RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 WT1-ASQ06250 92 aa10.08□□□□□ -0.8
CDK5RAP3-217ENST00000580287 LOXL1Q08397 574 aaPredicted RBP10.08□□□□□ -0.8
CDK5RAP3-217ENST00000580287 TMEM144Q7Z5S9 345 aa10.08□□□□□ -0.8
CDK5RAP3-217ENST00000580287 SIGLEC9Q9Y336 463 aa10.08□□□□□ -0.8
CDK5RAP3-217ENST00000580287 YTHDF2Q9Y5A9 579 aaKnown RBP10.08□□□□□ -0.8
CDK5RAP3-217ENST00000580287 KIR2DL5BA0A0G2JN68 375 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 KIR2DL5BA0A0G2JPC4 375 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 A0A1W2PN81 502 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 NCBP2LA6PVI3 153 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 ZNF25P17030 456 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 RAB4AP20338 218 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 LGALS7P47929 136 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 PLGLAQ15195 96 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 C1orf194Q5T5A4 169 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 MINOS1Q5TGZ0 78 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 MIR17HGQ75NE6 70 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 LINC01551Q86U37 167 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 KIR2DL5AQ8N109 375 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 MBD6Q96DN6 1003 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 SLC35E1Q96K37 410 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 MINOS1-NBL1R4GNA1 71 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 SH2D7A6NKC9 451 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 PDE6DO43924 150 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 GCHFRP30047 84 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 SRP14P37108 136 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 CNN1P51911 297 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 CD69Q07108 199 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 TNXAQ16473 311 aa10.07□□□□□ -0.8
CDK5RAP3-217ENST00000580287 CUBNO60494 3623 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 MDFIC2A0A1B0GVS7 189 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 MT-CO2P00403 227 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 MOSP00540 346 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 CRYGBP07316 175 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 SSBP2P81877 361 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 PRR20EP86478 221 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 PRR20CP86479 221 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 PRR20DP86480 221 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 PRR20BP86481 221 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 PRR20AP86496 221 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 BCL6BQ8N143 479 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 FAM103A1Q9BTL3 118 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 SLC45A2Q9UMX9 530 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 OTOGQ6ZRI0 2925 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 OR7C2O60412 319 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 FRMD6-AS1P0C7T7 363 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 LINC00869P0C866 280 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 PPP1R27Q86WC6 154 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 TMEM219Q86XT9 240 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 OR4A5Q8NH83 315 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 NAGKQ9UJ70 344 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 CR1P17927 2039 aa10.06□□□□□ -0.8
CDK5RAP3-217ENST00000580287 SUB1P53999 127 aaKnown RBP eCLIP10.05□□□□□ -0.8
CDK5RAP3-217ENST00000580287 CCDC144NLQ6NUI1 221 aa10.05□□□□□ -0.8
CDK5RAP3-217ENST00000580287 TBL2Q9Y4P3 447 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-217ENST00000580287 RPL15P61313 204 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-217ENST00000580287 TMEM256Q8N2U0 113 aa10.05□□□□□ -0.8
CDK5RAP3-217ENST00000580287 NPIPB3Q92617 1050 aa10.05□□□□□ -0.8
CDK5RAP3-217ENST00000580287 IGHV3-21A0A0B4J1V1 117 aa10.04□□□□□ -0.8
CDK5RAP3-217ENST00000580287 FNDC10F2Z333 226 aa10.04□□□□□ -0.8
CDK5RAP3-217ENST00000580287 SLC17A3O00476 420 aa10.04□□□□□ -0.8
CDK5RAP3-217ENST00000580287 NUPR1O60356 82 aa10.04□□□□□ -0.8
CDK5RAP3-217ENST00000580287 OR10J4P0C629 311 aa10.04□□□□□ -0.8
CDK5RAP3-217ENST00000580287 AREGP15514 252 aa10.04□□□□□ -0.8
CDK5RAP3-217ENST00000580287 ATP5IP56385 69 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP3-217ENST00000580287 KCNIP4Q6PIL6 250 aa10.04□□□□□ -0.8
CDK5RAP3-217ENST00000580287 RNF125Q96EQ8 232 aa10.04□□□□□ -0.8
CDK5RAP3-217ENST00000580287 F6UZH7 168 aa10.04□□□□□ -0.8
CDK5RAP3-217ENST00000580287 NBR2O15453 112 aa10.04□□□□□ -0.8
CDK5RAP3-217ENST00000580287 TEX45Q8NA69 505 aa10.04□□□□□ -0.8
CDK5RAP3-217ENST00000580287 OCC1Q8TAD7 63 aa10.04□□□□□ -0.8
CDK5RAP3-217ENST00000580287 FNDC4Q9H6D8 234 aaPredicted RBP10.04□□□□□ -0.8
CDK5RAP3-217ENST00000580287 OR5I1Q13606 314 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 LY6EQ16553 131 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 PRSS57Q6UWY2 283 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 IL17RELQ6ZVW7 336 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 SGMS2Q8NHU3 365 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 PIFOQ8TCI5 191 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 TMEM208Q9BTX3 173 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 MTORP42345 2549 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 SPINK4O60575 86 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 RPL27AP46776 148 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 MMD2Q8IY49 270 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 CACNG8Q8WXS5 425 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 MS4A10Q96PG2 267 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 TRAPPC1Q9Y5R8 145 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 ZNF705FA8MVS1 300 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 K7EN84 100 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 CNIH1O95406 144 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 ZNF705DP0CH99 300 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 ZNF705BP0CI00 300 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 CD33P20138 364 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 ZNF90Q03938 601 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 MORN5Q5VZ52 161 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 ZNF705AQ6ZN79 300 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 IMMP2LQ96T52 175 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 TNFRSF19Q9NS68 423 aa10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 TECRQ9NZ01 308 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-217ENST00000580287 OOSP1A8MZH6 123 aa10.02□□□□□ -0.81
CDK5RAP3-217ENST00000580287 DLEU1O43261 78 aa10.02□□□□□ -0.81
CDK5RAP3-217ENST00000580287 RPLP1P05386 114 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms