RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 M0R378 163 aa0.09□□□□□ -2.4
SKA2-210ENST00000584089 EIF5AP63241 154 aaKnown RBP0.09□□□□□ -2.4
SKA2-210ENST00000584089 EXOC3-AS1Q8N2X6 119 aa0.09□□□□□ -2.4
SKA2-210ENST00000584089 SLC25A40Q8TBP6 338 aa0.09□□□□□ -2.4
SKA2-210ENST00000584089 PSTPIP2Q9H939 334 aa0.09□□□□□ -2.4
SKA2-210ENST00000584089 NCOA1Q15788 1441 aa0.09□□□□□ -2.4
SKA2-210ENST00000584089 CECR2Q9BXF3 1484 aa0.09□□□□□ -2.4
SKA2-210ENST00000584089 TET1Q8NFU7 2136 aa0.08□□□□□ -2.4
SKA2-210ENST00000584089 PIK3C2GO75747 1445 aa0.08□□□□□ -2.4
SKA2-210ENST00000584089 SRIP30626 198 aa0.08□□□□□ -2.4
SKA2-210ENST00000584089 SRP14P37108 136 aaKnown RBP0.08□□□□□ -2.4
SKA2-210ENST00000584089 SPINK7P58062 85 aa0.08□□□□□ -2.4
SKA2-210ENST00000584089 EDDM3AQ14507 147 aa0.08□□□□□ -2.4
SKA2-210ENST00000584089 C4orf22Q6V702 233 aa0.08□□□□□ -2.4
SKA2-210ENST00000584089 TRAPPC5Q8IUR0 188 aa0.08□□□□□ -2.4
SKA2-210ENST00000584089 OR52L1Q8NGH7 329 aa0.08□□□□□ -2.4
SKA2-210ENST00000584089 PSMF1Q92530 271 aa0.08□□□□□ -2.4
SKA2-210ENST00000584089 CCDC42Q96M95 316 aa0.08□□□□□ -2.4
SKA2-210ENST00000584089 TRIM4Q9C037 500 aa0.08□□□□□ -2.4
SKA2-210ENST00000584089 UQCC1Q9NVA1 299 aa0.08□□□□□ -2.4
SKA2-210ENST00000584089 SYNE1Q8NF91 8797 aaKnown RBP0.08□□□□□ -2.4
SKA2-210ENST00000584089 KIF1BO60333 1816 aa0.08□□□□□ -2.4
SKA2-210ENST00000584089 MEGF8Q7Z7M0 2845 aa0.07□□□□□ -2.4
SKA2-210ENST00000584089 TRGV10A0A0A0MS01 117 aa0.07□□□□□ -2.4
SKA2-210ENST00000584089 TRAV10A0A0B4J240 114 aa0.07□□□□□ -2.4
SKA2-210ENST00000584089 A8MWV9 139 aa0.07□□□□□ -2.4
SKA2-210ENST00000584089 ROMO1P60602 79 aa0.07□□□□□ -2.4
SKA2-210ENST00000584089 HIST1H3AP68431 136 aa0.07□□□□□ -2.4
SKA2-210ENST00000584089 H3F3AP84243 136 aa0.07□□□□□ -2.4
SKA2-210ENST00000584089 LYRM7Q5U5X0 104 aa0.07□□□□□ -2.4
SKA2-210ENST00000584089 CANT1Q8WVQ1 401 aa0.07□□□□□ -2.4
SKA2-210ENST00000584089 LYSMD1Q96S90 227 aa0.07□□□□□ -2.4
SKA2-210ENST00000584089 PARD6GQ9BYG4 376 aaPredicted RBP0.07□□□□□ -2.4
SKA2-210ENST00000584089 RNASE7Q9H1E1 156 aaKnown RBP0.07□□□□□ -2.4
SKA2-210ENST00000584089 GLTPQ9NZD2 209 aa0.07□□□□□ -2.4
SKA2-210ENST00000584089 PCTPQ9UKL6 214 aa0.07□□□□□ -2.4
SKA2-210ENST00000584089 FANCMQ8IYD8 2048 aa0.06□□□□□ -2.4
SKA2-210ENST00000584089 H3BRM9 83 aa0.06□□□□□ -2.4
SKA2-210ENST00000584089 PDE6DO43924 150 aa0.06□□□□□ -2.4
SKA2-210ENST00000584089 CD2P06729 351 aa0.06□□□□□ -2.4
SKA2-210ENST00000584089 DSCR4P56555 118 aaPredicted RBP0.06□□□□□ -2.4
SKA2-210ENST00000584089 KRR1Q13601 381 aaKnown RBP0.06□□□□□ -2.4
SKA2-210ENST00000584089 TEN1Q86WV5 123 aa0.06□□□□□ -2.4
SKA2-210ENST00000584089 OR5D14Q8NGL3 314 aa0.06□□□□□ -2.4
SKA2-210ENST00000584089 TMEM126AQ9H061 195 aa0.06□□□□□ -2.4
SKA2-210ENST00000584089 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.06□□□□□ -2.4
SKA2-210ENST00000584089 LY96Q9Y6Y9 160 aa0.06□□□□□ -2.4
SKA2-210ENST00000584089 ARHGEF11O15085 1522 aa0.06□□□□□ -2.4
SKA2-210ENST00000584089 PTPRFP10586 1907 aa0.05□□□□□ -2.4
SKA2-210ENST00000584089 E7EUB6 86 aa0.05□□□□□ -2.4
SKA2-210ENST00000584089 F8W1H4 67 aa0.05□□□□□ -2.4
SKA2-210ENST00000584089 FOXA3P55318 350 aaPredicted RBP0.05□□□□□ -2.4
SKA2-210ENST00000584089 PTRHD1Q6GMV3 140 aaKnown RBP0.05□□□□□ -2.4
SKA2-210ENST00000584089 C22orf39Q6P5X5 142 aa0.05□□□□□ -2.4
SKA2-210ENST00000584089 PDZD9Q8IXQ8 264 aa0.05□□□□□ -2.4
SKA2-210ENST00000584089 OR51A2Q8NGJ7 313 aa0.05□□□□□ -2.4
SKA2-210ENST00000584089 OR10K1Q8NGX5 313 aa0.05□□□□□ -2.4
SKA2-210ENST00000584089 OR10AC1Q8NH08 325 aa0.05□□□□□ -2.4
SKA2-210ENST00000584089 STAG3L4Q8TBR4 150 aa0.05□□□□□ -2.4
SKA2-210ENST00000584089 YPEL2Q96QA6 119 aa0.05□□□□□ -2.4
SKA2-210ENST00000584089 TMEM138Q9NPI0 162 aa0.05□□□□□ -2.4
SKA2-210ENST00000584089 MED29Q9NX70 200 aa0.05□□□□□ -2.4
SKA2-210ENST00000584089 PRELID3BQ9Y3B1 194 aa0.05□□□□□ -2.4
SKA2-210ENST00000584089 PTPRZ1P23471 2315 aaPredicted RBP0.04□□□□□ -2.4
SKA2-210ENST00000584089 ZGRF1Q86YA3 2104 aa0.04□□□□□ -2.4
SKA2-210ENST00000584089 SMIM9A6NGZ8 99 aa0.04□□□□□ -2.4
SKA2-210ENST00000584089 NDUFB3O43676 98 aa0.04□□□□□ -2.4
SKA2-210ENST00000584089 RPP14O95059 124 aaKnown RBP0.04□□□□□ -2.4
SKA2-210ENST00000584089 COX7CP15954 63 aa0.04□□□□□ -2.4
SKA2-210ENST00000584089 CEBPGP53567 150 aa0.04□□□□□ -2.4
SKA2-210ENST00000584089 DEFA3P59666 94 aa0.04□□□□□ -2.4
SKA2-210ENST00000584089 Q6ZS92 163 aa0.04□□□□□ -2.4
SKA2-210ENST00000584089 ATOH7Q8N100 152 aa0.04□□□□□ -2.4
SKA2-210ENST00000584089 ZNF431Q8TF32 576 aaPredicted RBP0.04□□□□□ -2.4
SKA2-210ENST00000584089 SLC25A21Q9BQT8 299 aaPredicted RBP0.04□□□□□ -2.4
SKA2-210ENST00000584089 UCK1Q9HA47 277 aa0.04□□□□□ -2.4
SKA2-210ENST00000584089 FMN1Q68DA7 1419 aa0.04□□□□□ -2.4
SKA2-210ENST00000584089 IGSF10Q6WRI0 2623 aa0.03□□□□□ -2.4
SKA2-210ENST00000584089 ERC2-IT1O76042 136 aa0.03□□□□□ -2.4
SKA2-210ENST00000584089 LYPLA2O95372 231 aa0.03□□□□□ -2.4
SKA2-210ENST00000584089 RPS17P08708 135 aaKnown RBP0.03□□□□□ -2.4
SKA2-210ENST00000584089 FREM3P0C091 2139 aa0.03□□□□□ -2.4
SKA2-210ENST00000584089 PIGPP57054 158 aa0.03□□□□□ -2.4
SKA2-210ENST00000584089 RANP62826 216 aaKnown RBP0.03□□□□□ -2.4
SKA2-210ENST00000584089 AESQ08117 197 aa0.03□□□□□ -2.4
SKA2-210ENST00000584089 RRN3P1Q2M238 152 aa0.03□□□□□ -2.4
SKA2-210ENST00000584089 TMEM97Q5BJF2 176 aa0.03□□□□□ -2.4
SKA2-210ENST00000584089 TSKUQ8WUA8 353 aa0.03□□□□□ -2.4
SKA2-210ENST00000584089 ADCY9O60503 1353 aa0.03□□□□□ -2.4
SKA2-210ENST00000584089 DMBT1Q9UGM3 2413 aaPredicted RBP0.02□□□□□ -2.41
SKA2-210ENST00000584089 TRAV4A0A0B4J268 109 aa0.02□□□□□ -2.41
SKA2-210ENST00000584089 CXCL8P10145 99 aa0.02□□□□□ -2.41
SKA2-210ENST00000584089 PARVBQ9HBI1 364 aa0.02□□□□□ -2.41
SKA2-210ENST00000584089 KNTC1P50748 2209 aa0.02□□□□□ -2.41
SKA2-210ENST00000584089 MYLKQ15746 1914 aa0.01□□□□□ -2.41
SKA2-210ENST00000584089 HAND1O96004 215 aa0.01□□□□□ -2.41
SKA2-210ENST00000584089 TCRBP04435 133 aa0.01□□□□□ -2.41
SKA2-210ENST00000584089 ZNF137PP52743 207 aa0.01□□□□□ -2.41
SKA2-210ENST00000584089 MYL5Q02045 173 aa0.01□□□□□ -2.41
SKA2-210ENST00000584089 BCL2L15Q5TBC7 163 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms