RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 COMMD5Q9GZQ3 224 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 WDR61Q9GZS3 305 aaKnown RBP3.49□□□□□ -1.85
SS18-223ENST00000583595 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.49□□□□□ -1.85
SS18-223ENST00000583595 DEC1Q9P2X7 70 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 NAT8BQ9UHF3 227 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 MCTS1Q9ULC4 181 aaKnown RBP3.49□□□□□ -1.85
SS18-223ENST00000583595 IER3IP1Q9Y5U9 82 aa3.49□□□□□ -1.85
SS18-223ENST00000583595 NUP205Q92621 2012 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 HTTP42858 3142 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 IGLV3-10A0A075B6K4 115 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 LOC102725191A0A1B0GVB3 256 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 GRIFINA4D1Z8 144 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 CRYM-AS1A6NIL9 109 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 H0Y9J4 135 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 H7C1C5 153 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 J3QLI3 93 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 ZNF737O75373 536 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 BGLAPP02818 100 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 MT-ND6P03923 174 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 NPY1RP25929 384 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 PSMB3P49720 205 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 TCL1AP56279 114 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 IGFBP7Q16270 282 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 TMEM97Q5BJF2 176 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 C9orf129Q5T035 196 aaKnown RBP3.48□□□□□ -1.85
SS18-223ENST00000583595 FAM162BQ5T6X4 162 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 NPBQ8NG41 125 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 OR51T1Q8NGJ9 327 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 OR10AG1Q8NH19 301 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 OR4A5Q8NH83 315 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 OR5P3Q8WZ94 311 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 RERGQ96A58 199 aaPredicted RBP3.48□□□□□ -1.85
SS18-223ENST00000583595 WDR34Q96EX3 536 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 PRSS27Q9BQR3 290 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 FAM103A1Q9BTL3 118 aaKnown RBP3.48□□□□□ -1.85
SS18-223ENST00000583595 MS4A6AQ9H2W1 248 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 TXNIPQ9H3M7 391 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 ZNF442Q9H7R0 627 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 VPREB3Q9UKI3 123 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 HS3ST2Q9Y278 367 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 MED31Q9Y3C7 131 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 MCM3APO60318 1980 aa3.48□□□□□ -1.85
SS18-223ENST00000583595 MGAMO43451 1857 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 KIAA0100Q14667 2235 aaKnown RBP3.47□□□□□ -1.85
SS18-223ENST00000583595 HELZP42694 1942 aaKnown RBP3.47□□□□□ -1.85
SS18-223ENST00000583595 IGHV3OR16-9A0A0B4J2B5 98 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 MDFIC2A0A1B0GVS7 189 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 A0A1B0GX12 115 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 FAM168BA1KXE4 195 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 PLAC8L1A1L4L8 177 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 CD300LBA8K4G0 201 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 F8W1H4 67 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 H0Y980 276 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 J3QT63 122 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 DEGS1O15121 323 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 NDUFB2O95178 105 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 IGLV2-23P01705 113 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 GYPBP06028 91 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 ZNF883P0CG24 379 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 FABP2P12104 132 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 CRYBB3P26998 211 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 GRB2P62993 217 aaKnown RBP3.47□□□□□ -1.85
SS18-223ENST00000583595 GNG3P63215 75 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 KIR2DS1Q14954 304 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 CLEC12BQ2HXU8 276 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 LRRC75BQ2VPJ9 315 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 C15orf32Q32M92 178 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 GLYATL3Q5SZD4 288 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 SPATA31B1PQ5VZV4 182 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 C2orf73Q8N5S3 287 aaPredicted RBP3.47□□□□□ -1.85
SS18-223ENST00000583595 CD177Q8N6Q3 437 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 C14orf178Q8N769 122 aaPredicted RBP3.47□□□□□ -1.85
SS18-223ENST00000583595 OR8B3Q8NGG8 313 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 OR51A4Q8NGJ6 313 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 OR5D14Q8NGL3 314 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 OR10D3Q8NH80 312 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 PFN4Q8NHR9 129 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 RTN4IP1Q8WWV3 396 aaPredicted RBP3.47□□□□□ -1.85
SS18-223ENST00000583595 PP6455Q8WZ26 134 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 TMEM101Q96IK0 257 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 FAM19A4Q96LR4 140 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 OR8B2Q96RD0 313 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 GPER1Q99527 375 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 SPIN2AQ99865 258 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 SPIN2BQ9BPZ2 258 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 ANAPC13Q9BS18 74 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 NDFIP1Q9BT67 221 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 GGTLC1Q9BX51 225 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 SLC25A2Q9BXI2 301 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 GNB1LQ9BYB4 327 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 C11orf1Q9H5F2 150 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 PRORYQ9H606 182 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 PDFQ9HBH1 243 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 ZNF443Q9Y2A4 671 aaPredicted RBP3.47□□□□□ -1.85
SS18-223ENST00000583595 SIGLEC9Q9Y336 463 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 SPCS1Q9Y6A9 102 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 TMEM14AQ9Y6G1 99 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 TRIOBPQ9H2D6 2365 aa3.47□□□□□ -1.85
SS18-223ENST00000583595 NUP214P35658 2090 aaPredicted RBP3.47□□□□□ -1.85
SS18-223ENST00000583595 LCTP09848 1927 aa3.46□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms