RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 A0A1B0GU03 582 aa8.12□□□□□ -1.11
SMARCE1-214ENST00000578112 NBEAP1P0C6P0 100 aa8.12□□□□□ -1.11
SMARCE1-214ENST00000578112 PHLDA2Q53GA4 152 aa8.12□□□□□ -1.11
SMARCE1-214ENST00000578112 RNASE10Q5GAN6 216 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-214ENST00000578112 C12orf45Q8N5I9 185 aaPredicted RBP8.12□□□□□ -1.11
SMARCE1-214ENST00000578112 RBPMSQ93062 196 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-214ENST00000578112 PINX1Q96BK5 328 aaKnown RBP8.12□□□□□ -1.11
SMARCE1-214ENST00000578112 MIXL1Q9H2W2 232 aa8.12□□□□□ -1.11
SMARCE1-214ENST00000578112 BOLA1Q9Y3E2 137 aa8.12□□□□□ -1.11
SMARCE1-214ENST00000578112 IGHV3-49A0A0A0MS15 119 aa8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 MEIS3P1A6NDR6 274 aa8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 CD74P04233 296 aa8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 C4BPBP20851 252 aa8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 FGF8P55075 233 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 SNRPD3P62318 126 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 RPL11P62913 178 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 SAMD12Q8N8I0 201 aa8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 Q8WTZ3 238 aa8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 TMEM230Q96A57 120 aa8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 ST6GAL2Q96JF0 529 aa8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 ELOA3CA0A087WX78 387 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 TEX13DA0A0J9YY54 714 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 CBY3A6NI87 242 aa8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 APOHP02749 345 aaPredicted RBP8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 RPS19P39019 145 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 LEMD1Q68G75 181 aa8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 Q6ZTC4 211 aa8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 COMMD7Q86VX2 200 aa8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 LHFPL1Q86WI0 220 aa8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 RRNAD1Q96FB5 475 aaKnown RBP8.11□□□□□ -1.11
SMARCE1-214ENST00000578112 IGKV3-7A0A075B6H7 116 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 DEFB131BA0A096LNP1 70 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 H3BMQ9 156 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 ZNF25P17030 456 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 C2orf83Q53S99 150 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 SOHLH1Q5JUK2 328 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 DNLZQ5SXM8 178 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 FAM24BQ8N5W8 94 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 STXBP6Q8NFX7 210 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 ABHD1Q96SE0 405 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 MCUBQ9NWR8 336 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 IFNA17P01571 189 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 RLN2P04090 185 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 UCP1P25874 307 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 NKX2-1P43699 371 aaPredicted RBP8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 SSBP1Q04837 148 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 DHRS2Q13268 280 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 BAK1Q16611 211 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 DEDD2Q8WXF8 326 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 RAB40CQ96S21 281 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 C7orf50Q9BRJ6 194 aaKnown RBP8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 RNF167Q9H6Y7 350 aa8.1□□□□□ -1.11
SMARCE1-214ENST00000578112 VPS13DQ5THJ4 4388 aa8.09□□□□□ -1.11
SMARCE1-214ENST00000578112 PRSS29PA6NIE9 313 aa8.09□□□□□ -1.11
SMARCE1-214ENST00000578112 IGKV1-5P01602 117 aa8.09□□□□□ -1.11
SMARCE1-214ENST00000578112 SPART-AS1P0CW21 52 aa8.09□□□□□ -1.11
SMARCE1-214ENST00000578112 HLA-DMAP28067 261 aa8.09□□□□□ -1.11
SMARCE1-214ENST00000578112 OPRK1P41145 380 aa8.09□□□□□ -1.11
SMARCE1-214ENST00000578112 AKR1C2P52895 323 aa8.09□□□□□ -1.11
SMARCE1-214ENST00000578112 C12orf74Q32Q52 190 aa8.09□□□□□ -1.11
SMARCE1-214ENST00000578112 C9orf62Q8N4C0 152 aa8.09□□□□□ -1.11
SMARCE1-214ENST00000578112 EIF4E3Q8N5X7 224 aaKnown RBP8.09□□□□□ -1.11
SMARCE1-214ENST00000578112 YIPF6Q96EC8 236 aa8.09□□□□□ -1.11
SMARCE1-214ENST00000578112 PIGBOS1A0A0B4J2F0 54 aa8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 C3orf85A0A1B0GTC6 90 aa8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 DHODHQ02127 395 aa8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 GUK1Q16774 197 aa8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 CLLU1Q5K131 121 aa8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 OR8G2PQ6IF36 304 aa8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 ZNF705AQ6ZN79 300 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 S100A7AQ86SG5 101 aa8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 TMEM208Q9BTX3 173 aa8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 PGPEP1Q9NXJ5 209 aa8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 RFNGQ9Y644 331 aa8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 IGHV3OR16-13A0A075B7E8 117 aa8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 IGHV3-74A0A0B4J1X5 117 aa8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 IGKV1-17P01599 117 aa8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 HLA-DRB4P13762 266 aa8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 SURF2Q15527 256 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 NRN1Q9NPD7 142 aa8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 HLA-DRB4X5D2U9 266 aa8.08□□□□□ -1.12
SMARCE1-214ENST00000578112 HECTD4Q9Y4D8 3996 aa8.07□□□□□ -1.12
SMARCE1-214ENST00000578112 K7EP13 123 aa8.07□□□□□ -1.12
SMARCE1-214ENST00000578112 DEFB4AO15263 64 aa8.07□□□□□ -1.12
SMARCE1-214ENST00000578112 TOMM40O96008 361 aa8.07□□□□□ -1.12
SMARCE1-214ENST00000578112 ZNF688P0C7X2 276 aa8.07□□□□□ -1.12
SMARCE1-214ENST00000578112 IGLC1P0CG04 106 aa8.07□□□□□ -1.12
SMARCE1-214ENST00000578112 PGAM2P15259 253 aa8.07□□□□□ -1.12
SMARCE1-214ENST00000578112 ANXA7P20073 488 aaKnown RBP8.07□□□□□ -1.12
SMARCE1-214ENST00000578112 DDTP30046 118 aa8.07□□□□□ -1.12
SMARCE1-214ENST00000578112 PIGPP57054 158 aa8.07□□□□□ -1.12
SMARCE1-214ENST00000578112 ACTL10Q5JWF8 245 aa8.07□□□□□ -1.12
SMARCE1-214ENST00000578112 FNDC4Q9H6D8 234 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-214ENST00000578112 TNFRSF18Q9Y5U5 241 aa8.07□□□□□ -1.12
SMARCE1-214ENST00000578112 KNCNA6PVL3 124 aa8.07□□□□□ -1.12
SMARCE1-214ENST00000578112 ZNF705FA8MVS1 300 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-214ENST00000578112 H3BMM0 161 aa8.07□□□□□ -1.12
SMARCE1-214ENST00000578112 ZNF705DP0CH99 300 aaPredicted RBP8.07□□□□□ -1.12
SMARCE1-214ENST00000578112 ZNF705BP0CI00 300 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms