RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 H0YIZ8 118 aa9.31□□□□□ -0.92
SNORD55-201ENST00000581525 GATA2P23769 480 aaPredicted RBP9.31□□□□□ -0.92
SNORD55-201ENST00000581525 S100A11P31949 105 aa9.31□□□□□ -0.92
SNORD55-201ENST00000581525 TFPI2P48307 235 aa9.31□□□□□ -0.92
SNORD55-201ENST00000581525 SULT1A1P50225 295 aa9.31□□□□□ -0.92
SNORD55-201ENST00000581525 AKR1C1Q04828 323 aa9.31□□□□□ -0.92
SNORD55-201ENST00000581525 OR2F1Q13607 317 aa9.31□□□□□ -0.92
SNORD55-201ENST00000581525 PXDC1Q5TGL8 231 aa9.31□□□□□ -0.92
SNORD55-201ENST00000581525 APRG1Q8IVJ8 170 aa9.31□□□□□ -0.92
SNORD55-201ENST00000581525 C17orf77Q96MU5 243 aa9.31□□□□□ -0.92
SNORD55-201ENST00000581525 OVOL2Q9BRP0 275 aa9.31□□□□□ -0.92
SNORD55-201ENST00000581525 PBDC1Q9BVG4 233 aa9.31□□□□□ -0.92
SNORD55-201ENST00000581525 MGAT4CQ9UBM8 478 aa9.31□□□□□ -0.92
SNORD55-201ENST00000581525 IGKV3-7A0A075B6H7 116 aa9.3□□□□□ -0.92
SNORD55-201ENST00000581525 ZNF98A6NK75 572 aa9.3□□□□□ -0.92
SNORD55-201ENST00000581525 SOCS3O14543 225 aa9.3□□□□□ -0.92
SNORD55-201ENST00000581525 GOSR2O14653 212 aa9.3□□□□□ -0.92
SNORD55-201ENST00000581525 SIX6O95475 246 aa9.3□□□□□ -0.92
SNORD55-201ENST00000581525 APOC4P55056 127 aa9.3□□□□□ -0.92
SNORD55-201ENST00000581525 DEFB131AP59861 70 aa9.3□□□□□ -0.92
SNORD55-201ENST00000581525 LYZP61626 148 aa9.3□□□□□ -0.92
SNORD55-201ENST00000581525 RRAS2P62070 204 aaPredicted RBP9.3□□□□□ -0.92
SNORD55-201ENST00000581525 RPL11P62913 178 aaKnown RBP9.3□□□□□ -0.92
SNORD55-201ENST00000581525 ZNF124Q15973 351 aa9.3□□□□□ -0.92
SNORD55-201ENST00000581525 ATP6V1FQ16864 119 aa9.3□□□□□ -0.92
SNORD55-201ENST00000581525 PATE2Q6UY27 113 aa9.3□□□□□ -0.92
SNORD55-201ENST00000581525 STXBP6Q8NFX7 210 aa9.3□□□□□ -0.92
SNORD55-201ENST00000581525 RNF126Q9BV68 326 aa9.3□□□□□ -0.92
SNORD55-201ENST00000581525 KMT2CQ8NEZ4 4911 aaKnown RBP9.29□□□□□ -0.92
SNORD55-201ENST00000581525 IGSF23A1L1A6 192 aa9.29□□□□□ -0.92
SNORD55-201ENST00000581525 E5RGE8 158 aa9.29□□□□□ -0.92
SNORD55-201ENST00000581525 H3BRN7 92 aa9.29□□□□□ -0.92
SNORD55-201ENST00000581525 AGPAT2O15120 278 aa9.29□□□□□ -0.92
SNORD55-201ENST00000581525 RLN2P04090 185 aa9.29□□□□□ -0.92
SNORD55-201ENST00000581525 LINC00869P0C866 280 aa9.29□□□□□ -0.92
SNORD55-201ENST00000581525 S100A7P31151 101 aa9.29□□□□□ -0.92
SNORD55-201ENST00000581525 CAV2P51636 162 aa9.29□□□□□ -0.92
SNORD55-201ENST00000581525 SLC38A11Q08AI6 406 aa9.29□□□□□ -0.92
SNORD55-201ENST00000581525 GPR82Q96P67 336 aa9.29□□□□□ -0.92
SNORD55-201ENST00000581525 CSTL1Q9H114 145 aa9.29□□□□□ -0.92
SNORD55-201ENST00000581525 WDR83OSQ9Y284 106 aa9.29□□□□□ -0.92
SNORD55-201ENST00000581525 CSMD3Q7Z407 3707 aa9.29□□□□□ -0.92
SNORD55-201ENST00000581525 SMCO3A2RU48 225 aa9.28□□□□□ -0.92
SNORD55-201ENST00000581525 CST7O76096 145 aa9.28□□□□□ -0.92
SNORD55-201ENST00000581525 ORM2P19652 201 aa9.28□□□□□ -0.92
SNORD55-201ENST00000581525 BCAP31P51572 246 aa9.28□□□□□ -0.92
SNORD55-201ENST00000581525 PRR20EP86478 221 aa9.28□□□□□ -0.92
SNORD55-201ENST00000581525 PRR20CP86479 221 aa9.28□□□□□ -0.92
SNORD55-201ENST00000581525 PRR20DP86480 221 aa9.28□□□□□ -0.92
SNORD55-201ENST00000581525 PRR20BP86481 221 aa9.28□□□□□ -0.92
SNORD55-201ENST00000581525 PRR20AP86496 221 aa9.28□□□□□ -0.92
SNORD55-201ENST00000581525 TRPT1Q86TN4 253 aaKnown RBP9.28□□□□□ -0.92
SNORD55-201ENST00000581525 ZNF546Q86UE3 836 aa9.28□□□□□ -0.92
SNORD55-201ENST00000581525 PPP1R1CQ8WVI7 109 aa9.28□□□□□ -0.92
SNORD55-201ENST00000581525 RNF183Q96D59 192 aa9.28□□□□□ -0.92
SNORD55-201ENST00000581525 CLUHP3Q96NS8 147 aa9.28□□□□□ -0.92
SNORD55-201ENST00000581525 MGST2Q99735 147 aa9.28□□□□□ -0.92
SNORD55-201ENST00000581525 SHANK2-AS3Q9BTD1 123 aa9.28□□□□□ -0.92
SNORD55-201ENST00000581525 SLC25A39Q9BZJ4 359 aaPredicted RBP9.28□□□□□ -0.92
SNORD55-201ENST00000581525 OR5AC2Q9NZP5 309 aa9.28□□□□□ -0.92
SNORD55-201ENST00000581525 C3orf84H3BNL1 204 aa9.27□□□□□ -0.93
SNORD55-201ENST00000581525 HYPMO75409 117 aa9.27□□□□□ -0.93
SNORD55-201ENST00000581525 LYL1P12980 280 aa9.27□□□□□ -0.93
SNORD55-201ENST00000581525 RPL29P47914 159 aaKnown RBP9.27□□□□□ -0.93
SNORD55-201ENST00000581525 MEOX2P50222 304 aa9.27□□□□□ -0.93
SNORD55-201ENST00000581525 S100A10P60903 97 aa9.27□□□□□ -0.93
SNORD55-201ENST00000581525 HBG1P69891 147 aa9.27□□□□□ -0.93
SNORD55-201ENST00000581525 HBG2P69892 147 aa9.27□□□□□ -0.93
SNORD55-201ENST00000581525 SAMD13Q5VXD3 122 aa9.27□□□□□ -0.93
SNORD55-201ENST00000581525 S100A7AQ86SG5 101 aa9.27□□□□□ -0.93
SNORD55-201ENST00000581525 OR8I2Q8N0Y5 310 aa9.27□□□□□ -0.93
SNORD55-201ENST00000581525 OR1B1Q8NGR6 318 aa9.27□□□□□ -0.93
SNORD55-201ENST00000581525 TMEM147Q9BVK8 224 aa9.27□□□□□ -0.93
SNORD55-201ENST00000581525 SLC25A31Q9H0C2 315 aa9.27□□□□□ -0.93
SNORD55-201ENST00000581525 UQCC1Q9NVA1 299 aa9.27□□□□□ -0.93
SNORD55-201ENST00000581525 RNF24Q9Y225 148 aa9.27□□□□□ -0.93
SNORD55-201ENST00000581525 HIGD1AQ9Y241 93 aa9.27□□□□□ -0.93
SNORD55-201ENST00000581525 ALG5Q9Y673 324 aa9.27□□□□□ -0.93
SNORD55-201ENST00000581525 ELOA3CA0A087WX78 387 aaPredicted RBP9.26□□□□□ -0.93
SNORD55-201ENST00000581525 ISLRO14498 428 aa9.26□□□□□ -0.93
SNORD55-201ENST00000581525 MRPS12O15235 138 aaKnown RBP9.26□□□□□ -0.93
SNORD55-201ENST00000581525 SPRY2O43597 315 aa9.26□□□□□ -0.93
SNORD55-201ENST00000581525 SSNA1O43805 119 aa9.26□□□□□ -0.93
SNORD55-201ENST00000581525 MPC2O95563 127 aa9.26□□□□□ -0.93
SNORD55-201ENST00000581525 GIG44P09565 113 aaPredicted RBP9.26□□□□□ -0.93
SNORD55-201ENST00000581525 ZNF688P0C7X2 276 aa9.26□□□□□ -0.93
SNORD55-201ENST00000581525 PSMB3P49720 205 aa9.26□□□□□ -0.93
SNORD55-201ENST00000581525 SNRPD3P62318 126 aaKnown RBP9.26□□□□□ -0.93
SNORD55-201ENST00000581525 NHLH2Q02577 135 aa9.26□□□□□ -0.93
SNORD55-201ENST00000581525 BAXQ07812 192 aa9.26□□□□□ -0.93
SNORD55-201ENST00000581525 STX12Q86Y82 276 aa9.26□□□□□ -0.93
SNORD55-201ENST00000581525 TMEM217Q8N7C4 229 aa9.26□□□□□ -0.93
SNORD55-201ENST00000581525 GATAD1Q8WUU5 269 aa9.26□□□□□ -0.93
SNORD55-201ENST00000581525 TMEM37Q8WXS4 190 aa9.26□□□□□ -0.93
SNORD55-201ENST00000581525 SLC25A32Q9H2D1 315 aa9.26□□□□□ -0.93
SNORD55-201ENST00000581525 RETNQ9HD89 108 aa9.26□□□□□ -0.93
SNORD55-201ENST00000581525 STARD9Q9P2P6 4700 aa9.26□□□□□ -0.93
SNORD55-201ENST00000581525 A0A087X0K7 114 aa9.25□□□□□ -0.93
SNORD55-201ENST00000581525 MPDU1O75352 247 aa9.25□□□□□ -0.93
SNORD55-201ENST00000581525 RPL35AP18077 110 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms