RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 THYN1Q9P016 225 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 PRELID3BQ9Y3B1 194 aa5.51□□□□□ -1.53
CCDC47-205ENST00000582331 LSM5Q9Y4Y9 91 aaKnown RBP5.51□□□□□ -1.53
CCDC47-205ENST00000582331 IGKV3-7A0A075B6H7 116 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 OR2T8A6NH00 312 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 C15orf61A6NNL5 157 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 E5RGE8 158 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 NDUFA4O00483 81 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 TAAR5O14804 337 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 ST8SIA3O43173 380 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 PITX3O75364 302 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 IFNA17P01571 189 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 IGKV1-39P01597 117 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 IGKV1D-39P04432 117 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 TPT1P13693 172 aaKnown RBP5.5□□□□□ -1.53
CCDC47-205ENST00000582331 MIFP14174 115 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 P2RY1P47900 373 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 EIF4EBP1Q13541 118 aaPredicted RBP5.5□□□□□ -1.53
CCDC47-205ENST00000582331 SMCO1Q147U7 214 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 MSMO1Q15800 293 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 C1orf134Q5TEV5 83 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 HSD17B13Q7Z5P4 300 aaPredicted RBP5.5□□□□□ -1.53
CCDC47-205ENST00000582331 UBE2DNLQ8IWF7 75 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 BAP18Q8IXM2 172 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 CMTM1Q8IZ96 169 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 PUSL1Q8N0Z8 303 aaKnown RBP5.5□□□□□ -1.53
CCDC47-205ENST00000582331 EIF4E3Q8N5X7 224 aaKnown RBP5.5□□□□□ -1.53
CCDC47-205ENST00000582331 VN1R17PQ8TDU5 208 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 RBPMSQ93062 196 aaKnown RBP5.5□□□□□ -1.53
CCDC47-205ENST00000582331 RNF2Q99496 336 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 ARV1Q9H2C2 271 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 PLEKHA2Q9HB19 425 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 WFDC1Q9HC57 220 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 SMPXQ9UHP9 88 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 RCL1Q9Y2P8 373 aaKnown RBP5.5□□□□□ -1.53
CCDC47-205ENST00000582331 NSG2Q9Y328 171 aa5.5□□□□□ -1.53
CCDC47-205ENST00000582331 LRP1BQ9NZR2 4599 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 IGHV3OR16-8A0A075B7F1 116 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 A0A0G2JRQ6 117 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 CGB1A6NKQ9 187 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 C15orf62A8K5M9 175 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 CHEK1O14757 476 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 CYB5BO43169 146 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 TNFSF12O43508 249 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 SCGB1D2O95969 90 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 HRASP01112 189 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 FGF2P09038 288 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 SLC25A6P12236 298 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 RPL30P62888 115 aaKnown RBP5.49□□□□□ -1.53
CCDC47-205ENST00000582331 RPL8P62917 257 aaKnown RBP5.49□□□□□ -1.53
CCDC47-205ENST00000582331 PAFAH1B2P68402 229 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 TOR2AQ5JU69 321 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 RPL7L1Q6DKI1 246 aaKnown RBP5.49□□□□□ -1.53
CCDC47-205ENST00000582331 SPSB3Q6PJ21 355 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 Q6ZRM9 215 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 GBGT1Q8N5D6 347 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 TMEM116Q8NCL8 245 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 ZBTB34Q8NCN2 500 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 OR4S2Q8NH73 311 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 GPR146Q96CH1 333 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 RHPN1-AS1Q9BWJ2 59 aa5.49□□□□□ -1.53
CCDC47-205ENST00000582331 IGHV7-4-1A0A0J9YVY3 117 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 A0A1B0GU03 582 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 ZNF705EA8MWA4 302 aaPredicted RBP5.48□□□□□ -1.53
CCDC47-205ENST00000582331 DFFBO76075 338 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 TMEM50AO95807 157 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 IGKV1-5P01602 117 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 NPY1RP25929 384 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 S100GP29377 79 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 NKX2-1P43699 371 aaPredicted RBP5.48□□□□□ -1.53
CCDC47-205ENST00000582331 PAX9P55771 341 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 BRWD1-AS2P59051 145 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 DEFB131AP59861 70 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 OR2B8PP59922 312 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 POLR2GP62487 172 aaKnown RBP eCLIP5.48□□□□□ -1.53
CCDC47-205ENST00000582331 EIF5AP63241 154 aaKnown RBP5.48□□□□□ -1.53
CCDC47-205ENST00000582331 C12orf74Q32Q52 190 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 TMEM41BQ5BJD5 291 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 FAM90A2PQ658T7 463 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 LEMD1Q68G75 181 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 SLC25A24Q6NUK1 477 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 STHQ8IWL8 128 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 OR51H1Q8NH63 302 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 TCTEX1D2Q8WW35 142 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 TMED6Q8WW62 240 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 LSM10Q969L4 123 aaKnown RBP5.48□□□□□ -1.53
CCDC47-205ENST00000582331 ATP6V0BQ99437 205 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 HSD17B10Q99714 261 aaKnown RBP5.48□□□□□ -1.53
CCDC47-205ENST00000582331 SRSF8Q9BRL6 282 aaKnown RBP5.48□□□□□ -1.53
CCDC47-205ENST00000582331 PFDN2Q9UHV9 154 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 X6R8D5 127 aa5.48□□□□□ -1.53
CCDC47-205ENST00000582331 APOBP04114 4563 aaKnown RBP5.47□□□□□ -1.53
CCDC47-205ENST00000582331 IGHV3-49A0A0A0MS15 119 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 PIGBOS1A0A0B4J2F0 54 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 IGLC7A0M8Q6 106 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 IGSF23A1L1A6 192 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 FAM24AA6NFZ4 105 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 TEX46H3BTG2 121 aa5.47□□□□□ -1.53
CCDC47-205ENST00000582331 DNASE2O00115 360 aaPredicted RBP5.47□□□□□ -1.53
CCDC47-205ENST00000582331 SERPINE2P07093 398 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms