RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 PRR20CP86479 221 aa8.9□□□□□ -0.98
CDRT1-207ENST00000583965 PRR20DP86480 221 aa8.9□□□□□ -0.98
CDRT1-207ENST00000583965 PRR20BP86481 221 aa8.9□□□□□ -0.98
CDRT1-207ENST00000583965 PRR20AP86496 221 aa8.9□□□□□ -0.98
CDRT1-207ENST00000583965 UNQ9165/PRO28630Q6UXU0 137 aa8.9□□□□□ -0.98
CDRT1-207ENST00000583965 Q6ZRG5 221 aa8.9□□□□□ -0.98
CDRT1-207ENST00000583965 S100A7AQ86SG5 101 aa8.9□□□□□ -0.98
CDRT1-207ENST00000583965 SLC7A5P1Q8MH63 180 aa8.9□□□□□ -0.98
CDRT1-207ENST00000583965 STPG3Q8N7X2 389 aa8.9□□□□□ -0.98
CDRT1-207ENST00000583965 OR9G4Q8NGQ1 327 aa8.9□□□□□ -0.98
CDRT1-207ENST00000583965 MARC2Q969Z3 335 aa8.9□□□□□ -0.98
CDRT1-207ENST00000583965 C20orf24Q9BUV8 137 aa8.9□□□□□ -0.98
CDRT1-207ENST00000583965 ELOVL1Q9BW60 279 aa8.9□□□□□ -0.98
CDRT1-207ENST00000583965 SLC39A9Q9NUM3 307 aa8.9□□□□□ -0.98
CDRT1-207ENST00000583965 PXMP4Q9Y6I8 212 aa8.9□□□□□ -0.98
CDRT1-207ENST00000583965 TRRAPQ9Y4A5 3859 aa8.89□□□□□ -0.99
CDRT1-207ENST00000583965 ELOA3CA0A087WX78 387 aaPredicted RBP8.89□□□□□ -0.99
CDRT1-207ENST00000583965 ZNF705EA8MWA4 302 aaPredicted RBP8.89□□□□□ -0.99
CDRT1-207ENST00000583965 NPPCP23582 126 aa8.89□□□□□ -0.99
CDRT1-207ENST00000583965 GATA2P23769 480 aaPredicted RBP8.89□□□□□ -0.99
CDRT1-207ENST00000583965 BMI1P35226 326 aa8.89□□□□□ -0.99
CDRT1-207ENST00000583965 LYZP61626 148 aa8.89□□□□□ -0.99
CDRT1-207ENST00000583965 MIC13Q5XKP0 118 aa8.89□□□□□ -0.99
CDRT1-207ENST00000583965 TMEM182Q6ZP80 229 aaPredicted RBP8.89□□□□□ -0.99
CDRT1-207ENST00000583965 EIF4E3Q8N5X7 224 aaKnown RBP8.89□□□□□ -0.99
CDRT1-207ENST00000583965 PCNPQ8WW12 178 aaKnown RBP8.89□□□□□ -0.99
CDRT1-207ENST00000583965 NARS2Q96I59 477 aaKnown RBP8.89□□□□□ -0.99
CDRT1-207ENST00000583965 METTL26Q96S19 204 aa8.89□□□□□ -0.99
CDRT1-207ENST00000583965 RSG1Q9BU20 258 aa8.89□□□□□ -0.99
CDRT1-207ENST00000583965 SIGLEC8Q9NYZ4 499 aa8.89□□□□□ -0.99
CDRT1-207ENST00000583965 PFDN2Q9UHV9 154 aa8.89□□□□□ -0.99
CDRT1-207ENST00000583965 RABAC1Q9UI14 185 aa8.89□□□□□ -0.99
CDRT1-207ENST00000583965 NOTCH3Q9UM47 2321 aa8.89□□□□□ -0.99
CDRT1-207ENST00000583965 SORL1Q92673 2214 aa8.88□□□□□ -0.99
CDRT1-207ENST00000583965 TMEM213A2RRL7 107 aa8.88□□□□□ -0.99
CDRT1-207ENST00000583965 C2orf70A6NJV1 201 aa8.88□□□□□ -0.99
CDRT1-207ENST00000583965 HYPMO75409 117 aa8.88□□□□□ -0.99
CDRT1-207ENST00000583965 MBP02144 154 aa8.88□□□□□ -0.99
CDRT1-207ENST00000583965 C8orf88P0DMB2 117 aa8.88□□□□□ -0.99
CDRT1-207ENST00000583965 CD33P20138 364 aa8.88□□□□□ -0.99
CDRT1-207ENST00000583965 CRYBB3P26998 211 aa8.88□□□□□ -0.99
CDRT1-207ENST00000583965 USF2Q15853 346 aaPredicted RBP8.88□□□□□ -0.99
CDRT1-207ENST00000583965 AKR1C8PQ5T2L2 129 aa8.88□□□□□ -0.99
CDRT1-207ENST00000583965 WFDC9Q8NEX5 89 aa8.88□□□□□ -0.99
CDRT1-207ENST00000583965 OR1L4Q8NGR5 311 aa8.88□□□□□ -0.99
CDRT1-207ENST00000583965 PFDN5Q99471 154 aa8.88□□□□□ -0.99
CDRT1-207ENST00000583965 MCRIP2Q9BUT9 160 aaKnown RBP8.88□□□□□ -0.99
CDRT1-207ENST00000583965 PBDC1Q9BVG4 233 aa8.88□□□□□ -0.99
CDRT1-207ENST00000583965 MRPL27Q9P0M9 148 aaKnown RBP8.88□□□□□ -0.99
CDRT1-207ENST00000583965 RNF24Q9Y225 148 aa8.88□□□□□ -0.99
CDRT1-207ENST00000583965 IGHV3OR16-8A0A075B7F1 116 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 IGHV7-4-1A0A0J9YVY3 117 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 A0A1W2PS18 150 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 RAB19A4D1S5 217 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 COX7A2P2O60397 106 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 ORM2P19652 201 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 TM4SF20Q53R12 229 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 TMEM41BQ5BJD5 291 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 FFAR4Q5NUL3 377 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 IL34Q6ZMJ4 242 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 COMMD7Q86VX2 200 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 OR1B1Q8NGR6 318 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 GATAD1Q8WUU5 269 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 RNF2Q99496 336 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 TMEM231Q9H6L2 316 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 DNAJC4Q9NNZ3 241 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 SMPXQ9UHP9 88 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 HIGD1AQ9Y241 93 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 RFNGQ9Y644 331 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 U3KQE9 123 aa8.87□□□□□ -0.99
CDRT1-207ENST00000583965 TRAV1-1A0A0B4J248 108 aa8.86□□□□□ -0.99
CDRT1-207ENST00000583965 ZNF207O43670 478 aaKnown RBP8.86□□□□□ -0.99
CDRT1-207ENST00000583965 CSN3P07498 182 aa8.86□□□□□ -0.99
CDRT1-207ENST00000583965 OR5G3P0C626 314 aa8.86□□□□□ -0.99
CDRT1-207ENST00000583965 FOLR2P14207 255 aa8.86□□□□□ -0.99
CDRT1-207ENST00000583965 S100A1P23297 94 aa8.86□□□□□ -0.99
CDRT1-207ENST00000583965 CBLN1P23435 193 aa8.86□□□□□ -0.99
CDRT1-207ENST00000583965 INSL3P51460 131 aa8.86□□□□□ -0.99
CDRT1-207ENST00000583965 ACOT6Q3I5F7 207 aaPredicted RBP8.86□□□□□ -0.99
CDRT1-207ENST00000583965 PRR31Q5SQ13 230 aa8.86□□□□□ -0.99
CDRT1-207ENST00000583965 C10orf113Q5VZT2 155 aa8.86□□□□□ -0.99
CDRT1-207ENST00000583965 GRAMD2BQ96HH9 432 aa8.86□□□□□ -0.99
CDRT1-207ENST00000583965 GPR61Q9BZJ8 451 aa8.86□□□□□ -0.99
CDRT1-207ENST00000583965 SEC14L6B5MCN3 397 aa8.85□□□□□ -0.99
CDRT1-207ENST00000583965 CD5P06127 495 aa8.85□□□□□ -0.99
CDRT1-207ENST00000583965 M6PRP20645 277 aa8.85□□□□□ -0.99
CDRT1-207ENST00000583965 C1orf194Q5T5A4 169 aa8.85□□□□□ -0.99
CDRT1-207ENST00000583965 C9orf66Q5T8R8 295 aa8.85□□□□□ -0.99
CDRT1-207ENST00000583965 PATE2Q6UY27 113 aa8.85□□□□□ -0.99
CDRT1-207ENST00000583965 FAM213BQ8TBF2 198 aa8.85□□□□□ -0.99
CDRT1-207ENST00000583965 MBD3L1Q8WWY6 194 aa8.85□□□□□ -0.99
CDRT1-207ENST00000583965 TMEM37Q8WXS4 190 aa8.85□□□□□ -0.99
CDRT1-207ENST00000583965 SLC25A39Q9BZJ4 359 aaPredicted RBP8.85□□□□□ -0.99
CDRT1-207ENST00000583965 VSIRQ9H7M9 311 aa8.85□□□□□ -0.99
CDRT1-207ENST00000583965 RPRMQ9NS64 109 aa8.85□□□□□ -0.99
CDRT1-207ENST00000583965 TECRQ9NZ01 308 aaKnown RBP8.85□□□□□ -0.99
CDRT1-207ENST00000583965 DOK5Q9P104 306 aa8.85□□□□□ -0.99
CDRT1-207ENST00000583965 ZNF98A6NK75 572 aa8.84□□□□□ -0.99
CDRT1-207ENST00000583965 H3BRN7 92 aa8.84□□□□□ -0.99
CDRT1-207ENST00000583965 CHEK1O14757 476 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms