RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 VPS13DQ5THJ4 4388 aa12.31□□□□□ -0.44
MBD3-204ENST00000585967 SYNGR2O43760 224 aa12.3□□□□□ -0.44
MBD3-204ENST00000585967 PITX3O75364 302 aa12.3□□□□□ -0.44
MBD3-204ENST00000585967 SPART-AS1P0CW21 52 aa12.3□□□□□ -0.44
MBD3-204ENST00000585967 P0DMU3 169 aa12.3□□□□□ -0.44
MBD3-204ENST00000585967 FAM231AP0DMU4 169 aa12.3□□□□□ -0.44
MBD3-204ENST00000585967 FAM231CP0DMU5 169 aa12.3□□□□□ -0.44
MBD3-204ENST00000585967 IAPPP10997 89 aa12.3□□□□□ -0.44
MBD3-204ENST00000585967 UBE2MP61081 183 aaKnown RBP12.3□□□□□ -0.44
MBD3-204ENST00000585967 S100A7AQ86SG5 101 aa12.3□□□□□ -0.44
MBD3-204ENST00000585967 BPIFCQ8NFQ6 507 aa12.3□□□□□ -0.44
MBD3-204ENST00000585967 TRIM63Q969Q1 353 aa12.3□□□□□ -0.44
MBD3-204ENST00000585967 RPRMQ9NS64 109 aa12.3□□□□□ -0.44
MBD3-204ENST00000585967 GOLT1BQ9Y3E0 138 aa12.3□□□□□ -0.44
MBD3-204ENST00000585967 DNAH10Q8IVF4 4471 aa12.29□□□□□ -0.44
MBD3-204ENST00000585967 AKR1C1Q04828 323 aa12.29□□□□□ -0.44
MBD3-204ENST00000585967 SPANXN2Q5MJ10 180 aa12.29□□□□□ -0.44
MBD3-204ENST00000585967 ZNF705AQ6ZN79 300 aaPredicted RBP12.29□□□□□ -0.44
MBD3-204ENST00000585967 THAP8Q8NA92 274 aa12.29□□□□□ -0.44
MBD3-204ENST00000585967 OR4B1Q8NGF8 309 aa12.29□□□□□ -0.44
MBD3-204ENST00000585967 RFNGQ9Y644 331 aa12.29□□□□□ -0.44
MBD3-204ENST00000585967 IGKV1D-37A0A075B6S9 117 aa12.28□□□□□ -0.44
MBD3-204ENST00000585967 WRBO00258 174 aa12.28□□□□□ -0.44
MBD3-204ENST00000585967 SFT2D2O95562 160 aa12.28□□□□□ -0.44
MBD3-204ENST00000585967 OR2F1Q13607 317 aa12.28□□□□□ -0.44
MBD3-204ENST00000585967 C16orf92Q96LL3 132 aa12.28□□□□□ -0.44
MBD3-204ENST00000585967 C7orf50Q9BRJ6 194 aaKnown RBP12.28□□□□□ -0.44
MBD3-204ENST00000585967 IGHV3OR16-12A0A075B7B8 117 aa12.27□□□□□ -0.45
MBD3-204ENST00000585967 ZNF705FA8MVS1 300 aaPredicted RBP12.27□□□□□ -0.45
MBD3-204ENST00000585967 IGKV3-20P01619 116 aa12.27□□□□□ -0.45
MBD3-204ENST00000585967 ZNF705DP0CH99 300 aaPredicted RBP12.27□□□□□ -0.45
MBD3-204ENST00000585967 ZNF705BP0CI00 300 aaPredicted RBP12.27□□□□□ -0.45
MBD3-204ENST00000585967 PAX9P55771 341 aa12.27□□□□□ -0.45
MBD3-204ENST00000585967 OR4D5Q8NGN0 318 aa12.27□□□□□ -0.45
MBD3-204ENST00000585967 OR1B1Q8NGR6 318 aa12.27□□□□□ -0.45
MBD3-204ENST00000585967 TMEM147Q9BVK8 224 aa12.27□□□□□ -0.45
MBD3-204ENST00000585967 WDR12Q9GZL7 423 aaKnown RBP12.27□□□□□ -0.45
MBD3-204ENST00000585967 SLC25A22Q9H936 323 aa12.27□□□□□ -0.45
MBD3-204ENST00000585967 CELA1Q9UNI1 258 aa12.27□□□□□ -0.45
MBD3-204ENST00000585967 RNF24Q9Y225 148 aa12.27□□□□□ -0.45
MBD3-204ENST00000585967 STRAPQ9Y3F4 350 aaKnown RBP12.27□□□□□ -0.45
MBD3-204ENST00000585967 HECTD4Q9Y4D8 3996 aa12.27□□□□□ -0.45
MBD3-204ENST00000585967 HBE1P02100 147 aa12.26□□□□□ -0.45
MBD3-204ENST00000585967 HOXB5P09067 269 aa12.26□□□□□ -0.45
MBD3-204ENST00000585967 PSG9Q00887 426 aa12.26□□□□□ -0.45
MBD3-204ENST00000585967 PPP1R1AQ13522 171 aa12.26□□□□□ -0.45
MBD3-204ENST00000585967 C12orf74Q32Q52 190 aa12.26□□□□□ -0.45
MBD3-204ENST00000585967 SPANXN5Q5MJ07 72 aa12.26□□□□□ -0.45
MBD3-204ENST00000585967 LINC00336Q6ZUF6 198 aa12.26□□□□□ -0.45
MBD3-204ENST00000585967 FAM210BQ96KR6 192 aa12.26□□□□□ -0.45
MBD3-204ENST00000585967 V9GYH0 126 aa12.26□□□□□ -0.45
MBD3-204ENST00000585967 NAP1L6A6NFF2 107 aa12.25□□□□□ -0.45
MBD3-204ENST00000585967 SOCS3O14543 225 aa12.25□□□□□ -0.45
MBD3-204ENST00000585967 IFNA21P01568 189 aa12.25□□□□□ -0.45
MBD3-204ENST00000585967 EMP1P54849 157 aa12.25□□□□□ -0.45
MBD3-204ENST00000585967 PRR20EP86478 221 aa12.25□□□□□ -0.45
MBD3-204ENST00000585967 PRR20CP86479 221 aa12.25□□□□□ -0.45
MBD3-204ENST00000585967 PRR20DP86480 221 aa12.25□□□□□ -0.45
MBD3-204ENST00000585967 PRR20BP86481 221 aa12.25□□□□□ -0.45
MBD3-204ENST00000585967 PRR20AP86496 221 aa12.25□□□□□ -0.45
MBD3-204ENST00000585967 ZNF79Q15937 498 aa12.25□□□□□ -0.45
MBD3-204ENST00000585967 GDF5OSQ5U4N7 250 aa12.25□□□□□ -0.45
MBD3-204ENST00000585967 TRIQKQ629K1 86 aa12.25□□□□□ -0.45
MBD3-204ENST00000585967 TMEM208Q9BTX3 173 aa12.25□□□□□ -0.45
MBD3-204ENST00000585967 MAGT1Q9H0U3 335 aa12.25□□□□□ -0.45
MBD3-204ENST00000585967 CENPXA8MT69 81 aa12.24□□□□□ -0.45
MBD3-204ENST00000585967 RAP2BP61225 183 aa12.24□□□□□ -0.45
MBD3-204ENST00000585967 ZNF767PQ75MW2 155 aa12.24□□□□□ -0.45
MBD3-204ENST00000585967 DOK5Q9P104 306 aa12.24□□□□□ -0.45
MBD3-204ENST00000585967 IGKV1OR2-108A0A075B7D4 117 aa12.23□□□□□ -0.45
MBD3-204ENST00000585967 A0A0J9YX75 114 aa12.23□□□□□ -0.45
MBD3-204ENST00000585967 SMCO3A2RU48 225 aa12.23□□□□□ -0.45
MBD3-204ENST00000585967 ZNF98A6NK75 572 aa12.23□□□□□ -0.45
MBD3-204ENST00000585967 DUSP14O95147 198 aaKnown RBP12.23□□□□□ -0.45
MBD3-204ENST00000585967 ORM2P19652 201 aa12.23□□□□□ -0.45
MBD3-204ENST00000585967 FXYD7P58549 80 aa12.23□□□□□ -0.45
MBD3-204ENST00000585967 RRN3P1Q2M238 152 aa12.23□□□□□ -0.45
MBD3-204ENST00000585967 FAM78BQ5VT40 261 aa12.23□□□□□ -0.45
MBD3-204ENST00000585967 ACOT7LQ6ZUV0 252 aa12.23□□□□□ -0.45
MBD3-204ENST00000585967 UBE2DNLQ8IWF7 75 aa12.23□□□□□ -0.45
MBD3-204ENST00000585967 POM121L12Q8N7R1 296 aa12.23□□□□□ -0.45
MBD3-204ENST00000585967 ZNF709Q8N972 641 aa12.23□□□□□ -0.45
MBD3-204ENST00000585967 NIPSNAP3BQ9BS92 247 aa12.23□□□□□ -0.45
MBD3-204ENST00000585967 SLC25A32Q9H2D1 315 aa12.23□□□□□ -0.45
MBD3-204ENST00000585967 H3BP45 60 aa12.22□□□□□ -0.45
MBD3-204ENST00000585967 IL5P05113 134 aa12.22□□□□□ -0.45
MBD3-204ENST00000585967 RPL7P18124 248 aaKnown RBP12.22□□□□□ -0.45
MBD3-204ENST00000585967 B2MP61769 119 aa12.22□□□□□ -0.45
MBD3-204ENST00000585967 SELENOTP62341 195 aa12.22□□□□□ -0.45
MBD3-204ENST00000585967 OXA1LQ15070 435 aa12.22□□□□□ -0.45
MBD3-204ENST00000585967 TMEM144Q7Z5S9 345 aa12.22□□□□□ -0.45
MBD3-204ENST00000585967 CCDC190Q86UF4 302 aa12.22□□□□□ -0.45
MBD3-204ENST00000585967 RSG1Q9BU20 258 aa12.22□□□□□ -0.45
MBD3-204ENST00000585967 SLC35B3Q9H1N7 401 aa12.22□□□□□ -0.45
MBD3-204ENST00000585967 LOC102723971A0A1B0GUV8 181 aa12.21□□□□□ -0.45
MBD3-204ENST00000585967 PRSS46E5RG02 174 aa12.21□□□□□ -0.45
MBD3-204ENST00000585967 ZNF701M0R085 212 aaPredicted RBP12.21□□□□□ -0.45
MBD3-204ENST00000585967 INSP01308 110 aa12.21□□□□□ -0.45
MBD3-204ENST00000585967 DKK2Q9UBU2 259 aa12.21□□□□□ -0.45
MBD3-204ENST00000585967 HIGD1AQ9Y241 93 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms