RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 DOK5Q9P104 306 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 LINC00527Q9UJ94 153 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 CARHSP1Q9Y2V2 147 aaKnown RBP4.85□□□□□ -1.63
PTPRM-213ENST00000580949 ACANP16112 2415 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 TLN2Q9Y4G6 2542 aa4.85□□□□□ -1.63
PTPRM-213ENST00000580949 NBPF19A0A087WUL8 3843 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 TRBV9A0A0B4J1U6 114 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 TRAV41A0A0B4J266 112 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 A0A1W2PPV4 95 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 F5H697 171 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 CLN5O75503 358 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 IGHV3-23P01764 117 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 IGHG2P01859 326 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 APOC3P02656 99 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 OR5G3P0C626 314 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 STAG3L2P0CL84 134 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 STAG3L3P0CL85 134 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 ARL14EPLP0DKL9 152 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 BCL2P10415 239 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 PSG1P11464 419 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 PPT1P50897 306 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 SELENOTP62341 195 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 RHOBP62745 196 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 RHOGP84095 191 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 ECSCRQ19T08 205 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 KHDC3LQ587J8 217 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 C9orf152Q5JTZ5 239 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 IL17RELQ6ZVW7 336 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 SLC35E3Q7Z769 313 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 NOL4LQ96MY1 436 aaPredicted RBP4.84□□□□□ -1.63
PTPRM-213ENST00000580949 PBDC1Q9BVG4 233 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 SEC11CQ9BY50 192 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 SLC35B3Q9H1N7 401 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 DNAJC4Q9NNZ3 241 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 FUT9Q9Y231 359 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 CSMD1Q96PZ7 3565 aa4.84□□□□□ -1.63
PTPRM-213ENST00000580949 FLNAP21333 2647 aaKnown RBP4.84□□□□□ -1.63
PTPRM-213ENST00000580949 SONP18583 2426 aaKnown RBP4.83□□□□□ -1.64
PTPRM-213ENST00000580949 F8W036 122 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 M0QZK8 103 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 PAGE4O60829 102 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 CXorf1O96002 111 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 HSPB1P04792 205 aaKnown RBP4.83□□□□□ -1.64
PTPRM-213ENST00000580949 IGF1P05019 195 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 CTSGP08311 255 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 RD3LP0DJH9 198 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 HIST1H1BP16401 226 aaKnown RBP4.83□□□□□ -1.64
PTPRM-213ENST00000580949 ORM2P19652 201 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 NPPCP23582 126 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 GCHFRP30047 84 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 PPIFP30405 207 aaKnown RBP4.83□□□□□ -1.64
PTPRM-213ENST00000580949 MFAP4P55083 255 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 CD81P60033 236 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 PLP1P60201 277 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 FAM78BQ5VT40 261 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 C10orf113Q5VZT2 155 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 SPNS3Q6ZMD2 512 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 ZNF502Q8TBZ5 544 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 VN1R17PQ8TDU5 208 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 TMEM68Q96MH6 324 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 MS4A10Q96PG2 267 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 UHRF2Q96PU4 802 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 CHRDL1Q9BU40 450 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 C19orf24Q9BVV8 132 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 SLC25A2Q9BXI2 301 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 C21orf62Q9NYP8 219 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 VAX2Q9UIW0 290 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 YTHDF2Q9Y5A9 579 aaKnown RBP4.83□□□□□ -1.64
PTPRM-213ENST00000580949 MXRA5Q9NR99 2828 aa4.83□□□□□ -1.64
PTPRM-213ENST00000580949 WI2-2373I1.2A0A1W2PRP0 233 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 CD5LO43866 347 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 COX7A2P2O60397 106 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 HYPMO75409 117 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 TSPAN9O75954 239 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 C8orf88P0DMB2 117 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 FCGR2BP31994 310 aaPredicted RBP4.82□□□□□ -1.64
PTPRM-213ENST00000580949 NPBWR1P48145 328 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 ATP5G3P48201 142 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 PSMB3P49720 205 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 UBE2G2P60604 165 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 CFHR3Q02985 330 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 C15orf32Q32M92 178 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 SOHLH1Q5JUK2 328 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 FAM90A2PQ658T7 463 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 RBMS3Q6XE24 437 aaKnown RBP4.82□□□□□ -1.64
PTPRM-213ENST00000580949 C16orf82Q7Z2V1 217 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 IQCF2Q8IXL9 164 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 SIGLECL1Q8N7X8 197 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 ZNF491Q8N8L2 437 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 CYB561D1Q8N8Q1 229 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 NECAP1Q8NC96 275 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 OR51G1Q8NGK1 321 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 OR1B1Q8NGR6 318 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 OR5R1Q8NH85 324 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 SUN5Q8TC36 379 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 KLK15Q9H2R5 256 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 SMDT1Q9H4I9 107 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 YAE1D1Q9NRH1 226 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 ZNF355PQ9NSJ1 428 aa4.82□□□□□ -1.64
PTPRM-213ENST00000580949 TECRQ9NZ01 308 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms