RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 HSPB1P04792 205 aaKnown RBP9.78□□□□□ -0.84
VMP1-202ENST00000585847 MEOX2P50222 304 aa9.78□□□□□ -0.84
VMP1-202ENST00000585847 PRR31Q5SQ13 230 aa9.78□□□□□ -0.84
VMP1-202ENST00000585847 LCE2DQ5TA82 110 aaPredicted RBP9.78□□□□□ -0.84
VMP1-202ENST00000585847 FAM78BQ5VT40 261 aa9.78□□□□□ -0.84
VMP1-202ENST00000585847 LCNL1Q6ZST4 164 aa9.78□□□□□ -0.84
VMP1-202ENST00000585847 RNF125Q96EQ8 232 aa9.78□□□□□ -0.84
VMP1-202ENST00000585847 GPR82Q96P67 336 aa9.78□□□□□ -0.84
VMP1-202ENST00000585847 KLK15Q9H2R5 256 aa9.78□□□□□ -0.84
VMP1-202ENST00000585847 SLC25A22Q9H936 323 aa9.78□□□□□ -0.84
VMP1-202ENST00000585847 TGOLN2O43493 480 aa9.77□□□□□ -0.85
VMP1-202ENST00000585847 CD5P06127 495 aa9.77□□□□□ -0.85
VMP1-202ENST00000585847 CTSGP08311 255 aa9.77□□□□□ -0.85
VMP1-202ENST00000585847 BCL2P10415 239 aa9.77□□□□□ -0.85
VMP1-202ENST00000585847 PSG1P11464 419 aa9.77□□□□□ -0.85
VMP1-202ENST00000585847 ZNF726P1Q15940 193 aa9.77□□□□□ -0.85
VMP1-202ENST00000585847 MLANAQ16655 118 aa9.77□□□□□ -0.85
VMP1-202ENST00000585847 ZNF506Q5JVG8 444 aa9.77□□□□□ -0.85
VMP1-202ENST00000585847 ZNF343Q6P1L6 599 aa9.77□□□□□ -0.85
VMP1-202ENST00000585847 C11orf44Q8N8P7 122 aa9.77□□□□□ -0.85
VMP1-202ENST00000585847 OR4X2Q8NGF9 303 aa9.77□□□□□ -0.85
VMP1-202ENST00000585847 MYOZ3Q8TDC0 251 aa9.77□□□□□ -0.85
VMP1-202ENST00000585847 UBE2E2Q96LR5 201 aa9.77□□□□□ -0.85
VMP1-202ENST00000585847 VSIRQ9H7M9 311 aa9.77□□□□□ -0.85
VMP1-202ENST00000585847 MRPL36Q9P0J6 103 aaKnown RBP9.77□□□□□ -0.85
VMP1-202ENST00000585847 TMEM14CQ9P0S9 112 aa9.77□□□□□ -0.85
VMP1-202ENST00000585847 VAX2Q9UIW0 290 aa9.77□□□□□ -0.85
VMP1-202ENST00000585847 TGP01266 2768 aa9.77□□□□□ -0.85
VMP1-202ENST00000585847 WI2-2373I1.2A0A1W2PRP0 233 aa9.76□□□□□ -0.85
VMP1-202ENST00000585847 F8W735 103 aaPredicted RBP9.76□□□□□ -0.85
VMP1-202ENST00000585847 TMEM250H0YL14 139 aa9.76□□□□□ -0.85
VMP1-202ENST00000585847 PDE6DO43924 150 aa9.76□□□□□ -0.85
VMP1-202ENST00000585847 RPLP1P05386 114 aaKnown RBP9.76□□□□□ -0.85
VMP1-202ENST00000585847 PF4V1P10720 104 aa9.76□□□□□ -0.85
VMP1-202ENST00000585847 ZP3P21754 424 aa9.76□□□□□ -0.85
VMP1-202ENST00000585847 BMI1P35226 326 aa9.76□□□□□ -0.85
VMP1-202ENST00000585847 ZNF90Q03938 601 aa9.76□□□□□ -0.85
VMP1-202ENST00000585847 GUK1Q16774 197 aa9.76□□□□□ -0.85
VMP1-202ENST00000585847 TIGITQ495A1 244 aa9.76□□□□□ -0.85
VMP1-202ENST00000585847 C1orf194Q5T5A4 169 aa9.76□□□□□ -0.85
VMP1-202ENST00000585847 LCN15Q6UWW0 184 aa9.76□□□□□ -0.85
VMP1-202ENST00000585847 C18orf65Q6ZTR6 163 aa9.76□□□□□ -0.85
VMP1-202ENST00000585847 NARS2Q96I59 477 aaKnown RBP9.76□□□□□ -0.85
VMP1-202ENST00000585847 CITED2Q99967 270 aaPredicted RBP9.76□□□□□ -0.85
VMP1-202ENST00000585847 MRPL27Q9P0M9 148 aaKnown RBP9.76□□□□□ -0.85
VMP1-202ENST00000585847 RBFOX3A6NFN3 312 aa9.75□□□□□ -0.85
VMP1-202ENST00000585847 NDUFA4O00483 81 aa9.75□□□□□ -0.85
VMP1-202ENST00000585847 IL4P05112 153 aa9.75□□□□□ -0.85
VMP1-202ENST00000585847 CLEC3BP05452 202 aa9.75□□□□□ -0.85
VMP1-202ENST00000585847 GPR183P32249 361 aa9.75□□□□□ -0.85
VMP1-202ENST00000585847 DEFA5Q01523 94 aa9.75□□□□□ -0.85
VMP1-202ENST00000585847 DEFA6Q01524 100 aa9.75□□□□□ -0.85
VMP1-202ENST00000585847 SAMD13Q5VXD3 122 aa9.75□□□□□ -0.85
VMP1-202ENST00000585847 LINC00305Q7Z4B0 112 aa9.75□□□□□ -0.85
VMP1-202ENST00000585847 ZNF491Q8N8L2 437 aa9.75□□□□□ -0.85
VMP1-202ENST00000585847 OR1B1Q8NGR6 318 aa9.75□□□□□ -0.85
VMP1-202ENST00000585847 TMEM37Q8WXS4 190 aa9.75□□□□□ -0.85
VMP1-202ENST00000585847 CCDC140Q96MF4 163 aa9.75□□□□□ -0.85
VMP1-202ENST00000585847 SHANK2-AS3Q9BTD1 123 aa9.75□□□□□ -0.85
VMP1-202ENST00000585847 EIF5A2Q9GZV4 153 aaKnown RBP9.75□□□□□ -0.85
VMP1-202ENST00000585847 SEPSECSQ9HD40 501 aaKnown RBP9.75□□□□□ -0.85
VMP1-202ENST00000585847 LOC102723971A0A1B0GUV8 181 aa9.74□□□□□ -0.85
VMP1-202ENST00000585847 A0A1W2PRE2 83 aa9.74□□□□□ -0.85
VMP1-202ENST00000585847 OR2T8A6NH00 312 aa9.74□□□□□ -0.85
VMP1-202ENST00000585847 HMGB3O15347 200 aaKnown RBP9.74□□□□□ -0.85
VMP1-202ENST00000585847 GGCTO75223 188 aaKnown RBP9.74□□□□□ -0.85
VMP1-202ENST00000585847 ARL14EPLP0DKL9 152 aa9.74□□□□□ -0.85
VMP1-202ENST00000585847 RPL7P18124 248 aaKnown RBP9.74□□□□□ -0.85
VMP1-202ENST00000585847 ORM2P19652 201 aa9.74□□□□□ -0.85
VMP1-202ENST00000585847 GCHFRP30047 84 aa9.74□□□□□ -0.85
VMP1-202ENST00000585847 ARL3P36405 182 aa9.74□□□□□ -0.85
VMP1-202ENST00000585847 LYZP61626 148 aa9.74□□□□□ -0.85
VMP1-202ENST00000585847 MEF2BQ02080 365 aaPredicted RBP9.74□□□□□ -0.85
VMP1-202ENST00000585847 PDE6HQ13956 83 aa9.74□□□□□ -0.85
VMP1-202ENST00000585847 BPIFA4PQ86YQ2 179 aa9.74□□□□□ -0.85
VMP1-202ENST00000585847 SLC7A5P1Q8MH63 180 aa9.74□□□□□ -0.85
VMP1-202ENST00000585847 PCNPQ8WW12 178 aaKnown RBP9.74□□□□□ -0.85
VMP1-202ENST00000585847 RPUSD4Q96CM3 377 aaKnown RBP9.74□□□□□ -0.85
VMP1-202ENST00000585847 CITED4Q96RK1 184 aa9.74□□□□□ -0.85
VMP1-202ENST00000585847 SLC35B3Q9H1N7 401 aa9.74□□□□□ -0.85
VMP1-202ENST00000585847 GNG13Q9P2W3 67 aa9.74□□□□□ -0.85
VMP1-202ENST00000585847 RABAC1Q9UI14 185 aa9.74□□□□□ -0.85
VMP1-202ENST00000585847 IGHV3-21A0A0B4J1V1 117 aa9.73□□□□□ -0.85
VMP1-202ENST00000585847 TMEM218A2RU14 115 aa9.73□□□□□ -0.85
VMP1-202ENST00000585847 F6UZH7 168 aa9.73□□□□□ -0.85
VMP1-202ENST00000585847 H3BRN7 92 aa9.73□□□□□ -0.85
VMP1-202ENST00000585847 I3L521 148 aa9.73□□□□□ -0.85
VMP1-202ENST00000585847 OR7C2O60412 319 aa9.73□□□□□ -0.85
VMP1-202ENST00000585847 IGHV3-48P01763 117 aa9.73□□□□□ -0.85
VMP1-202ENST00000585847 UBE2L3P68036 154 aaKnown RBP9.73□□□□□ -0.85
VMP1-202ENST00000585847 FAM74A3Q4VXF1 159 aa9.73□□□□□ -0.85
VMP1-202ENST00000585847 GCSAMLQ5JQS6 135 aa9.73□□□□□ -0.85
VMP1-202ENST00000585847 TOR2AQ5JU69 321 aa9.73□□□□□ -0.85
VMP1-202ENST00000585847 MS4A10Q96PG2 267 aa9.73□□□□□ -0.85
VMP1-202ENST00000585847 METTL26Q96S19 204 aa9.73□□□□□ -0.85
VMP1-202ENST00000585847 SEC11CQ9BY50 192 aa9.73□□□□□ -0.85
VMP1-202ENST00000585847 SLC25A39Q9BZJ4 359 aaPredicted RBP9.73□□□□□ -0.85
VMP1-202ENST00000585847 TMEM231Q9H6L2 316 aa9.73□□□□□ -0.85
VMP1-202ENST00000585847 TREM1Q9NP99 234 aa9.73□□□□□ -0.85
VMP1-202ENST00000585847 PEF1Q9UBV8 284 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms