RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 STAG3L3P0CL85 134 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 HOXD3P31249 432 aaPredicted RBP7.91□□□□□ -1.14
SS18-210ENST00000578700 KRTAP10-11P60412 298 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 NDPQ00604 133 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 TMEM95Q3KNT9 176 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 Q56UQ5 140 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 GCSAMLQ5JQS6 135 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 PQLC2Q6ZP29 291 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 Q6ZS46 218 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 C19orf35Q6ZS72 473 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 SSX7Q7RTT5 188 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 STXBP6Q8NFX7 210 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 PIFOQ8TCI5 191 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 TXN2Q99757 166 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 HSPB9Q9BQS6 159 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 TMEM167BQ9NRX6 74 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 C21orf62Q9NYP8 219 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 FBXL7Q9UJT9 491 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 RNF24Q9Y225 148 aa7.91□□□□□ -1.14
SS18-210ENST00000578700 K7EIM0 57 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 OR7C2O60412 319 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 HYPMO75409 117 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 RD3LP0DJH9 198 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 ARL14EPLP0DKL9 152 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 C8orf88P0DMB2 117 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 ORM2P19652 201 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 BLCAPP62952 87 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 MEF2BQ02080 365 aaPredicted RBP7.9□□□□□ -1.14
SS18-210ENST00000578700 ZNF90Q03938 601 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 ICAM4Q14773 271 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 ASPHD1Q5U4P2 390 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 NECAP1Q8NC96 275 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 WFDC9Q8NEX5 89 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 OR5AU1Q8NGC0 362 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 OR1B1Q8NGR6 318 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 VN1R17PQ8TDU5 208 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 Q8WTZ3 238 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 RARRES2Q99969 163 aa7.9□□□□□ -1.14
SS18-210ENST00000578700 SEPSECSQ9HD40 501 aaKnown RBP7.9□□□□□ -1.14
SS18-210ENST00000578700 STAB2Q8WWQ8 2551 aa7.9□□□□□ -1.15
SS18-210ENST00000578700 AP4M1O00189 453 aa7.89□□□□□ -1.15
SS18-210ENST00000578700 PDE6DO43924 150 aa7.89□□□□□ -1.15
SS18-210ENST00000578700 NDUFS6O75380 124 aaKnown RBP7.89□□□□□ -1.15
SS18-210ENST00000578700 OR2J3O76001 311 aa7.89□□□□□ -1.15
SS18-210ENST00000578700 SRP19P09132 144 aaKnown RBP7.89□□□□□ -1.15
SS18-210ENST00000578700 IGLC1P0CG04 106 aa7.89□□□□□ -1.15
SS18-210ENST00000578700 EGR2P11161 476 aaPredicted RBP7.89□□□□□ -1.15
SS18-210ENST00000578700 GATA2P23769 480 aaPredicted RBP7.89□□□□□ -1.15
SS18-210ENST00000578700 GCHFRP30047 84 aa7.89□□□□□ -1.15
SS18-210ENST00000578700 KHDC1LQ5JSQ8 128 aa7.89□□□□□ -1.15
SS18-210ENST00000578700 C10orf91Q5T1B1 145 aa7.89□□□□□ -1.15
SS18-210ENST00000578700 CST9LP1Q5W188 147 aa7.89□□□□□ -1.15
SS18-210ENST00000578700 FANCD2OSQ96PS1 177 aa7.89□□□□□ -1.15
SS18-210ENST00000578700 UHRF2Q96PU4 802 aa7.89□□□□□ -1.15
SS18-210ENST00000578700 NIPSNAP3BQ9BS92 247 aa7.89□□□□□ -1.15
SS18-210ENST00000578700 TMPRSS5Q9H3S3 457 aa7.89□□□□□ -1.15
SS18-210ENST00000578700 DOK5Q9P104 306 aa7.89□□□□□ -1.15
SS18-210ENST00000578700 DMRT1Q9Y5R6 373 aa7.89□□□□□ -1.15
SS18-210ENST00000578700 RYR2Q92736 4967 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 IGKV1D-37A0A075B6S9 117 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 FAM223BA6NKX1 122 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 C11orf94C9JXX5 98 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 F6UZH7 168 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 TMEM250H0YL14 139 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 H3BUA1 57 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 M0R036 132 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 NUPL2O15504 423 aaKnown RBP7.88□□□□□ -1.15
SS18-210ENST00000578700 PAGE4O60829 102 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 TOMM40O96008 361 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 IGHG2P01859 326 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 IGF1P05019 195 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 CRIP2P52943 208 aaPredicted RBP7.88□□□□□ -1.15
SS18-210ENST00000578700 YPEL3P61236 119 aaPredicted RBP7.88□□□□□ -1.15
SS18-210ENST00000578700 LYZP61626 148 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 RHOGP84095 191 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 ATP5G2Q06055 141 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 TIGITQ495A1 244 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 FAM74A3Q4VXF1 159 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 MIR17HGQ75NE6 70 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 LINC00305Q7Z4B0 112 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 FAM223AQ8IWN6 122 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 Q8N2B8 174 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 OR51G1Q8NGK1 321 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 EEF1AKMT3Q96AZ1 226 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 NKX6-2Q9C056 277 aaPredicted RBP7.88□□□□□ -1.15
SS18-210ENST00000578700 MRPL36Q9P0J6 103 aaKnown RBP7.88□□□□□ -1.15
SS18-210ENST00000578700 HIGD1AQ9Y241 93 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 ARL2-SNX15V9GYD0 113 aa7.88□□□□□ -1.15
SS18-210ENST00000578700 LYSTQ99698 3801 aa7.87□□□□□ -1.15
SS18-210ENST00000578700 EPPK1P58107 5090 aaKnown RBP7.87□□□□□ -1.15
SS18-210ENST00000578700 TRBV7-1A0A0A6YYK4 115 aa7.87□□□□□ -1.15
SS18-210ENST00000578700 SH2D7A6NKC9 451 aaPredicted RBP7.87□□□□□ -1.15
SS18-210ENST00000578700 C9JQL5 133 aa7.87□□□□□ -1.15
SS18-210ENST00000578700 EIF3GO75821 320 aaKnown RBP eCLIP7.87□□□□□ -1.15
SS18-210ENST00000578700 NDUFB8O95169 186 aa7.87□□□□□ -1.15
SS18-210ENST00000578700 PSG1P11464 419 aa7.87□□□□□ -1.15
SS18-210ENST00000578700 FCGR2BP31994 310 aaPredicted RBP7.87□□□□□ -1.15
SS18-210ENST00000578700 UBE2L3P68036 154 aaKnown RBP7.87□□□□□ -1.15
SS18-210ENST00000578700 C15orf32Q32M92 178 aa7.87□□□□□ -1.15
SS18-210ENST00000578700 SPATA31B1PQ5VZV4 182 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms