RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 A0A0G2JNJ9 132 aa13.42□□□□□ -0.26
ERBB2-214ENST00000583038 ZNF138P52744 262 aa13.42□□□□□ -0.26
ERBB2-214ENST00000583038 Q9UFV3 132 aa13.42□□□□□ -0.26
ERBB2-214ENST00000583038 C5orf63A6NC05 138 aa13.41□□□□□ -0.26
ERBB2-214ENST00000583038 LY6DQ14210 128 aa13.41□□□□□ -0.26
ERBB2-214ENST00000583038 ZNF585BQ52M93 769 aa13.41□□□□□ -0.26
ERBB2-214ENST00000583038 ST6GALNAC3Q8NDV1 305 aa13.41□□□□□ -0.26
ERBB2-214ENST00000583038 IGKV1D-17A0A075B6S4 117 aa13.41□□□□□ -0.26
ERBB2-214ENST00000583038 TYMSP04818 313 aa13.41□□□□□ -0.26
ERBB2-214ENST00000583038 SEC11AP67812 179 aa13.41□□□□□ -0.26
ERBB2-214ENST00000583038 HIST3H2BBQ8N257 126 aa13.41□□□□□ -0.26
ERBB2-214ENST00000583038 LINC00473A8K010 186 aa13.41□□□□□ -0.26
ERBB2-214ENST00000583038 BUB1B-PAK6H3BSN5 160 aa13.41□□□□□ -0.26
ERBB2-214ENST00000583038 LINC00477Q96M19 166 aa13.41□□□□□ -0.26
ERBB2-214ENST00000583038 LRRK1Q38SD2 2015 aa13.41□□□□□ -0.26
ERBB2-214ENST00000583038 A0A1W2PRX2 142 aa13.41□□□□□ -0.26
ERBB2-214ENST00000583038 IGKCP01834 107 aa13.41□□□□□ -0.26
ERBB2-214ENST00000583038 DTX2Q86UW9 622 aa13.4□□□□□ -0.26
ERBB2-214ENST00000583038 OR9G4Q8NGQ1 327 aa13.4□□□□□ -0.26
ERBB2-214ENST00000583038 SCRT1Q9BWW7 348 aa13.4□□□□□ -0.26
ERBB2-214ENST00000583038 TRGV4A0A0C4DH28 118 aa13.4□□□□□ -0.26
ERBB2-214ENST00000583038 KIR3DL3Q8N743 410 aa13.4□□□□□ -0.26
ERBB2-214ENST00000583038 NCOR1P1Q9H4R4 102 aa13.4□□□□□ -0.26
ERBB2-214ENST00000583038 RFNGQ9Y644 331 aa13.4□□□□□ -0.26
ERBB2-214ENST00000583038 TSPAN13O95857 204 aa13.4□□□□□ -0.26
ERBB2-214ENST00000583038 CHTOPQ9Y3Y2 248 aaKnown RBP13.4□□□□□ -0.26
ERBB2-214ENST00000583038 CLDN16Q9Y5I7 305 aa13.4□□□□□ -0.26
ERBB2-214ENST00000583038 C15orf62A8K5M9 175 aa13.39□□□□□ -0.27
ERBB2-214ENST00000583038 FHL1Q13642 323 aa13.39□□□□□ -0.27
ERBB2-214ENST00000583038 SPATA31B1PQ5VZV4 182 aa13.39□□□□□ -0.27
ERBB2-214ENST00000583038 C10orf126Q8N4M7 172 aa13.39□□□□□ -0.27
ERBB2-214ENST00000583038 ORAOV1Q8WV07 137 aa13.39□□□□□ -0.27
ERBB2-214ENST00000583038 NHP2Q9NX24 153 aaKnown RBP13.39□□□□□ -0.27
ERBB2-214ENST00000583038 CA1P00915 261 aaPredicted RBP13.39□□□□□ -0.27
ERBB2-214ENST00000583038 CXCL1P09341 107 aa13.39□□□□□ -0.27
ERBB2-214ENST00000583038 CD28P10747 220 aa13.39□□□□□ -0.27
ERBB2-214ENST00000583038 PRTN3P24158 256 aa13.39□□□□□ -0.27
ERBB2-214ENST00000583038 HSD52Q0P140 79 aa13.39□□□□□ -0.27
ERBB2-214ENST00000583038 C3orf36Q3SXR2 165 aa13.39□□□□□ -0.27
ERBB2-214ENST00000583038 DMRTA1Q5VZB9 504 aa13.39□□□□□ -0.27
ERBB2-214ENST00000583038 OR5A1Q8NGJ0 315 aa13.39□□□□□ -0.27
ERBB2-214ENST00000583038 TRAV3A0A0B4J244 114 aa13.38□□□□□ -0.27
ERBB2-214ENST00000583038 LINC00587B1AMM8 73 aa13.38□□□□□ -0.27
ERBB2-214ENST00000583038 H3BUT2 72 aa13.38□□□□□ -0.27
ERBB2-214ENST00000583038 TNFSF13O75888 250 aa13.38□□□□□ -0.27
ERBB2-214ENST00000583038 NTF4P34130 210 aa13.38□□□□□ -0.27
ERBB2-214ENST00000583038 MPDZO75970 2070 aa13.38□□□□□ -0.27
ERBB2-214ENST00000583038 SIP14410 1827 aa13.38□□□□□ -0.27
ERBB2-214ENST00000583038 PPIFP30405 207 aaKnown RBP13.38□□□□□ -0.27
ERBB2-214ENST00000583038 LAGE3Q14657 143 aa13.38□□□□□ -0.27
ERBB2-214ENST00000583038 KIAA2026Q5HYC2 2103 aa13.38□□□□□ -0.27
ERBB2-214ENST00000583038 ZNF474Q6S9Z5 364 aaPredicted RBP13.38□□□□□ -0.27
ERBB2-214ENST00000583038 LILRA1O75019 489 aa13.38□□□□□ -0.27
ERBB2-214ENST00000583038 AMBPP02760 352 aa13.38□□□□□ -0.27
ERBB2-214ENST00000583038 NOTCH3Q9UM47 2321 aa13.38□□□□□ -0.27
ERBB2-214ENST00000583038 A0A1B0GV72 72 aa13.38□□□□□ -0.27
ERBB2-214ENST00000583038 ERVK11-1P61568 191 aa13.38□□□□□ -0.27
ERBB2-214ENST00000583038 RNASE2P10153 161 aaKnown RBP13.37□□□□□ -0.27
ERBB2-214ENST00000583038 HTN3P15516 51 aa13.37□□□□□ -0.27
ERBB2-214ENST00000583038 LMO1P25800 156 aa13.37□□□□□ -0.27
ERBB2-214ENST00000583038 REG4Q9BYZ8 158 aa13.37□□□□□ -0.27
ERBB2-214ENST00000583038 SBF1O95248 1867 aa13.37□□□□□ -0.27
ERBB2-214ENST00000583038 SLC25A20O43772 301 aa13.37□□□□□ -0.27
ERBB2-214ENST00000583038 MALP21145 153 aa13.37□□□□□ -0.27
ERBB2-214ENST00000583038 PDE6HQ13956 83 aa13.37□□□□□ -0.27
ERBB2-214ENST00000583038 MORN3Q6PF18 240 aaPredicted RBP13.37□□□□□ -0.27
ERBB2-214ENST00000583038 EXOC3-AS1Q8N2X6 119 aa13.37□□□□□ -0.27
ERBB2-214ENST00000583038 SLC25A16P16260 332 aa13.37□□□□□ -0.27
ERBB2-214ENST00000583038 MRPL27Q9P0M9 148 aaKnown RBP13.37□□□□□ -0.27
ERBB2-214ENST00000583038 TP53BP1Q12888 1972 aaPredicted RBP13.37□□□□□ -0.27
ERBB2-214ENST00000583038 FAM223BA6NKX1 122 aa13.37□□□□□ -0.27
ERBB2-214ENST00000583038 TOMM40O96008 361 aa13.37□□□□□ -0.27
ERBB2-214ENST00000583038 PCP4P48539 62 aa13.37□□□□□ -0.27
ERBB2-214ENST00000583038 HGFACQ04756 655 aa13.37□□□□□ -0.27
ERBB2-214ENST00000583038 FAM223AQ8IWN6 122 aa13.37□□□□□ -0.27
ERBB2-214ENST00000583038 ZNF815PA8K554 130 aa13.36□□□□□ -0.27
ERBB2-214ENST00000583038 H3BUX3 64 aa13.36□□□□□ -0.27
ERBB2-214ENST00000583038 GLRX5Q86SX6 157 aa13.36□□□□□ -0.27
ERBB2-214ENST00000583038 GTSCR1Q86UQ5 136 aa13.36□□□□□ -0.27
ERBB2-214ENST00000583038 IGKV2-40A0A087WW87 121 aaPredicted RBP13.36□□□□□ -0.27
ERBB2-214ENST00000583038 IGKV2D-40P01614 121 aaPredicted RBP13.36□□□□□ -0.27
ERBB2-214ENST00000583038 DTX1Q86Y01 620 aa13.36□□□□□ -0.27
ERBB2-214ENST00000583038 RNF144BQ7Z419 303 aa13.36□□□□□ -0.27
ERBB2-214ENST00000583038 RPL15P61313 204 aaKnown RBP13.36□□□□□ -0.27
ERBB2-214ENST00000583038 LINC00527Q9UJ94 153 aa13.36□□□□□ -0.27
ERBB2-214ENST00000583038 RPRMLQ8N4K4 120 aa13.35□□□□□ -0.27
ERBB2-214ENST00000583038 TMEM86BQ8N661 226 aa13.35□□□□□ -0.27
ERBB2-214ENST00000583038 DPH3P1Q9H4G8 78 aa13.35□□□□□ -0.27
ERBB2-214ENST00000583038 PSG3Q16557 428 aa13.35□□□□□ -0.27
ERBB2-214ENST00000583038 HOXA3O43365 443 aaPredicted RBP13.35□□□□□ -0.27
ERBB2-214ENST00000583038 KLRD1Q13241 179 aa13.35□□□□□ -0.27
ERBB2-214ENST00000583038 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.35□□□□□ -0.275e-7■■□□□ 13.7
ERBB2-214ENST00000583038 USF3Q68DE3 2245 aa13.35□□□□□ -0.27
ERBB2-214ENST00000583038 NDUFS8O00217 210 aa13.35□□□□□ -0.27
ERBB2-214ENST00000583038 CD33P20138 364 aa13.35□□□□□ -0.27
ERBB2-214ENST00000583038 LYZL1Q6UWQ5 148 aa13.35□□□□□ -0.27
ERBB2-214ENST00000583038 GATA4P43694 442 aa13.34□□□□□ -0.27
ERBB2-214ENST00000583038 BEND2Q8NDZ0 799 aa13.34□□□□□ -0.27
ERBB2-214ENST00000583038 GZMBP10144 247 aa13.34□□□□□ -0.27
ERBB2-214ENST00000583038 EVI2AP22794 236 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms