RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 Q6ZSV7 163 aa14.38□□□□□ -0.11
PRKCA-203ENST00000578063 STXBP6Q8NFX7 210 aa14.38□□□□□ -0.11
PRKCA-203ENST00000578063 OR5AU1Q8NGC0 362 aa14.38□□□□□ -0.11
PRKCA-203ENST00000578063 FAM167A-AS1Q96KT0 104 aa14.38□□□□□ -0.11
PRKCA-203ENST00000578063 RARRES2Q99969 163 aa14.38□□□□□ -0.11
PRKCA-203ENST00000578063 SLC25A2Q9BXI2 301 aa14.38□□□□□ -0.11
PRKCA-203ENST00000578063 GNB4Q9HAV0 340 aa14.38□□□□□ -0.11
PRKCA-203ENST00000578063 TMEM167BQ9NRX6 74 aa14.38□□□□□ -0.11
PRKCA-203ENST00000578063 PUS1Q9Y606 427 aaKnown RBP eCLIP14.38□□□□□ -0.11
PRKCA-203ENST00000578063 TMEM218A2RU14 115 aa14.37□□□□□ -0.11
PRKCA-203ENST00000578063 ICAM4Q14773 271 aa14.37□□□□□ -0.11
PRKCA-203ENST00000578063 MORN5Q5VZ52 161 aa14.37□□□□□ -0.11
PRKCA-203ENST00000578063 ZNF343Q6P1L6 599 aa14.37□□□□□ -0.11
PRKCA-203ENST00000578063 VAX2Q9UIW0 290 aa14.37□□□□□ -0.11
PRKCA-203ENST00000578063 HSPB1P04792 205 aaKnown RBP14.36□□□□□ -0.11
PRKCA-203ENST00000578063 RNF152Q8N8N0 203 aa14.36□□□□□ -0.11
PRKCA-203ENST00000578063 SLC25A39Q9BZJ4 359 aaPredicted RBP14.36□□□□□ -0.11
PRKCA-203ENST00000578063 MTORP42345 2549 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 TRAV5A0A0B4J249 113 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 BMPR1BO00238 502 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 S100A7P31151 101 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 ARL3P36405 182 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 USF2Q15853 346 aaPredicted RBP14.35□□□□□ -0.11
PRKCA-203ENST00000578063 C10orf99Q6UWK7 81 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 LCNL1Q6ZST4 164 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 RXFP4Q8TDU9 374 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 LINC00052Q96N35 136 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 SHANK2-AS3Q9BTD1 123 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 C9JQL5 133 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 H3BRN7 92 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 IGHV3-11P01762 117 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 SFTA3P0C7M3 94 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 OR4X2Q8NGF9 303 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 MYOZ3Q8TDC0 251 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 ZNF503Q96F45 646 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 SLC35B3Q9H1N7 401 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 RNF24Q9Y225 148 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 ARL2-SNX15V9GYD0 113 aa14.35□□□□□ -0.11
PRKCA-203ENST00000578063 PPP5D1E7EU14 171 aa14.34□□□□□ -0.11
PRKCA-203ENST00000578063 NDUFS6O75380 124 aaKnown RBP14.34□□□□□ -0.11
PRKCA-203ENST00000578063 UBE2L3P68036 154 aaKnown RBP14.34□□□□□ -0.11
PRKCA-203ENST00000578063 MEF2BQ02080 365 aaPredicted RBP14.34□□□□□ -0.11
PRKCA-203ENST00000578063 TOMM20LQ6UXN7 152 aa14.34□□□□□ -0.11
PRKCA-203ENST00000578063 SUN5Q8TC36 379 aa14.34□□□□□ -0.11
PRKCA-203ENST00000578063 ZNF414Q96IQ9 312 aa14.34□□□□□ -0.11
PRKCA-203ENST00000578063 PAXXQ9BUH6 204 aa14.34□□□□□ -0.11
PRKCA-203ENST00000578063 OR51M1Q9H341 326 aa14.34□□□□□ -0.11
PRKCA-203ENST00000578063 ZFAND3Q9H8U3 227 aa14.34□□□□□ -0.11
PRKCA-203ENST00000578063 PAGE4O60829 102 aa14.33□□□□□ -0.12
PRKCA-203ENST00000578063 KIAA0141Q14154 515 aaPredicted RBP14.33□□□□□ -0.12
PRKCA-203ENST00000578063 TXNDC17Q9BRA2 123 aa14.33□□□□□ -0.12
PRKCA-203ENST00000578063 RABAC1Q9UI14 185 aa14.33□□□□□ -0.12
PRKCA-203ENST00000578063 RPLP1P05386 114 aaKnown RBP14.32□□□□□ -0.12
PRKCA-203ENST00000578063 KLHDC1Q8N7A1 406 aa14.32□□□□□ -0.12
PRKCA-203ENST00000578063 IGHV3-35A0A0C4DH35 117 aa14.32□□□□□ -0.12
PRKCA-203ENST00000578063 F8W036 122 aa14.32□□□□□ -0.12
PRKCA-203ENST00000578063 TRBV12-3P01733 135 aa14.32□□□□□ -0.12
PRKCA-203ENST00000578063 SRP19P09132 144 aaKnown RBP14.32□□□□□ -0.12
PRKCA-203ENST00000578063 OR10J4P0C629 311 aa14.32□□□□□ -0.12
PRKCA-203ENST00000578063 UBE2G2P60604 165 aa14.32□□□□□ -0.12
PRKCA-203ENST00000578063 SEC11CQ9BY50 192 aa14.32□□□□□ -0.12
PRKCA-203ENST00000578063 C16orf95Q9H693 158 aa14.32□□□□□ -0.12
PRKCA-203ENST00000578063 TMEM14CQ9P0S9 112 aa14.32□□□□□ -0.12
PRKCA-203ENST00000578063 PEF1Q9UBV8 284 aaKnown RBP14.32□□□□□ -0.12
PRKCA-203ENST00000578063 CRLF1O75462 422 aa14.31□□□□□ -0.12
PRKCA-203ENST00000578063 GP9P14770 177 aa14.31□□□□□ -0.12
PRKCA-203ENST00000578063 UBE2E2Q96LR5 201 aa14.31□□□□□ -0.12
PRKCA-203ENST00000578063 ZNF98A6NK75 572 aa14.3□□□□□ -0.12
PRKCA-203ENST00000578063 C11orf94C9JXX5 98 aa14.3□□□□□ -0.12
PRKCA-203ENST00000578063 NDUFA4O00483 81 aa14.3□□□□□ -0.12
PRKCA-203ENST00000578063 GGCTO75223 188 aaKnown RBP14.3□□□□□ -0.12
PRKCA-203ENST00000578063 PYYP10082 97 aa14.3□□□□□ -0.12
PRKCA-203ENST00000578063 ADCYAP1P18509 176 aa14.3□□□□□ -0.12
PRKCA-203ENST00000578063 CD81P60033 236 aa14.3□□□□□ -0.12
PRKCA-203ENST00000578063 CST9LP1Q5W188 147 aa14.3□□□□□ -0.12
PRKCA-203ENST00000578063 LEMD1Q68G75 181 aa14.3□□□□□ -0.12
PRKCA-203ENST00000578063 FXYD5Q96DB9 178 aa14.3□□□□□ -0.12
PRKCA-203ENST00000578063 NSD1Q96L73 2696 aaPredicted RBP14.3□□□□□ -0.12
PRKCA-203ENST00000578063 FAM74A7A6NL05 159 aa14.29□□□□□ -0.12
PRKCA-203ENST00000578063 CYSRT1A8MQ03 144 aa14.29□□□□□ -0.12
PRKCA-203ENST00000578063 TCF21O43680 179 aa14.29□□□□□ -0.12
PRKCA-203ENST00000578063 LGALS1P09382 135 aaKnown RBP14.29□□□□□ -0.12
PRKCA-203ENST00000578063 C10orf91Q5T1B1 145 aa14.29□□□□□ -0.12
PRKCA-203ENST00000578063 BPIFA4PQ86YQ2 179 aa14.29□□□□□ -0.12
PRKCA-203ENST00000578063 OR4F5Q8NH21 305 aa14.29□□□□□ -0.12
PRKCA-203ENST00000578063 OR4F4Q96R69 305 aa14.29□□□□□ -0.12
PRKCA-203ENST00000578063 CARHSP1Q9Y2V2 147 aaKnown RBP14.29□□□□□ -0.12
PRKCA-203ENST00000578063 YTHDF2Q9Y5A9 579 aaKnown RBP14.29□□□□□ -0.12
PRKCA-203ENST00000578063 A0A1W2PRE2 83 aa14.29□□□□□ -0.12
PRKCA-203ENST00000578063 TMEM250H0YL14 139 aa14.29□□□□□ -0.12
PRKCA-203ENST00000578063 NDUFA7O95182 113 aa14.29□□□□□ -0.12
PRKCA-203ENST00000578063 CYB561D1Q8N8Q1 229 aa14.29□□□□□ -0.12
PRKCA-203ENST00000578063 METTL26Q96S19 204 aa14.29□□□□□ -0.12
PRKCA-203ENST00000578063 PDE6DO43924 150 aa14.28□□□□□ -0.12
PRKCA-203ENST00000578063 ATP5G3P48201 142 aa14.28□□□□□ -0.12
PRKCA-203ENST00000578063 SOHLH1Q5JUK2 328 aa14.28□□□□□ -0.12
PRKCA-203ENST00000578063 OR5B12Q96R08 314 aa14.28□□□□□ -0.12
PRKCA-203ENST00000578063 CLPSL1A2RUU4 121 aa14.27□□□□□ -0.12
PRKCA-203ENST00000578063 OR4F17Q8NGA8 305 aa14.27□□□□□ -0.12
PRKCA-203ENST00000578063 NKX6-2Q9C056 277 aaPredicted RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms