RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 LGALS9O00182 355 aa12.81□□□□□ -0.36
CDK5RAP3-230ENST00000584042 RHOBP62745 196 aa12.81□□□□□ -0.36
CDK5RAP3-230ENST00000584042 HIST2H2BDQ6DRA6 164 aa12.81□□□□□ -0.36
CDK5RAP3-230ENST00000584042 FAM122CQ6P4D5 195 aa12.81□□□□□ -0.36
CDK5RAP3-230ENST00000584042 UNQ9165/PRO28630Q6UXU0 137 aa12.81□□□□□ -0.36
CDK5RAP3-230ENST00000584042 PATE2Q6UY27 113 aa12.81□□□□□ -0.36
CDK5RAP3-230ENST00000584042 C1QL4Q86Z23 238 aa12.81□□□□□ -0.36
CDK5RAP3-230ENST00000584042 RPP25LQ8N5L8 163 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-230ENST00000584042 RAX2Q96IS3 184 aa12.81□□□□□ -0.36
CDK5RAP3-230ENST00000584042 DNAJC4Q9NNZ3 241 aa12.81□□□□□ -0.36
CDK5RAP3-230ENST00000584042 RABAC1Q9UI14 185 aa12.81□□□□□ -0.36
CDK5RAP3-230ENST00000584042 CTXND1A0A1B0GTU2 59 aa12.8□□□□□ -0.36
CDK5RAP3-230ENST00000584042 H3BRN7 92 aa12.8□□□□□ -0.36
CDK5RAP3-230ENST00000584042 FAM213BQ8TBF2 198 aa12.8□□□□□ -0.36
CDK5RAP3-230ENST00000584042 SAT2Q96F10 170 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-230ENST00000584042 METTL26Q96S19 204 aa12.8□□□□□ -0.36
CDK5RAP3-230ENST00000584042 ACTR3CQ9C0K3 210 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-230ENST00000584042 SLC25A22Q9H936 323 aa12.8□□□□□ -0.36
CDK5RAP3-230ENST00000584042 RNF24Q9Y225 148 aa12.8□□□□□ -0.36
CDK5RAP3-230ENST00000584042 FUT9Q9Y231 359 aa12.8□□□□□ -0.36
CDK5RAP3-230ENST00000584042 A0A1W2PPV4 95 aa12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 ZNF705EA8MWA4 302 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 K7EMT4 169 aa12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 CCL24O00175 119 aa12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 FHITP49789 147 aa12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 SLURP1P55000 103 aa12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 KLF5Q13887 457 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 ZNF726P1Q15940 193 aa12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 NSUN5P1Q3KNT7 163 aa12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 FAM78BQ5VT40 261 aa12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 LINC00305Q7Z4B0 112 aa12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 UHRF2Q96PU4 802 aa12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 SHANK2-AS3Q9BTD1 123 aa12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 C20orf24Q9BUV8 137 aa12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 ZNF747Q9BV97 191 aa12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 SLC25A39Q9BZJ4 359 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 DAZ1Q9NQZ3 744 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 PFDN2Q9UHV9 154 aa12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 UFC1Q9Y3C8 167 aa12.79□□□□□ -0.36
CDK5RAP3-230ENST00000584042 CRYBB3P26998 211 aa12.78□□□□□ -0.36
CDK5RAP3-230ENST00000584042 MYCNOSP40205 109 aa12.78□□□□□ -0.36
CDK5RAP3-230ENST00000584042 BLOC1S1P78537 153 aa12.78□□□□□ -0.36
CDK5RAP3-230ENST00000584042 MIR17HGQ75NE6 70 aa12.78□□□□□ -0.36
CDK5RAP3-230ENST00000584042 SEPSECSQ9HD40 501 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-230ENST00000584042 TECRQ9NZ01 308 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-230ENST00000584042 IGHV3OR16-8A0A075B7F1 116 aa12.77□□□□□ -0.37
CDK5RAP3-230ENST00000584042 MAP1LC3B2A6NCE7 125 aa12.77□□□□□ -0.37
CDK5RAP3-230ENST00000584042 NMBP08949 121 aa12.77□□□□□ -0.37
CDK5RAP3-230ENST00000584042 SYNJ2BPP57105 145 aa12.77□□□□□ -0.37
CDK5RAP3-230ENST00000584042 TAS2R45P59539 299 aa12.77□□□□□ -0.37
CDK5RAP3-230ENST00000584042 KHDC3LQ587J8 217 aa12.77□□□□□ -0.37
CDK5RAP3-230ENST00000584042 SPATA31B1PQ5VZV4 182 aa12.77□□□□□ -0.37
CDK5RAP3-230ENST00000584042 SSX7Q7RTT5 188 aa12.77□□□□□ -0.37
CDK5RAP3-230ENST00000584042 RAB24Q969Q5 203 aa12.77□□□□□ -0.37
CDK5RAP3-230ENST00000584042 NARS2Q96I59 477 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-230ENST00000584042 DUX3Q96PT4 197 aa12.77□□□□□ -0.37
CDK5RAP3-230ENST00000584042 SCRT1Q9BWW7 348 aa12.77□□□□□ -0.37
CDK5RAP3-230ENST00000584042 MAP1LC3BQ9GZQ8 125 aa12.77□□□□□ -0.37
CDK5RAP3-230ENST00000584042 U3KQE9 123 aa12.77□□□□□ -0.37
CDK5RAP3-230ENST00000584042 ZNF320A2RRD8 509 aa12.76□□□□□ -0.37
CDK5RAP3-230ENST00000584042 TMEM213A2RRL7 107 aa12.76□□□□□ -0.37
CDK5RAP3-230ENST00000584042 STAG3L2P0CL84 134 aa12.76□□□□□ -0.37
CDK5RAP3-230ENST00000584042 STAG3L3P0CL85 134 aa12.76□□□□□ -0.37
CDK5RAP3-230ENST00000584042 C8orf88P0DMB2 117 aa12.76□□□□□ -0.37
CDK5RAP3-230ENST00000584042 NPPCP23582 126 aa12.76□□□□□ -0.37
CDK5RAP3-230ENST00000584042 CLLU1Q5K131 121 aa12.76□□□□□ -0.37
CDK5RAP3-230ENST00000584042 MORN5Q5VZ52 161 aa12.76□□□□□ -0.37
CDK5RAP3-230ENST00000584042 C12orf54Q6X4T0 127 aa12.76□□□□□ -0.37
CDK5RAP3-230ENST00000584042 OR4F17Q8NGA8 305 aa12.76□□□□□ -0.37
CDK5RAP3-230ENST00000584042 MBD3L1Q8WWY6 194 aa12.76□□□□□ -0.37
CDK5RAP3-230ENST00000584042 OR4F4Q96R69 305 aa12.76□□□□□ -0.37
CDK5RAP3-230ENST00000584042 PEMTQ9UBM1 199 aa12.76□□□□□ -0.37
CDK5RAP3-230ENST00000584042 FBN1P35555 2871 aaKnown RBP12.76□□□□□ -0.37
CDK5RAP3-230ENST00000584042 TRAV1-1A0A0B4J248 108 aa12.75□□□□□ -0.37
CDK5RAP3-230ENST00000584042 IGHV7-4-1A0A0J9YVY3 117 aa12.75□□□□□ -0.37
CDK5RAP3-230ENST00000584042 ZNF98A6NK75 572 aa12.75□□□□□ -0.37
CDK5RAP3-230ENST00000584042 HBE1P02100 147 aa12.75□□□□□ -0.37
CDK5RAP3-230ENST00000584042 H2AFB1P0C5Y9 115 aa12.75□□□□□ -0.37
CDK5RAP3-230ENST00000584042 BMI1P35226 326 aa12.75□□□□□ -0.37
CDK5RAP3-230ENST00000584042 RAB14P61106 215 aa12.75□□□□□ -0.37
CDK5RAP3-230ENST00000584042 PQLC2Q6ZP29 291 aa12.75□□□□□ -0.37
CDK5RAP3-230ENST00000584042 MARC2Q969Z3 335 aa12.75□□□□□ -0.37
CDK5RAP3-230ENST00000584042 SLC25A2Q9BXI2 301 aa12.75□□□□□ -0.37
CDK5RAP3-230ENST00000584042 A0A1W2PS18 150 aa12.74□□□□□ -0.37
CDK5RAP3-230ENST00000584042 TEX46H3BTG2 121 aa12.74□□□□□ -0.37
CDK5RAP3-230ENST00000584042 ZNF207O43670 478 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-230ENST00000584042 BUB3O43684 328 aa12.74□□□□□ -0.37
CDK5RAP3-230ENST00000584042 C1orf194Q5T5A4 169 aa12.74□□□□□ -0.37
CDK5RAP3-230ENST00000584042 SHISA2Q6UWI4 295 aa12.74□□□□□ -0.37
CDK5RAP3-230ENST00000584042 C3orf56Q8N813 242 aa12.74□□□□□ -0.37
CDK5RAP3-230ENST00000584042 STXBP6Q8NFX7 210 aa12.74□□□□□ -0.37
CDK5RAP3-230ENST00000584042 OR9G4Q8NGQ1 327 aa12.74□□□□□ -0.37
CDK5RAP3-230ENST00000584042 LYPD6BQ8NI32 183 aa12.74□□□□□ -0.37
CDK5RAP3-230ENST00000584042 DLX4Q92988 240 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-230ENST00000584042 GRAMD2BQ96HH9 432 aa12.74□□□□□ -0.37
CDK5RAP3-230ENST00000584042 FAM167A-AS1Q96KT0 104 aa12.74□□□□□ -0.37
CDK5RAP3-230ENST00000584042 TMEM231Q9H6L2 316 aa12.74□□□□□ -0.37
CDK5RAP3-230ENST00000584042 TENM1Q9UKZ4 2725 aa12.73□□□□□ -0.37
CDK5RAP3-230ENST00000584042 CXorf1O96002 111 aa12.73□□□□□ -0.37
CDK5RAP3-230ENST00000584042 PF4P02776 101 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms