RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 PRR20BP86481 221 aa10.9□□□□□ -0.66
SKA2-205ENST00000580541 PRR20AP86496 221 aa10.9□□□□□ -0.66
SKA2-205ENST00000580541 TM4SF20Q53R12 229 aa10.9□□□□□ -0.66
SKA2-205ENST00000580541 C9orf66Q5T8R8 295 aa10.9□□□□□ -0.66
SKA2-205ENST00000580541 SLC51BQ86UW2 128 aa10.9□□□□□ -0.66
SKA2-205ENST00000580541 HSD17B11Q8NBQ5 300 aa10.9□□□□□ -0.66
SKA2-205ENST00000580541 GATAD1Q8WUU5 269 aa10.9□□□□□ -0.66
SKA2-205ENST00000580541 RNF2Q99496 336 aa10.9□□□□□ -0.66
SKA2-205ENST00000580541 ZFAND3Q9H8U3 227 aa10.9□□□□□ -0.66
SKA2-205ENST00000580541 TECRQ9NZ01 308 aaKnown RBP10.9□□□□□ -0.66
SKA2-205ENST00000580541 ZMAT5Q9UDW3 170 aaKnown RBP10.9□□□□□ -0.66
SKA2-205ENST00000580541 HIGD1AQ9Y241 93 aa10.9□□□□□ -0.66
SKA2-205ENST00000580541 IGHV7-4-1A0A0J9YVY3 117 aa10.89□□□□□ -0.67
SKA2-205ENST00000580541 SEC14L6B5MCN3 397 aa10.89□□□□□ -0.67
SKA2-205ENST00000580541 TPT1P13693 172 aaKnown RBP10.89□□□□□ -0.67
SKA2-205ENST00000580541 FOLR2P14207 255 aa10.89□□□□□ -0.67
SKA2-205ENST00000580541 GATA2P23769 480 aaPredicted RBP10.89□□□□□ -0.67
SKA2-205ENST00000580541 ACOT6Q3I5F7 207 aaPredicted RBP10.89□□□□□ -0.67
SKA2-205ENST00000580541 C10orf113Q5VZT2 155 aa10.89□□□□□ -0.67
SKA2-205ENST00000580541 MIC13Q5XKP0 118 aa10.89□□□□□ -0.67
SKA2-205ENST00000580541 LAMTOR1Q6IAA8 161 aa10.89□□□□□ -0.67
SKA2-205ENST00000580541 C9orf62Q8N4C0 152 aa10.89□□□□□ -0.67
SKA2-205ENST00000580541 DYNLRB2Q8TF09 96 aa10.89□□□□□ -0.67
SKA2-205ENST00000580541 CYTL1Q9NRR1 136 aa10.89□□□□□ -0.67
SKA2-205ENST00000580541 SMPXQ9UHP9 88 aa10.89□□□□□ -0.67
SKA2-205ENST00000580541 SAP30O75446 220 aa10.88□□□□□ -0.67
SKA2-205ENST00000580541 C8orf88P0DMB2 117 aa10.88□□□□□ -0.67
SKA2-205ENST00000580541 ATP6V0CP27449 155 aa10.88□□□□□ -0.67
SKA2-205ENST00000580541 USF2Q15853 346 aaPredicted RBP10.88□□□□□ -0.67
SKA2-205ENST00000580541 FFAR4Q5NUL3 377 aa10.88□□□□□ -0.67
SKA2-205ENST00000580541 C1orf194Q5T5A4 169 aa10.88□□□□□ -0.67
SKA2-205ENST00000580541 TMEM182Q6ZP80 229 aaPredicted RBP10.88□□□□□ -0.67
SKA2-205ENST00000580541 BAP18Q8IXM2 172 aa10.88□□□□□ -0.67
SKA2-205ENST00000580541 OR2G3Q8NGZ4 309 aa10.88□□□□□ -0.67
SKA2-205ENST00000580541 RSG1Q9BU20 258 aa10.88□□□□□ -0.67
SKA2-205ENST00000580541 ARV1Q9H2C2 271 aa10.88□□□□□ -0.67
SKA2-205ENST00000580541 IGHV3OR16-8A0A075B7F1 116 aa10.87□□□□□ -0.67
SKA2-205ENST00000580541 TMEM213A2RRL7 107 aa10.87□□□□□ -0.67
SKA2-205ENST00000580541 ZNF207O43670 478 aaKnown RBP10.87□□□□□ -0.67
SKA2-205ENST00000580541 CSN3P07498 182 aa10.87□□□□□ -0.67
SKA2-205ENST00000580541 SEC11BP0C7V7 166 aa10.87□□□□□ -0.67
SKA2-205ENST00000580541 OR2K2Q8NGT1 345 aa10.87□□□□□ -0.67
SKA2-205ENST00000580541 STOML3Q8TAV4 291 aa10.87□□□□□ -0.67
SKA2-205ENST00000580541 GPR82Q96P67 336 aa10.87□□□□□ -0.67
SKA2-205ENST00000580541 RHPN1-AS1Q9BWJ2 59 aa10.87□□□□□ -0.67
SKA2-205ENST00000580541 A0A1W2PPV4 95 aa10.86□□□□□ -0.67
SKA2-205ENST00000580541 HELTA6NFD8 242 aa10.86□□□□□ -0.67
SKA2-205ENST00000580541 CHEK1O14757 476 aa10.86□□□□□ -0.67
SKA2-205ENST00000580541 SPP1P10451 314 aa10.86□□□□□ -0.67
SKA2-205ENST00000580541 M6PRP20645 277 aa10.86□□□□□ -0.67
SKA2-205ENST00000580541 RHOBP62745 196 aa10.86□□□□□ -0.67
SKA2-205ENST00000580541 PAFAH1B2P68402 229 aa10.86□□□□□ -0.67
SKA2-205ENST00000580541 AKR1C8PQ5T2L2 129 aa10.86□□□□□ -0.67
SKA2-205ENST00000580541 LINC00305Q7Z4B0 112 aa10.86□□□□□ -0.67
SKA2-205ENST00000580541 OR8I2Q8N0Y5 310 aa10.86□□□□□ -0.67
SKA2-205ENST00000580541 SLC25A32Q9H2D1 315 aa10.86□□□□□ -0.67
SKA2-205ENST00000580541 DOK5Q9P104 306 aa10.86□□□□□ -0.67
SKA2-205ENST00000580541 U3KQE9 123 aa10.86□□□□□ -0.67
SKA2-205ENST00000580541 TRAV25A0A0B4J276 109 aa10.85□□□□□ -0.67
SKA2-205ENST00000580541 UMAD1C9J7I0 102 aa10.85□□□□□ -0.67
SKA2-205ENST00000580541 BUB3O43684 328 aa10.85□□□□□ -0.67
SKA2-205ENST00000580541 NKX2-5P52952 324 aaPredicted RBP10.85□□□□□ -0.67
SKA2-205ENST00000580541 TAS2R45P59539 299 aa10.85□□□□□ -0.67
SKA2-205ENST00000580541 IL34Q6ZMJ4 242 aa10.85□□□□□ -0.67
SKA2-205ENST00000580541 RBPMS2Q6ZRY4 209 aaKnown RBP10.85□□□□□ -0.67
SKA2-205ENST00000580541 SHANK2-AS3Q9BTD1 123 aa10.85□□□□□ -0.67
SKA2-205ENST00000580541 MRPL32Q9BYC8 188 aaKnown RBP10.85□□□□□ -0.67
SKA2-205ENST00000580541 SLC25A39Q9BZJ4 359 aaPredicted RBP10.85□□□□□ -0.67
SKA2-205ENST00000580541 VSIRQ9H7M9 311 aa10.85□□□□□ -0.67
SKA2-205ENST00000580541 ZNF98A6NK75 572 aa10.84□□□□□ -0.67
SKA2-205ENST00000580541 RPL7P18124 248 aaKnown RBP10.84□□□□□ -0.67
SKA2-205ENST00000580541 GALR1P47211 349 aa10.84□□□□□ -0.67
SKA2-205ENST00000580541 RPL11P62913 178 aaKnown RBP10.84□□□□□ -0.67
SKA2-205ENST00000580541 FAM78BQ5VT40 261 aa10.84□□□□□ -0.67
SKA2-205ENST00000580541 LCN12Q6JVE5 192 aa10.84□□□□□ -0.67
SKA2-205ENST00000580541 STXBP6Q8NFX7 210 aa10.84□□□□□ -0.67
SKA2-205ENST00000580541 OR10G4Q8NGN3 311 aa10.84□□□□□ -0.67
SKA2-205ENST00000580541 OR10G9Q8NGN4 311 aa10.84□□□□□ -0.67
SKA2-205ENST00000580541 OR10G7Q8NGN6 311 aa10.84□□□□□ -0.67
SKA2-205ENST00000580541 TMEM37Q8WXS4 190 aa10.84□□□□□ -0.67
SKA2-205ENST00000580541 ZNF414Q96IQ9 312 aa10.84□□□□□ -0.67
SKA2-205ENST00000580541 NOTCH3Q9UM47 2321 aa10.83□□□□□ -0.68
SKA2-205ENST00000580541 MEOX2P50222 304 aa10.83□□□□□ -0.68
SKA2-205ENST00000580541 RAB5CP51148 216 aa10.83□□□□□ -0.68
SKA2-205ENST00000580541 DEFB114Q30KQ6 69 aa10.83□□□□□ -0.68
SKA2-205ENST00000580541 TMEM41BQ5BJD5 291 aa10.83□□□□□ -0.68
SKA2-205ENST00000580541 SAMD13Q5VXD3 122 aa10.83□□□□□ -0.68
SKA2-205ENST00000580541 C16orf54Q6UWD8 224 aa10.83□□□□□ -0.68
SKA2-205ENST00000580541 PATE2Q6UY27 113 aa10.83□□□□□ -0.68
SKA2-205ENST00000580541 BPIFA4PQ86YQ2 179 aa10.83□□□□□ -0.68
SKA2-205ENST00000580541 ST8SIA2Q92186 375 aa10.83□□□□□ -0.68
SKA2-205ENST00000580541 PHYHIPLQ96FC7 376 aa10.83□□□□□ -0.68
SKA2-205ENST00000580541 ACTR3CQ9C0K3 210 aaPredicted RBP10.83□□□□□ -0.68
SKA2-205ENST00000580541 SLC25A22Q9H936 323 aa10.83□□□□□ -0.68
SKA2-205ENST00000580541 IGHV3-49A0A0A0MS15 119 aa10.82□□□□□ -0.68
SKA2-205ENST00000580541 H3BRN7 92 aa10.82□□□□□ -0.68
SKA2-205ENST00000580541 IGLV1-51P01701 117 aa10.82□□□□□ -0.68
SKA2-205ENST00000580541 IGLL1P15814 213 aa10.82□□□□□ -0.68
SKA2-205ENST00000580541 DPPA3Q6W0C5 159 aa10.82□□□□□ -0.68
SKA2-205ENST00000580541 TCF24Q7RTU0 167 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms