RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 RBKSQ9H477 322 aa10.23□□□□□ -0.77
SDF2-202ENST00000585428 KCNIP3Q9Y2W7 256 aa10.23□□□□□ -0.77
SDF2-202ENST00000585428 GOLT1BQ9Y3E0 138 aa10.23□□□□□ -0.77
SDF2-202ENST00000585428 YTHDF2Q9Y5A9 579 aaKnown RBP10.23□□□□□ -0.77
SDF2-202ENST00000585428 ZFP92A6NM28 416 aa10.22□□□□□ -0.77
SDF2-202ENST00000585428 F6UB75 175 aa10.22□□□□□ -0.77
SDF2-202ENST00000585428 HBE1P02100 147 aa10.22□□□□□ -0.77
SDF2-202ENST00000585428 CCR6P51684 374 aa10.22□□□□□ -0.77
SDF2-202ENST00000585428 FAM3BP58499 235 aaPredicted RBP10.22□□□□□ -0.77
SDF2-202ENST00000585428 MRPS10P82664 201 aaKnown RBP10.22□□□□□ -0.77
SDF2-202ENST00000585428 DTD1Q8TEA8 209 aa10.22□□□□□ -0.77
SDF2-202ENST00000585428 C17orf77Q96MU5 243 aa10.22□□□□□ -0.77
SDF2-202ENST00000585428 PRR13Q9NZ81 148 aa10.22□□□□□ -0.77
SDF2-202ENST00000585428 MUC4Q99102 2169 aa10.22□□□□□ -0.77
SDF2-202ENST00000585428 A0A0B4J2A0 478 aa10.21□□□□□ -0.77
SDF2-202ENST00000585428 LOC102723971A0A1B0GUV8 181 aa10.21□□□□□ -0.77
SDF2-202ENST00000585428 CTDSP2O14595 271 aa10.21□□□□□ -0.77
SDF2-202ENST00000585428 HTN3P15516 51 aa10.21□□□□□ -0.77
SDF2-202ENST00000585428 SMCO1Q147U7 214 aa10.21□□□□□ -0.77
SDF2-202ENST00000585428 RRN3P1Q2M238 152 aa10.21□□□□□ -0.77
SDF2-202ENST00000585428 EBLN2Q6P2I7 272 aa10.21□□□□□ -0.77
SDF2-202ENST00000585428 TMEM88Q6PEY1 159 aa10.21□□□□□ -0.77
SDF2-202ENST00000585428 AMTNQ6UX39 209 aa10.21□□□□□ -0.77
SDF2-202ENST00000585428 LYZL2Q7Z4W2 148 aa10.21□□□□□ -0.77
SDF2-202ENST00000585428 OR51S1Q8NGJ8 323 aa10.21□□□□□ -0.77
SDF2-202ENST00000585428 OR4C16Q8NGL9 310 aa10.21□□□□□ -0.77
SDF2-202ENST00000585428 COQ8AQ8NI60 647 aa10.21□□□□□ -0.77
SDF2-202ENST00000585428 SMIM4Q8WVI0 70 aa10.21□□□□□ -0.77
SDF2-202ENST00000585428 C20orf173Q96LM9 149 aa10.21□□□□□ -0.77
SDF2-202ENST00000585428 SHPKQ9UHJ6 478 aa10.21□□□□□ -0.77
SDF2-202ENST00000585428 DNAH11Q96DT5 4516 aa10.21□□□□□ -0.78
SDF2-202ENST00000585428 IGKV1OR2-108A0A075B7D4 117 aa10.2□□□□□ -0.78
SDF2-202ENST00000585428 CTDSPLO15194 276 aa10.2□□□□□ -0.78
SDF2-202ENST00000585428 AKAIN1P0CW23 69 aa10.2□□□□□ -0.78
SDF2-202ENST00000585428 OR8I2Q8N0Y5 310 aa10.2□□□□□ -0.78
SDF2-202ENST00000585428 TRGV9Q99603 122 aa10.2□□□□□ -0.78
SDF2-202ENST00000585428 PRRT1Q99946 306 aa10.2□□□□□ -0.78
SDF2-202ENST00000585428 C7orf50Q9BRJ6 194 aaKnown RBP10.2□□□□□ -0.78
SDF2-202ENST00000585428 RPRMQ9NS64 109 aa10.2□□□□□ -0.78
SDF2-202ENST00000585428 PRM2P04554 102 aa10.19□□□□□ -0.78
SDF2-202ENST00000585428 FABP1P07148 127 aa10.19□□□□□ -0.78
SDF2-202ENST00000585428 LYZP61626 148 aa10.19□□□□□ -0.78
SDF2-202ENST00000585428 DAD1P61803 113 aa10.19□□□□□ -0.78
SDF2-202ENST00000585428 C15orf53Q8NAA6 179 aa10.19□□□□□ -0.78
SDF2-202ENST00000585428 IGF2BP2-AS1Q96M15 143 aa10.19□□□□□ -0.78
SDF2-202ENST00000585428 MAGT1Q9H0U3 335 aa10.19□□□□□ -0.78
SDF2-202ENST00000585428 DOK5Q9P104 306 aa10.19□□□□□ -0.78
SDF2-202ENST00000585428 RGS5O15539 181 aa10.18□□□□□ -0.78
SDF2-202ENST00000585428 PITX3O75364 302 aa10.18□□□□□ -0.78
SDF2-202ENST00000585428 ALDH3B2P48448 385 aa10.18□□□□□ -0.78
SDF2-202ENST00000585428 TNP2Q05952 138 aa10.18□□□□□ -0.78
SDF2-202ENST00000585428 OR2F1Q13607 317 aa10.18□□□□□ -0.78
SDF2-202ENST00000585428 SAMD13Q5VXD3 122 aa10.18□□□□□ -0.78
SDF2-202ENST00000585428 CLVS1Q8IUQ0 354 aaPredicted RBP10.18□□□□□ -0.78
SDF2-202ENST00000585428 SLC35E1Q96K37 410 aa10.18□□□□□ -0.78
SDF2-202ENST00000585428 ANKRD20A5PA0PJZ0 165 aa10.17□□□□□ -0.78
SDF2-202ENST00000585428 CRXO43186 299 aaPredicted RBP10.17□□□□□ -0.78
SDF2-202ENST00000585428 CDK2AP2O75956 126 aa10.17□□□□□ -0.78
SDF2-202ENST00000585428 MEOX2P50222 304 aa10.17□□□□□ -0.78
SDF2-202ENST00000585428 THAP8Q8NA92 274 aa10.17□□□□□ -0.78
SDF2-202ENST00000585428 C16orf92Q96LL3 132 aa10.17□□□□□ -0.78
SDF2-202ENST00000585428 SCGB3A2Q96PL1 93 aa10.17□□□□□ -0.78
SDF2-202ENST00000585428 RSG1Q9BU20 258 aa10.17□□□□□ -0.78
SDF2-202ENST00000585428 ZNF98A6NK75 572 aa10.16□□□□□ -0.78
SDF2-202ENST00000585428 LYRM9A8MSI8 78 aa10.16□□□□□ -0.78
SDF2-202ENST00000585428 ZNF705GA8MUZ8 300 aaPredicted RBP10.16□□□□□ -0.78
SDF2-202ENST00000585428 CFDP00746 253 aaPredicted RBP10.16□□□□□ -0.78
SDF2-202ENST00000585428 AKR1C4P17516 323 aa10.16□□□□□ -0.78
SDF2-202ENST00000585428 TSPOP30536 169 aa10.16□□□□□ -0.78
SDF2-202ENST00000585428 GALR1P47211 349 aa10.16□□□□□ -0.78
SDF2-202ENST00000585428 GGNBP1Q5YKI7 109 aa10.16□□□□□ -0.78
SDF2-202ENST00000585428 OR4D5Q8NGN0 318 aa10.16□□□□□ -0.78
SDF2-202ENST00000585428 ZNRF2Q8NHG8 242 aa10.16□□□□□ -0.78
SDF2-202ENST00000585428 PPP1R14BQ96C90 147 aa10.16□□□□□ -0.78
SDF2-202ENST00000585428 RABL2AQ9UBK7 228 aaPredicted RBP10.16□□□□□ -0.78
SDF2-202ENST00000585428 SCP2D1Q9UJQ7 156 aa10.16□□□□□ -0.78
SDF2-202ENST00000585428 SLC45A2Q9UMX9 530 aa10.16□□□□□ -0.78
SDF2-202ENST00000585428 RABL2BQ9UNT1 228 aa10.16□□□□□ -0.78
SDF2-202ENST00000585428 TMED3Q9Y3Q3 217 aa10.16□□□□□ -0.78
SDF2-202ENST00000585428 NBDYA0A0U1RRE5 68 aa10.15□□□□□ -0.78
SDF2-202ENST00000585428 PLAC8L1A1L4L8 177 aa10.15□□□□□ -0.78
SDF2-202ENST00000585428 PRSS46E5RG02 174 aa10.15□□□□□ -0.78
SDF2-202ENST00000585428 LCE2BO14633 110 aa10.15□□□□□ -0.78
SDF2-202ENST00000585428 B2MP61769 119 aa10.15□□□□□ -0.78
SDF2-202ENST00000585428 RAB11AP62491 216 aa10.15□□□□□ -0.78
SDF2-202ENST00000585428 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.15□□□□□ -0.78
SDF2-202ENST00000585428 TMEM182Q6ZP80 229 aaPredicted RBP10.15□□□□□ -0.78
SDF2-202ENST00000585428 OR11H7Q8NGC8 314 aa10.15□□□□□ -0.78
SDF2-202ENST00000585428 OR1S1Q8NH92 325 aa10.15□□□□□ -0.78
SDF2-202ENST00000585428 DIRAS2Q96HU8 199 aa10.15□□□□□ -0.78
SDF2-202ENST00000585428 TMEM208Q9BTX3 173 aa10.15□□□□□ -0.78
SDF2-202ENST00000585428 SLC25A32Q9H2D1 315 aa10.15□□□□□ -0.78
SDF2-202ENST00000585428 HSPG2P98160 4391 aa10.14□□□□□ -0.79
SDF2-202ENST00000585428 TRAV8-2A0A0B4J237 113 aa10.14□□□□□ -0.79
SDF2-202ENST00000585428 C16orf90A8MZG2 172 aa10.14□□□□□ -0.79
SDF2-202ENST00000585428 DUSP14O95147 198 aaKnown RBP10.14□□□□□ -0.79
SDF2-202ENST00000585428 SMIM18P0DKX4 95 aa10.14□□□□□ -0.79
SDF2-202ENST00000585428 AZU1P20160 251 aa10.14□□□□□ -0.79
SDF2-202ENST00000585428 CNN1P51911 297 aaKnown RBP10.14□□□□□ -0.79
SDF2-202ENST00000585428 SRPXP78539 464 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms