RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329		Q8WTZ3	238 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	RRNAD1	Q96FB5	475 aa	Known RBP	3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TRGV9	Q99603	122 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	C6orf62	Q9GZU0	229 aa	Predicted RBP	3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	C11orf1	Q9H5F2	150 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	CCDC59	Q9P031	241 aa	Known RBP	3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329	HERC1	Q15751	4861 aa		3.12	□□□□□ -1.91
PPP4R1-209	ENST00000578329		A0A1W2PS18	150 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	PRSS29P	A6NIE9	313 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	ZNF98	A6NK75	572 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	CEBPZOS	A8MTT3	80 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	PRAC2	D3DTV9	90 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	ADAP1	O75689	374 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	B3GALNT1	O75752	331 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	IFNA4	P05014	189 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	IAPP	P10997	89 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	GPX4	P36969	197 aa	Predicted RBP	3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	CCR6	P51684	374 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SUB1	P53999	127 aa	Known RBP eCLIP	3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	ID3	Q02535	119 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TNP2	Q05952	138 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	PPP1R1A	Q13522	171 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TMEM41B	Q5BJD5	291 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	OR8G2P	Q6IF36	304 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	MZT2A	Q6P582	158 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TMEM88	Q6PEY1	159 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	FOXI2	Q6ZQN5	318 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	CCDC190	Q86UF4	302 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	LGI3	Q8N145	548 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	RNF182	Q8N6D2	247 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	CCDC71L	Q8N9Z2	235 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	OR11H7	Q8NGC8	314 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	ZNRF2	Q8NHG8	242 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	DIRAS2	Q96HU8	199 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	KRTAP4-12	Q9BQ66	201 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	MAGT1	Q9H0U3	335 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	YTHDF2	Q9Y5A9	579 aa	Known RBP	3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329		U3KQ87	197 aa		3.11	□□□□□ -1.91
PPP4R1-209	ENST00000578329	RPS10-NUDT3	A0A1W2PQS6	291 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	ZNF705G	A8MUZ8	300 aa	Predicted RBP	3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	DISC1	C4P0D8	188 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329		H3BP45	60 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329		H3BRN7	92 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329		M0R2Z0	102 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	ISLR	O14498	428 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	LCE2B	O14633	110 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	RGS5	O15539	181 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	IFNA10	P01566	189 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	MED14OS	P0DP75	135 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	AKR1C4	P17516	323 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	S100G	P29377	79 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	PSMB3	P49720	205 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	CNN1	P51911	297 aa	Known RBP	3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	EMP1	P54849	157 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TMBIM6	P55061	237 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	LYZ	P61626	148 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	MRPS10	P82664	201 aa	Known RBP	3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	PSG9	Q00887	426 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	OXA1L	Q15070	435 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	BAK1	Q16611	211 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	C1orf194	Q5T5A4	169 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	GGNBP1	Q5YKI7	109 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329		Q6ZQT7	251 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	LINC00336	Q6ZUF6	198 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	BAP18	Q8IXM2	172 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	LINC00612	Q8N6U2	182 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	OR4D5	Q8NGN0	318 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	AP3S1	Q92572	193 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	LINC00052	Q96N35	136 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	UHRF2	Q96PU4	802 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	PRRT1	Q99946	306 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	RSG1	Q9BU20	258 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	PBDC1	Q9BVG4	233 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	PARD6G	Q9BYG4	376 aa	Predicted RBP	3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	MRPS26	Q9BYN8	205 aa	Known RBP	3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SRR	Q9GZT4	340 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TMEM231	Q9H6L2	316 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	VCX3A	Q9NNX9	186 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	FLVCR2	Q9UPI3	526 aa		3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	C14orf166	Q9Y224	244 aa	Known RBP	3.1	□□□□□ -1.91
PPP4R1-209	ENST00000578329	FAT1	Q14517	4588 aa		3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	TRAV12-2	A0A075B6T6	113 aa		3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	IGHV3OR16-12	A0A075B7B8	117 aa		3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	LOC102723971	A0A1B0GUV8	181 aa		3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	LINC00854	A0A1B0GVQ3	168 aa		3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SMIM9	A6NGZ8	99 aa		3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	ZFP92	A6NM28	416 aa		3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329		H3BQ15	152 aa		3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SLC17A3	O00476	420 aa		3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	ATG12	O94817	140 aa		3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SFT2D2	O95562	160 aa		3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SNRPC	P09234	159 aa	Known RBP	3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	LINC00869	P0C866	280 aa		3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SPART-AS1	P0CW21	52 aa		3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	SLC25A6	P12236	298 aa		3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	CXCL3	P19876	107 aa		3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	HOXA5	P20719	270 aa		3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	AP2S1	P53680	142 aa	Predicted RBP	3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	PLP1	P60201	277 aa		3.09	□□□□□ -1.91
PPP4R1-209	ENST00000578329	KRTAP10-2	P60368	255 aa		3.09	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms