RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 NDUFA11Q86Y39 141 aa6.15□□□□□ -1.42
COPS3-215ENST00000578317 GPHB5Q86YW7 130 aa6.15□□□□□ -1.42
COPS3-215ENST00000578317 Q8WTZ3 238 aa6.15□□□□□ -1.42
COPS3-215ENST00000578317 CITED2Q99967 270 aaPredicted RBP6.15□□□□□ -1.42
COPS3-215ENST00000578317 CHRDL1Q9BU40 450 aa6.15□□□□□ -1.42
COPS3-215ENST00000578317 C19orf24Q9BVV8 132 aa6.15□□□□□ -1.42
COPS3-215ENST00000578317 S4R3C0 116 aa6.15□□□□□ -1.42
COPS3-215ENST00000578317 ANK2Q01484 3957 aa6.15□□□□□ -1.43
COPS3-215ENST00000578317 UMAD1C9J7I0 102 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 TRBV12-3P01733 135 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 IGHV3-23P01764 117 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 MBP02144 154 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 PSG1P11464 419 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 DEFA5Q01523 94 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 TIGITQ495A1 244 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 ZNF600Q6ZNG1 722 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 TMEM182Q6ZP80 229 aaPredicted RBP6.14□□□□□ -1.43
COPS3-215ENST00000578317 Q6ZRG5 221 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 HSD17B11Q8NBQ5 300 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 BPIFCQ8NFQ6 507 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 OR51G1Q8NGK1 321 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 ZNF414Q96IQ9 312 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 CITED1Q99966 193 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 RSG1Q9BU20 258 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 WI2-2373I1.2A0A1W2PRP0 233 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 BMPR1BO00238 502 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 NDUFA4O00483 81 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 ZP3P21754 424 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 ARL3P36405 182 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 RAB5CP51148 216 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 ZNF616Q08AN1 781 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 FAM106AQ4KMX7 169 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 TEX261Q6UWH6 196 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 ZNF747Q9BV97 191 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 SLC39A9Q9NUM3 307 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 PXMP4Q9Y6I8 212 aa6.14□□□□□ -1.43
COPS3-215ENST00000578317 DNHD1Q96M86 4753 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 PPP5D1E7EU14 171 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 F5H697 171 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 LINC01619G3V211 115 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 K7EMT4 169 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 LGALS9O00182 355 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 TRIAP1O43715 76 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 GATA2P23769 480 aaPredicted RBP6.13□□□□□ -1.43
COPS3-215ENST00000578317 B2MP61769 119 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 FHL3Q13643 280 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 KLF5Q13887 457 aaPredicted RBP6.13□□□□□ -1.43
COPS3-215ENST00000578317 MIC13Q5XKP0 118 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 TOMM20LQ6UXN7 152 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 S100A7AQ86SG5 101 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 C11orf44Q8N8P7 122 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 KLHL30-AS1Q8NEE0 82 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 ZNF680Q8NEM1 530 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 OR1N2Q8NGR9 330 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 GATAD1Q8WUU5 269 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 OR5B12Q96R08 314 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 SH3BGRL3Q9H299 93 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 DNAJC4Q9NNZ3 241 aa6.13□□□□□ -1.43
COPS3-215ENST00000578317 MRPL27Q9P0M9 148 aaKnown RBP6.13□□□□□ -1.43
COPS3-215ENST00000578317 PUS1Q9Y606 427 aaKnown RBP eCLIP6.13□□□□□ -1.43
COPS3-215ENST00000578317 PRSS47A8MTI9 375 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 CCL24O00175 119 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 HYPMO75409 117 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 YIF1AO95070 293 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 M6PRP20645 277 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 S100A7P31151 101 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 MYCNOSP40205 109 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 SULT1A2P50226 295 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 ELLP55199 621 aaPredicted RBP6.12□□□□□ -1.43
COPS3-215ENST00000578317 ACOT6Q3I5F7 207 aaPredicted RBP6.12□□□□□ -1.43
COPS3-215ENST00000578317 FFAR4Q5NUL3 377 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 DPPA3Q6W0C5 159 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 C18orf65Q6ZTR6 163 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 OR11H1Q8NG94 326 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 OR1L4Q8NGR5 311 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 TMED6Q8WW62 240 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 TMEM37Q8WXS4 190 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 DPF1Q92782 380 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 RNF125Q96EQ8 232 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 PFDN5Q99471 154 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 RPRMQ9NS64 109 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 RNF24Q9Y225 148 aa6.12□□□□□ -1.43
COPS3-215ENST00000578317 IGHV4OR15-8A0A075B7B6 117 aa6.11□□□□□ -1.43
COPS3-215ENST00000578317 A0A087WW49 117 aa6.11□□□□□ -1.43
COPS3-215ENST00000578317 IFNA7P01567 189 aa6.11□□□□□ -1.43
COPS3-215ENST00000578317 IL4P05112 153 aa6.11□□□□□ -1.43
COPS3-215ENST00000578317 HOXD3P31249 432 aaPredicted RBP6.11□□□□□ -1.43
COPS3-215ENST00000578317 RIPPLY3P57055 190 aa6.11□□□□□ -1.43
COPS3-215ENST00000578317 RPEL1Q2QD12 228 aa6.11□□□□□ -1.43
COPS3-215ENST00000578317 CFAP161Q6P656 301 aa6.11□□□□□ -1.43
COPS3-215ENST00000578317 PATE2Q6UY27 113 aa6.11□□□□□ -1.43
COPS3-215ENST00000578317 RPP25LQ8N5L8 163 aaKnown RBP6.11□□□□□ -1.43
COPS3-215ENST00000578317 TMEM190Q8WZ59 177 aa6.11□□□□□ -1.43
COPS3-215ENST00000578317 RNF2Q99496 336 aa6.11□□□□□ -1.43
COPS3-215ENST00000578317 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
COPS3-215ENST00000578317 RFNGQ9Y644 331 aa6.11□□□□□ -1.43
COPS3-215ENST00000578317 TRRAPQ9Y4A5 3859 aa6.11□□□□□ -1.43
COPS3-215ENST00000578317 SEC14L6B5MCN3 397 aa6.1□□□□□ -1.43
COPS3-215ENST00000578317 OR5G3P0C626 314 aa6.1□□□□□ -1.43
COPS3-215ENST00000578317 ORM2P19652 201 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms