RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 IGKV1OR2-108A0A075B7D4 117 aa14.42□□□□□ -0.1
LIMD2-209ENST00000580222 IGHV3OR16-8A0A075B7F1 116 aa14.42□□□□□ -0.1
LIMD2-209ENST00000580222 TOMM40O96008 361 aa14.42□□□□□ -0.1
LIMD2-209ENST00000580222 Q8WTZ3 238 aa14.42□□□□□ -0.1
LIMD2-209ENST00000580222 SMIM3Q9BZL3 60 aa14.42□□□□□ -0.1
LIMD2-209ENST00000580222 SIGLEC8Q9NYZ4 499 aa14.42□□□□□ -0.1
LIMD2-209ENST00000580222 UFC1Q9Y3C8 167 aa14.42□□□□□ -0.1
LIMD2-209ENST00000580222 NUPR2A6NF83 97 aa14.41□□□□□ -0.1
LIMD2-209ENST00000580222 A8MWP6 167 aa14.41□□□□□ -0.1
LIMD2-209ENST00000580222 ARPC5O15511 151 aa14.41□□□□□ -0.1
LIMD2-209ENST00000580222 RD3LP0DJH9 198 aa14.41□□□□□ -0.1
LIMD2-209ENST00000580222 ZNF90Q03938 601 aa14.41□□□□□ -0.1
LIMD2-209ENST00000580222 VWC2Q2TAL6 325 aa14.41□□□□□ -0.1
LIMD2-209ENST00000580222 CD300EQ496F6 205 aaPredicted RBP14.41□□□□□ -0.1
LIMD2-209ENST00000580222 TOMM20LQ6UXN7 152 aa14.41□□□□□ -0.1
LIMD2-209ENST00000580222 TCTE3Q8IZS6 198 aa14.41□□□□□ -0.1
LIMD2-209ENST00000580222 ZNF414Q96IQ9 312 aa14.41□□□□□ -0.1
LIMD2-209ENST00000580222 ATP5SQ99766 215 aa14.41□□□□□ -0.1
LIMD2-209ENST00000580222 GINS3Q9BRX5 216 aa14.41□□□□□ -0.1
LIMD2-209ENST00000580222 A0A0J9YWU9 116 aa14.4□□□□□ -0.1
LIMD2-209ENST00000580222 RNF222A6NCQ9 220 aa14.4□□□□□ -0.1
LIMD2-209ENST00000580222 OR11H12B2RN74 326 aa14.4□□□□□ -0.1
LIMD2-209ENST00000580222 DFFBO76075 338 aa14.4□□□□□ -0.1
LIMD2-209ENST00000580222 PSG1P11464 419 aa14.4□□□□□ -0.1
LIMD2-209ENST00000580222 AP2S1P53680 142 aaPredicted RBP14.4□□□□□ -0.1
LIMD2-209ENST00000580222 PRR20EP86478 221 aa14.4□□□□□ -0.1
LIMD2-209ENST00000580222 PRR20CP86479 221 aa14.4□□□□□ -0.1
LIMD2-209ENST00000580222 PRR20DP86480 221 aa14.4□□□□□ -0.1
LIMD2-209ENST00000580222 PRR20BP86481 221 aa14.4□□□□□ -0.1
LIMD2-209ENST00000580222 PRR20AP86496 221 aa14.4□□□□□ -0.1
LIMD2-209ENST00000580222 OR2F1Q13607 317 aa14.4□□□□□ -0.1
LIMD2-209ENST00000580222 CYP2G1PQ6ZSU1 146 aa14.4□□□□□ -0.1
LIMD2-209ENST00000580222 OR51G1Q8NGK1 321 aa14.4□□□□□ -0.1
LIMD2-209ENST00000580222 KRTAP4-5Q9BYR2 181 aa14.4□□□□□ -0.1
LIMD2-209ENST00000580222 ZFAND3Q9H8U3 227 aa14.4□□□□□ -0.1
LIMD2-209ENST00000580222 FBXL17Q9UF56 701 aa14.4□□□□□ -0.1
LIMD2-209ENST00000580222 WDR83OSQ9Y284 106 aa14.4□□□□□ -0.1
LIMD2-209ENST00000580222 ZNF207O43670 478 aaKnown RBP14.39□□□□□ -0.11
LIMD2-209ENST00000580222 IL4P05112 153 aa14.39□□□□□ -0.11
LIMD2-209ENST00000580222 FGF7P21781 194 aa14.39□□□□□ -0.11
LIMD2-209ENST00000580222 ELLP55199 621 aaPredicted RBP14.39□□□□□ -0.11
LIMD2-209ENST00000580222 BTNL8Q6UX41 500 aa14.39□□□□□ -0.11
LIMD2-209ENST00000580222 BPIFCQ8NFQ6 507 aa14.39□□□□□ -0.11
LIMD2-209ENST00000580222 DAZ1Q9NQZ3 744 aaKnown RBP14.39□□□□□ -0.11
LIMD2-209ENST00000580222 TMEM213A2RRL7 107 aa14.38□□□□□ -0.11
LIMD2-209ENST00000580222 C2orf70A6NJV1 201 aa14.38□□□□□ -0.11
LIMD2-209ENST00000580222 AGPAT2O15120 278 aa14.38□□□□□ -0.11
LIMD2-209ENST00000580222 EDN2P20800 178 aa14.38□□□□□ -0.11
LIMD2-209ENST00000580222 LYZP61626 148 aa14.38□□□□□ -0.11
LIMD2-209ENST00000580222 RAB31Q13636 194 aa14.38□□□□□ -0.11
LIMD2-209ENST00000580222 TM4SF20Q53R12 229 aa14.38□□□□□ -0.11
LIMD2-209ENST00000580222 MGST2Q99735 147 aa14.38□□□□□ -0.11
LIMD2-209ENST00000580222 PBDC1Q9BVG4 233 aa14.38□□□□□ -0.11
LIMD2-209ENST00000580222 IFNA5P01569 189 aa14.37□□□□□ -0.11
LIMD2-209ENST00000580222 GATA2P23769 480 aaPredicted RBP14.37□□□□□ -0.11
LIMD2-209ENST00000580222 CAMLGP49069 296 aa14.37□□□□□ -0.11
LIMD2-209ENST00000580222 SELENOTP62341 195 aa14.37□□□□□ -0.11
LIMD2-209ENST00000580222 LGALS9CQ6DKI2 356 aa14.37□□□□□ -0.11
LIMD2-209ENST00000580222 OR11H4Q8NGC9 324 aa14.37□□□□□ -0.11
LIMD2-209ENST00000580222 RNF125Q96EQ8 232 aa14.37□□□□□ -0.11
LIMD2-209ENST00000580222 MFFQ9GZY8 342 aa14.37□□□□□ -0.11
LIMD2-209ENST00000580222 SELENOKQ9Y6D0 94 aa14.37□□□□□ -0.11
LIMD2-209ENST00000580222 HMSDA8MTL9 139 aa14.36□□□□□ -0.11
LIMD2-209ENST00000580222 K7EMT4 169 aa14.36□□□□□ -0.11
LIMD2-209ENST00000580222 MPDU1O75352 247 aa14.36□□□□□ -0.11
LIMD2-209ENST00000580222 CFDP00746 253 aaPredicted RBP14.36□□□□□ -0.11
LIMD2-209ENST00000580222 DYNLRB2Q8TF09 96 aa14.36□□□□□ -0.11
LIMD2-209ENST00000580222 METTL26Q96S19 204 aa14.36□□□□□ -0.11
LIMD2-209ENST00000580222 WDR61Q9GZS3 305 aaKnown RBP14.36□□□□□ -0.11
LIMD2-209ENST00000580222 C1QBP02746 253 aa14.35□□□□□ -0.11
LIMD2-209ENST00000580222 LINC00869P0C866 280 aa14.35□□□□□ -0.11
LIMD2-209ENST00000580222 FOLR2P14207 255 aa14.35□□□□□ -0.11
LIMD2-209ENST00000580222 ZNF266Q14584 549 aa14.35□□□□□ -0.11
LIMD2-209ENST00000580222 USF2Q15853 346 aaPredicted RBP14.35□□□□□ -0.11
LIMD2-209ENST00000580222 TMEM182Q6ZP80 229 aaPredicted RBP14.35□□□□□ -0.11
LIMD2-209ENST00000580222 OR2K2Q8NGT1 345 aa14.35□□□□□ -0.11
LIMD2-209ENST00000580222 SCGB1C1Q8TD33 95 aa14.35□□□□□ -0.11
LIMD2-209ENST00000580222 MARC2Q969Z3 335 aa14.35□□□□□ -0.11
LIMD2-209ENST00000580222 GGTLC1Q9BX51 225 aa14.35□□□□□ -0.11
LIMD2-209ENST00000580222 WFDC1Q9HC57 220 aa14.35□□□□□ -0.11
LIMD2-209ENST00000580222 MRPL27Q9P0M9 148 aaKnown RBP14.35□□□□□ -0.11
LIMD2-209ENST00000580222 RABAC1Q9UI14 185 aa14.35□□□□□ -0.11
LIMD2-209ENST00000580222 PKD1P98161 4303 aa14.35□□□□□ -0.11
LIMD2-209ENST00000580222 IGHV3-49A0A0A0MS15 119 aa14.34□□□□□ -0.11
LIMD2-209ENST00000580222 IGHV7-4-1A0A0J9YVY3 117 aa14.34□□□□□ -0.11
LIMD2-209ENST00000580222 CBLN1P23435 193 aa14.34□□□□□ -0.11
LIMD2-209ENST00000580222 NPPCP23582 126 aa14.34□□□□□ -0.11
LIMD2-209ENST00000580222 CD300CQ08708 224 aa14.34□□□□□ -0.11
LIMD2-209ENST00000580222 ZNF345Q14585 488 aa14.34□□□□□ -0.11
LIMD2-209ENST00000580222 OPCMLQ14982 345 aa14.34□□□□□ -0.11
LIMD2-209ENST00000580222 DEFB114Q30KQ6 69 aa14.34□□□□□ -0.11
LIMD2-209ENST00000580222 NARS2Q96I59 477 aaKnown RBP14.34□□□□□ -0.11
LIMD2-209ENST00000580222 NPCDR1Q9BY65 106 aa14.34□□□□□ -0.11
LIMD2-209ENST00000580222 SLC45A2Q9UMX9 530 aa14.34□□□□□ -0.11
LIMD2-209ENST00000580222 C17orf112F2Z3M2 114 aa14.33□□□□□ -0.12
LIMD2-209ENST00000580222 HNRNPCP07910 306 aaKnown RBP eCLIP14.33□□□□□ -0.12
LIMD2-209ENST00000580222 BMI1P35226 326 aa14.33□□□□□ -0.12
LIMD2-209ENST00000580222 EIF2B2P49770 351 aaKnown RBP14.33□□□□□ -0.12
LIMD2-209ENST00000580222 GUCA2BQ16661 112 aa14.33□□□□□ -0.12
LIMD2-209ENST00000580222 MIC13Q5XKP0 118 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms