RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 DEFB135Q30KP9 77 aa18.31■□□□□ 0.52
CDC42EP4-205ENST00000580315 OR10P1Q8NGE3 313 aa18.31■□□□□ 0.52
CDC42EP4-205ENST00000580315 GPN1Q9HCN4 374 aaPredicted RBP18.31■□□□□ 0.52
CDC42EP4-205ENST00000580315 NRN1Q9NPD7 142 aa18.31■□□□□ 0.52
CDC42EP4-205ENST00000580315 PMS2P5A8MQ11 134 aa18.3■□□□□ 0.52
CDC42EP4-205ENST00000580315 DLK1P80370 383 aa18.3■□□□□ 0.52
CDC42EP4-205ENST00000580315 C1orf194Q5T5A4 169 aa18.3■□□□□ 0.52
CDC42EP4-205ENST00000580315 GSG1LQ6UXU4 331 aa18.3■□□□□ 0.52
CDC42EP4-205ENST00000580315 STHQ8IWL8 128 aa18.3■□□□□ 0.52
CDC42EP4-205ENST00000580315 C2orf50Q96LR7 162 aa18.3■□□□□ 0.52
CDC42EP4-205ENST00000580315 MGAT4CQ9UBM8 478 aa18.3■□□□□ 0.52
CDC42EP4-205ENST00000580315 C7orf66A4D0T2 115 aa18.29■□□□□ 0.52
CDC42EP4-205ENST00000580315 S100A7P31151 101 aa18.29■□□□□ 0.52
CDC42EP4-205ENST00000580315 DEFA1P59665 94 aa18.29■□□□□ 0.52
CDC42EP4-205ENST00000580315 DEFA3P59666 94 aa18.29■□□□□ 0.52
CDC42EP4-205ENST00000580315 SNRPD3P62318 126 aaKnown RBP18.29■□□□□ 0.52
CDC42EP4-205ENST00000580315 IFITM3Q01628 133 aa18.29■□□□□ 0.52
CDC42EP4-205ENST00000580315 RNF183Q96D59 192 aa18.29■□□□□ 0.52
CDC42EP4-205ENST00000580315 SLC45A2Q9UMX9 530 aa18.29■□□□□ 0.52
CDC42EP4-205ENST00000580315 LSM5Q9Y4Y9 91 aaKnown RBP18.29■□□□□ 0.52
CDC42EP4-205ENST00000580315 FNDC10F2Z333 226 aa18.28■□□□□ 0.52
CDC42EP4-205ENST00000580315 RRAS2P62070 204 aaPredicted RBP18.28■□□□□ 0.52
CDC42EP4-205ENST00000580315 NPVFQ9HCQ7 196 aa18.28■□□□□ 0.52
CDC42EP4-205ENST00000580315 SEPSECSQ9HD40 501 aaKnown RBP18.28■□□□□ 0.52
CDC42EP4-205ENST00000580315 CCNKO75909 580 aa18.27■□□□□ 0.52
CDC42EP4-205ENST00000580315 PVALBP20472 110 aaPredicted RBP18.27■□□□□ 0.52
CDC42EP4-205ENST00000580315 PSMG4Q5JS54 123 aa18.27■□□□□ 0.52
CDC42EP4-205ENST00000580315 NRARPQ7Z6K4 114 aa18.27■□□□□ 0.52
CDC42EP4-205ENST00000580315 K7EPK0 472 aa18.26■□□□□ 0.51
CDC42EP4-205ENST00000580315 PRAF2O60831 178 aa18.26■□□□□ 0.51
CDC42EP4-205ENST00000580315 ORM2P19652 201 aa18.26■□□□□ 0.51
CDC42EP4-205ENST00000580315 BCAP31P51572 246 aa18.26■□□□□ 0.51
CDC42EP4-205ENST00000580315 CYP2G1PQ6ZSU1 146 aa18.26■□□□□ 0.51
CDC42EP4-205ENST00000580315 OR8I2Q8N0Y5 310 aa18.26■□□□□ 0.51
CDC42EP4-205ENST00000580315 TMEM147Q9BVK8 224 aa18.26■□□□□ 0.51
CDC42EP4-205ENST00000580315 GGACTQ9BVM4 153 aa18.26■□□□□ 0.51
CDC42EP4-205ENST00000580315 GATA2P23769 480 aaPredicted RBP18.25■□□□□ 0.51
CDC42EP4-205ENST00000580315 S100A10P60903 97 aa18.25■□□□□ 0.51
CDC42EP4-205ENST00000580315 SELENOTP62341 195 aa18.25■□□□□ 0.51
CDC42EP4-205ENST00000580315 ALMS1Q8TCU4 4167 aa18.24■□□□□ 0.51
CDC42EP4-205ENST00000580315 INMT-MINDY4F8WBC2 141 aa18.24■□□□□ 0.51
CDC42EP4-205ENST00000580315 CA1P00915 261 aaPredicted RBP18.24■□□□□ 0.51
CDC42EP4-205ENST00000580315 CAV2P51636 162 aa18.24■□□□□ 0.51
CDC42EP4-205ENST00000580315 TEPPQ6URK8 271 aa18.24■□□□□ 0.51
CDC42EP4-205ENST00000580315 OR1B1Q8NGR6 318 aa18.24■□□□□ 0.51
CDC42EP4-205ENST00000580315 GATAD1Q8WUU5 269 aa18.24■□□□□ 0.51
CDC42EP4-205ENST00000580315 KNCNA6PVL3 124 aa18.23■□□□□ 0.51
CDC42EP4-205ENST00000580315 DEDDO75618 318 aa18.23■□□□□ 0.51
CDC42EP4-205ENST00000580315 ID1P41134 155 aa18.23■□□□□ 0.51
CDC42EP4-205ENST00000580315 ACTL10Q5JWF8 245 aa18.23■□□□□ 0.51
CDC42EP4-205ENST00000580315 TMEM182Q6ZP80 229 aaPredicted RBP18.23■□□□□ 0.51
CDC42EP4-205ENST00000580315 TRPT1Q86TN4 253 aaKnown RBP18.23■□□□□ 0.51
CDC42EP4-205ENST00000580315 GALR1P47211 349 aa18.22■□□□□ 0.51
CDC42EP4-205ENST00000580315 SAMD13Q5VXD3 122 aa18.22■□□□□ 0.51
CDC42EP4-205ENST00000580315 MORN3Q6PF18 240 aaPredicted RBP18.22■□□□□ 0.51
CDC42EP4-205ENST00000580315 S100A7AQ86SG5 101 aa18.22■□□□□ 0.51
CDC42EP4-205ENST00000580315 SLC25A22Q9H936 323 aa18.22■□□□□ 0.51
CDC42EP4-205ENST00000580315 ZNF98A6NK75 572 aa18.21■□□□□ 0.51
CDC42EP4-205ENST00000580315 SPP1P10451 314 aa18.21■□□□□ 0.51
CDC42EP4-205ENST00000580315 RAP2BP61225 183 aa18.21■□□□□ 0.51
CDC42EP4-205ENST00000580315 ARL16Q0P5N6 197 aa18.21■□□□□ 0.51
CDC42EP4-205ENST00000580315 GPR82Q96P67 336 aa18.21■□□□□ 0.51
CDC42EP4-205ENST00000580315 HYPMO75409 117 aa18.2■□□□□ 0.5
CDC42EP4-205ENST00000580315 LINC00869P0C866 280 aa18.2■□□□□ 0.5
CDC42EP4-205ENST00000580315 SLC38A11Q08AI6 406 aa18.2■□□□□ 0.5
CDC42EP4-205ENST00000580315 IL15RAQ13261 267 aa18.2■□□□□ 0.5
CDC42EP4-205ENST00000580315 RAB32Q13637 225 aa18.2■□□□□ 0.5
CDC42EP4-205ENST00000580315 TMEM41BQ5BJD5 291 aa18.2■□□□□ 0.5
CDC42EP4-205ENST00000580315 MARVELD1Q9BSK0 173 aa18.2■□□□□ 0.5
CDC42EP4-205ENST00000580315 DOK5Q9P104 306 aa18.2■□□□□ 0.5
CDC42EP4-205ENST00000580315 HIGD1AQ9Y241 93 aa18.2■□□□□ 0.5
CDC42EP4-205ENST00000580315 A0A0J9YWU9 116 aa18.19■□□□□ 0.5
CDC42EP4-205ENST00000580315 GOSR2O14653 212 aa18.19■□□□□ 0.5
CDC42EP4-205ENST00000580315 PSMB3P49720 205 aa18.19■□□□□ 0.5
CDC42EP4-205ENST00000580315 MEOX2P50222 304 aa18.19■□□□□ 0.5
CDC42EP4-205ENST00000580315 ZNF546Q86UE3 836 aa18.19■□□□□ 0.5
CDC42EP4-205ENST00000580315 TMEM217Q8N7C4 229 aa18.19■□□□□ 0.5
CDC42EP4-205ENST00000580315 RARRES2Q99969 163 aa18.19■□□□□ 0.5
CDC42EP4-205ENST00000580315 SLC25A32Q9H2D1 315 aa18.19■□□□□ 0.5
CDC42EP4-205ENST00000580315 C11orf1Q9H5F2 150 aa18.19■□□□□ 0.5
CDC42EP4-205ENST00000580315 LYRM2Q9NU23 88 aaPredicted RBP18.19■□□□□ 0.5
CDC42EP4-205ENST00000580315 FAM24AA6NFZ4 105 aa18.18■□□□□ 0.5
CDC42EP4-205ENST00000580315 OR5G3P0C626 314 aa18.18■□□□□ 0.5
CDC42EP4-205ENST00000580315 PLP1P60201 277 aa18.18■□□□□ 0.5
CDC42EP4-205ENST00000580315 STX12Q86Y82 276 aa18.18■□□□□ 0.5
CDC42EP4-205ENST00000580315 LINC00476Q8WZB0 136 aa18.18■□□□□ 0.5
CDC42EP4-205ENST00000580315 LINC00052Q96N35 136 aa18.18■□□□□ 0.5
CDC42EP4-205ENST00000580315 CST7O76096 145 aa18.17■□□□□ 0.5
CDC42EP4-205ENST00000580315 SULT1A1P50225 295 aa18.17■□□□□ 0.5
CDC42EP4-205ENST00000580315 RAB31Q13636 194 aa18.17■□□□□ 0.5
CDC42EP4-205ENST00000580315 PXDC1Q5TGL8 231 aa18.17■□□□□ 0.5
CDC42EP4-205ENST00000580315 SLC25A39Q9BZJ4 359 aaPredicted RBP18.17■□□□□ 0.5
CDC42EP4-205ENST00000580315 RNF24Q9Y225 148 aa18.17■□□□□ 0.5
CDC42EP4-205ENST00000580315 H3BRN7 92 aa18.16■□□□□ 0.5
CDC42EP4-205ENST00000580315 ISLRO14498 428 aa18.16■□□□□ 0.5
CDC42EP4-205ENST00000580315 AGPAT2O15120 278 aa18.16■□□□□ 0.5
CDC42EP4-205ENST00000580315 RLN2P04090 185 aa18.16■□□□□ 0.5
CDC42EP4-205ENST00000580315 NUTF2P61970 127 aaKnown RBP18.16■□□□□ 0.5
CDC42EP4-205ENST00000580315 CYCSP99999 105 aaKnown RBP18.16■□□□□ 0.5
CDC42EP4-205ENST00000580315 OR11H2Q8NH07 326 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms