MYX2 175 aa20.45■□□□□ 0.86
LIG3-208ENST00000586407 SPP1P10451 314 aa20.45■□□□□ 0.86
LIG3-208ENST00000586407 GDF5OSQ5U4N7 250 aa20.45■□□□□ 0.86
LIG3-208ENST00000586407 MORN3Q6PF18 240 aaPredicted RBP20.45■□□□□ 0.86
LIG3-208ENST00000586407 TMEM144Q7Z5S9 345 aa20.45■□□□□ 0.86
LIG3-208ENST00000586407 TMEM217Q8N7C4 229 aa20.45■□□□□ 0.86
LIG3-208ENST00000586407 OR1B1Q8NGR6 318 aa20.45■□□□□ 0.86
LIG3-208ENST00000586407 ZNF431Q8TF32 576 aaPredicted RBP20.45■□□□□ 0.86
LIG3-208ENST00000586407 SLC25A32Q9H2D1 315 aa20.45■□□□□ 0.86
LIG3-208ENST00000586407 FBXL17Q9UF56 701 aa20.45■□□□□ 0.86
LIG3-208ENST00000586407 A6NHS1 94 aa20.44■□□□□ 0.86
LIG3-208ENST00000586407 SOCS3O14543 225 aa20.44■□□□□ 0.86
LIG3-208ENST00000586407 H2AFB2P0C5Z0 115 aa20.44■□□□□ 0.86
LIG3-208ENST00000586407 NANOS2P60321 138 aaKnown RBP20.44■□□□□ 0.86
LIG3-208ENST00000586407 C1orf194Q5T5A4 169 aa20.44■□□□□ 0.86
LIG3-208ENST00000586407 ARL16Q0P5N6 197 aa20.43■□□□□ 0.86
LIG3-208ENST00000586407 CYP2G1PQ6ZSU1 146 aa20.43■□□□□ 0.86
LIG3-208ENST00000586407 C11orf68Q9H3H3 251 aaKnown RBP20.43■□□□□ 0.86
LIG3-208ENST00000586407 SEPSECSQ9HD40 501 aaKnown RBP20.43■□□□□ 0.86
LIG3-208ENST00000586407 FAM240BA0A1B0GVZ2 78 aa20.42■□□□□ 0.86
LIG3-208ENST00000586407 H3BMM0 161 aa20.42■□□□□ 0.86
LIG3-208ENST00000586407 IGKV3-20P01619 116 aa20.42■□□□□ 0.86
LIG3-208ENST00000586407 ATF4P18848 351 aaPredicted RBP20.42■□□□□ 0.86
LIG3-208ENST00000586407 DLK1P80370 383 aa20.42■□□□□ 0.86
LIG3-208ENST00000586407 CEMP1Q6PRD7 247 aaPredicted RBP20.42■□□□□ 0.86
LIG3-208ENST00000586407 SCRT1Q9BWW7 348 aa20.42■□□□□ 0.86
LIG3-208ENST00000586407 LSM5Q9Y4Y9 91 aaKnown RBP20.42■□□□□ 0.86
LIG3-208ENST00000586407 C7orf66A4D0T2 115 aa20.41■□□□□ 0.86
LIG3-208ENST00000586407 NUPR2A6NF83 97 aa20.41■□□□□ 0.86
LIG3-208ENST00000586407 ZNF98A6NK75 572 aa20.41■□□□□ 0.86
LIG3-208ENST00000586407 CFDP00746 253 aaPredicted RBP20.41■□□□□ 0.86
LIG3-208ENST00000586407 IL5P05113 134 aa20.41■□□□□ 0.86
LIG3-208ENST00000586407 ZNF846Q147U1 533 aa20.41■□□□□ 0.86
LIG3-208ENST00000586407 C12orf45Q8N5I9 185 aaPredicted RBP20.41■□□□□ 0.86
LIG3-208ENST00000586407 Q8NAQ8 132 aa20.41■□□□□ 0.86
LIG3-208ENST00000586407 S100ZQ8WXG8 99 aa20.41■□□□□ 0.86
LIG3-208ENST00000586407 C17orf77Q96MU5 243 aa20.41■□□□□ 0.86
LIG3-208ENST00000586407 TMEM147Q9BVK8 224 aa20.41■□□□□ 0.86
LIG3-208ENST00000586407 ALMS1Q8TCU4 4167 aa20.41■□□□□ 0.86
LIG3-208ENST00000586407 IGHV4-28A0A0C4DH34 117 aa20.4■□□□□ 0.86
LIG3-208ENST00000586407 C5orf51A6NDU8 294 aa20.4■□□□□ 0.86
LIG3-208ENST00000586407 TSC22D2O75157 780 aa20.4■□□□□ 0.86
LIG3-208ENST00000586407 HLA-DRB4P13762 266 aa20.4■□□□□ 0.86
LIG3-208ENST00000586407 FXYD7P58549 80 aa20.4■□□□□ 0.86
LIG3-208ENST00000586407 CSNK1G2-AS1Q8NCQ2 148 aa20.4■□□□□ 0.86
LIG3-208ENST00000586407 XCL2Q9UBD3 114 aa20.4■□□□□ 0.86
LIG3-208ENST00000586407 HLA-DRB4X5D2U9 266 aa20.4■□□□□ 0.86
LIG3-208ENST00000586407 X6R8D5 127 aa20.4■□□□□ 0.86
LIG3-208ENST00000586407 RBMY1A1P0DJD3 496 aaKnown RBP20.39■□□□□ 0.85
LIG3-208ENST00000586407 RBMY1CP0DJD4 496 aa20.39■□□□□ 0.85
LIG3-208ENST00000586407 ID1P41134 155 aa20.39■□□□□ 0.85
LIG3-208ENST00000586407 PSMB3P49720 205 aa20.39■□□□□ 0.85
LIG3-208ENST00000586407 TAS2R30P59541 319 aa20.39■□□□□ 0.85
LIG3-208ENST00000586407 RBMY1FQ15415 496 aaKnown RBP20.39■□□□□ 0.85
LIG3-208ENST00000586407 LINC00299Q6ZSB3 139 aa20.39■□□□□ 0.85
LIG3-208ENST00000586407 OR10P1Q8NGE3 313 aa20.39■□□□□ 0.85
LIG3-208ENST00000586407 C11orf45Q8TAV5 145 aa20.39■□□□□ 0.85
LIG3-208ENST00000586407 PHLDA1Q8WV24 401 aaPredicted RBP20.39■□□□□ 0.85
LIG3-208ENST00000586407 C20orf173Q96LM9 149 aa20.39■□□□□ 0.85
LIG3-208ENST00000586407 RSG1Q9BU20 258 aa20.39■□□□□ 0.85
LIG3-208ENST00000586407 DNAH1Q9P2D7 4330 aa20.38■□□□□ 0.85
LIG3-208ENST00000586407 F6UB75 175 aa20.38■□□□□ 0.85
LIG3-208ENST00000586407 LINC00869P0C866 280 aa20.38■□□□□ 0.85
LIG3-208ENST00000586407 SLC38A11Q08AI6 406 aa20.38■□□□□ 0.85
LIG3-208ENST00000586407 ASAH1Q13510 395 aa20.38■□□□□ 0.85
LIG3-208ENST00000586407 TMEM41BQ5BJD5 291 aa20.38■□□□□ 0.85
LIG3-208ENST00000586407 SLC45A2Q9UMX9 530 aa20.38■□□□□ 0.85
LIG3-208ENST00000586407 K7EPK0 472 aa20.37■□□□□ 0.85
LIG3-208ENST00000586407 L7N2F9 121 aa20.37■□□□□ 0.85
LIG3-208ENST00000586407 GALR1P47211 349 aa20.37■□□□□ 0.85
LIG3-208ENST00000586407 VAMP2P63027 116 aa20.37■□□□□ 0.85
LIG3-208ENST00000586407 MZT2BQ6NZ67 158 aa20.37■□□□□ 0.85
LIG3-208ENST00000586407 UHRF2Q96PU4 802 aa20.37■□□□□ 0.85
LIG3-208ENST00000586407 MGAT4CQ9UBM8 478 aa20.37■□□□□ 0.85
LIG3-208ENST00000586407 ZNF705EA8MWA4 302 aaPredicted RBP20.36■□□□□ 0.85
LIG3-208ENST00000586407 H3BRN7 92 aa20.36■□□□□ 0.85
LIG3-208ENST00000586407 IFITM3Q01628 133 aa20.36■□□□□ 0.85
LIG3-208ENST00000586407 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa20.36■□□□□ 0.85
LIG3-208ENST00000586407 C16orf92Q96LL3 132 aa20.36■□□□□ 0.85
LIG3-208ENST00000586407 SLC25A39Q9BZJ4 359 aaPredicted RBP20.36■□□□□ 0.85
LIG3-208ENST00000586407 SAV1Q9H4B6 383 aaPredicted RBP20.36■□□□□ 0.85
LIG3-208ENST00000586407 NPVFQ9HCQ7 196 aa20.36■□□□□ 0.85
LIG3-208ENST00000586407 PLECQ15149 4684 aaKnown RBP20.36■□□□□ 0.85
LIG3-208ENST00000586407 ISLRO14498 428 aa20.35■□□□□ 0.85
LIG3-208ENST00000586407 OR5G3P0C626 314 aa20.35■□□□□ 0.85
LIG3-208ENST00000586407 IGFL4Q6B9Z1 124 aa20.35■□□□□ 0.85
LIG3-208ENST00000586407 FOXI2Q6ZQN5 318 aa20.35■□□□□ 0.85
LIG3-208ENST00000586407 C2orf50Q96LR7 162 aa20.35■□□□□ 0.85
LIG3-208ENST00000586407 C11orf1Q9H5F2 150 aa20.35■□□□□ 0.85
LIG3-208ENST00000586407 PTTG2Q9NZH5 202 aa20.35■□□□□ 0.85
LIG3-208ENST00000586407 HIGD1AQ9Y241 93 aa20.35■□□□□ 0.85
LIG3-208ENST00000586407 UPK1BO75841 260 aa20.34■□□□□ 0.85
LIG3-208ENST00000586407 BCAP31P51572 246 aa20.34■□□□□ 0.85
LIG3-208ENST00000586407 OR4B1Q8NGF8 309 aa20.34■□□□□ 0.85
LIG3-208ENST00000586407 LINC00476Q8WZB0 136 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms