RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 SLC25A22Q9H936 323 aa11.28□□□□□ -0.6
SMG6-220ENST00000576218 EDA2RQ9HAV5 297 aa11.28□□□□□ -0.6
SMG6-220ENST00000576218 C7orf66A4D0T2 115 aa11.27□□□□□ -0.61
SMG6-220ENST00000576218 INMT-MINDY4F8WBC2 141 aa11.27□□□□□ -0.61
SMG6-220ENST00000576218 K7EPK0 472 aa11.27□□□□□ -0.61
SMG6-220ENST00000576218 PRAF2O60831 178 aa11.27□□□□□ -0.61
SMG6-220ENST00000576218 CCNKO75909 580 aa11.27□□□□□ -0.61
SMG6-220ENST00000576218 CA1P00915 261 aaPredicted RBP11.27□□□□□ -0.61
SMG6-220ENST00000576218 RAP2BP61225 183 aa11.27□□□□□ -0.61
SMG6-220ENST00000576218 ACTL10Q5JWF8 245 aa11.27□□□□□ -0.61
SMG6-220ENST00000576218 TMEM14EPQ6UXP3 125 aa11.27□□□□□ -0.61
SMG6-220ENST00000576218 CYP2G1PQ6ZSU1 146 aa11.27□□□□□ -0.61
SMG6-220ENST00000576218 NRARPQ7Z6K4 114 aa11.27□□□□□ -0.61
SMG6-220ENST00000576218 DCANP1Q8TF63 244 aa11.27□□□□□ -0.61
SMG6-220ENST00000576218 DOK5Q9P104 306 aa11.27□□□□□ -0.61
SMG6-220ENST00000576218 TP53TG1Q9Y2A0 90 aa11.27□□□□□ -0.61
SMG6-220ENST00000576218 GOSR2O14653 212 aa11.26□□□□□ -0.61
SMG6-220ENST00000576218 GATA2P23769 480 aaPredicted RBP11.26□□□□□ -0.61
SMG6-220ENST00000576218 ID1P41134 155 aa11.26□□□□□ -0.61
SMG6-220ENST00000576218 GALR1P47211 349 aa11.26□□□□□ -0.61
SMG6-220ENST00000576218 PAX9P55771 341 aa11.26□□□□□ -0.61
SMG6-220ENST00000576218 IFITM3Q01628 133 aa11.26□□□□□ -0.61
SMG6-220ENST00000576218 C1orf194Q5T5A4 169 aa11.26□□□□□ -0.61
SMG6-220ENST00000576218 TEPPQ6URK8 271 aa11.26□□□□□ -0.61
SMG6-220ENST00000576218 S100A7AQ86SG5 101 aa11.26□□□□□ -0.61
SMG6-220ENST00000576218 NPVFQ9HCQ7 196 aa11.26□□□□□ -0.61
SMG6-220ENST00000576218 KNCNA6PVL3 124 aa11.25□□□□□ -0.61
SMG6-220ENST00000576218 SSNA1O43805 119 aa11.25□□□□□ -0.61
SMG6-220ENST00000576218 OR5G3P0C626 314 aa11.25□□□□□ -0.61
SMG6-220ENST00000576218 LINC00869P0C866 280 aa11.25□□□□□ -0.61
SMG6-220ENST00000576218 SELENOTP62341 195 aa11.25□□□□□ -0.61
SMG6-220ENST00000576218 SLC38A11Q08AI6 406 aa11.25□□□□□ -0.61
SMG6-220ENST00000576218 CASC10Q5T4H9 136 aa11.25□□□□□ -0.61
SMG6-220ENST00000576218 STX12Q86Y82 276 aa11.25□□□□□ -0.61
SMG6-220ENST00000576218 RNF183Q96D59 192 aa11.25□□□□□ -0.61
SMG6-220ENST00000576218 LINC00052Q96N35 136 aa11.25□□□□□ -0.61
SMG6-220ENST00000576218 SLC45A2Q9UMX9 530 aa11.25□□□□□ -0.61
SMG6-220ENST00000576218 PMS2P5A8MQ11 134 aa11.24□□□□□ -0.61
SMG6-220ENST00000576218 FNDC10F2Z333 226 aa11.24□□□□□ -0.61
SMG6-220ENST00000576218 HYPMO75409 117 aa11.24□□□□□ -0.61
SMG6-220ENST00000576218 RLN2P04090 185 aa11.24□□□□□ -0.61
SMG6-220ENST00000576218 RAB32Q13637 225 aa11.24□□□□□ -0.61
SMG6-220ENST00000576218 TMEM217Q8N7C4 229 aa11.24□□□□□ -0.61
SMG6-220ENST00000576218 HIGD1AQ9Y241 93 aa11.24□□□□□ -0.61
SMG6-220ENST00000576218 FAM24AA6NFZ4 105 aa11.23□□□□□ -0.61
SMG6-220ENST00000576218 CST7O76096 145 aa11.23□□□□□ -0.61
SMG6-220ENST00000576218 HBG1P69891 147 aa11.23□□□□□ -0.61
SMG6-220ENST00000576218 HBG2P69892 147 aa11.23□□□□□ -0.61
SMG6-220ENST00000576218 RAB31Q13636 194 aa11.23□□□□□ -0.61
SMG6-220ENST00000576218 SAMD13Q5VXD3 122 aa11.23□□□□□ -0.61
SMG6-220ENST00000576218 MORN3Q6PF18 240 aaPredicted RBP11.23□□□□□ -0.61
SMG6-220ENST00000576218 ZNF546Q86UE3 836 aa11.23□□□□□ -0.61
SMG6-220ENST00000576218 GATAD1Q8WUU5 269 aa11.23□□□□□ -0.61
SMG6-220ENST00000576218 C16orf92Q96LL3 132 aa11.23□□□□□ -0.61
SMG6-220ENST00000576218 GPR82Q96P67 336 aa11.23□□□□□ -0.61
SMG6-220ENST00000576218 GGACTQ9BVM4 153 aa11.23□□□□□ -0.61
SMG6-220ENST00000576218 A0A0J9YWU9 116 aa11.22□□□□□ -0.61
SMG6-220ENST00000576218 ZNF98A6NK75 572 aa11.22□□□□□ -0.61
SMG6-220ENST00000576218 DEDDO75618 318 aa11.22□□□□□ -0.61
SMG6-220ENST00000576218 SIX6O95475 246 aa11.22□□□□□ -0.61
SMG6-220ENST00000576218 SPP1P10451 314 aa11.22□□□□□ -0.61
SMG6-220ENST00000576218 ATF4P18848 351 aaPredicted RBP11.22□□□□□ -0.61
SMG6-220ENST00000576218 MEOX2P50222 304 aa11.22□□□□□ -0.61
SMG6-220ENST00000576218 NUTF2P61970 127 aaKnown RBP11.22□□□□□ -0.61
SMG6-220ENST00000576218 FGL1Q08830 312 aa11.22□□□□□ -0.61
SMG6-220ENST00000576218 LRRC37A5PQ49AS3 106 aa11.22□□□□□ -0.61
SMG6-220ENST00000576218 TMEM182Q6ZP80 229 aaPredicted RBP11.22□□□□□ -0.61
SMG6-220ENST00000576218 RARRES2Q99969 163 aa11.22□□□□□ -0.61
SMG6-220ENST00000576218 ARL6Q9H0F7 186 aa11.22□□□□□ -0.61
SMG6-220ENST00000576218 SLC25A32Q9H2D1 315 aa11.22□□□□□ -0.61
SMG6-220ENST00000576218 SEPSECSQ9HD40 501 aaKnown RBP11.22□□□□□ -0.61
SMG6-220ENST00000576218 LYRM2Q9NU23 88 aaPredicted RBP11.22□□□□□ -0.61
SMG6-220ENST00000576218 PSMB3P49720 205 aa11.21□□□□□ -0.61
SMG6-220ENST00000576218 SULT1A1P50225 295 aa11.21□□□□□ -0.61
SMG6-220ENST00000576218 CYCSP99999 105 aaKnown RBP11.21□□□□□ -0.61
SMG6-220ENST00000576218 BAXQ07812 192 aa11.21□□□□□ -0.61
SMG6-220ENST00000576218 ARL16Q0P5N6 197 aa11.21□□□□□ -0.61
SMG6-220ENST00000576218 TMEM41BQ5BJD5 291 aa11.21□□□□□ -0.61
SMG6-220ENST00000576218 TRPT1Q86TN4 253 aaKnown RBP11.21□□□□□ -0.61
SMG6-220ENST00000576218 OR11H2Q8NH07 326 aa11.21□□□□□ -0.61
SMG6-220ENST00000576218 RSG1Q9BU20 258 aa11.21□□□□□ -0.61
SMG6-220ENST00000576218 SCRT1Q9BWW7 348 aa11.21□□□□□ -0.61
SMG6-220ENST00000576218 SLC25A39Q9BZJ4 359 aaPredicted RBP11.21□□□□□ -0.61
SMG6-220ENST00000576218 UQCC1Q9NVA1 299 aa11.21□□□□□ -0.61
SMG6-220ENST00000576218 RNF24Q9Y225 148 aa11.21□□□□□ -0.61
SMG6-220ENST00000576218 UBE2L5PA0A1B0GUS4 154 aa11.2□□□□□ -0.62
SMG6-220ENST00000576218 CXorf65A6NEN9 183 aa11.2□□□□□ -0.62
SMG6-220ENST00000576218 AGPAT2O15120 278 aa11.2□□□□□ -0.62
SMG6-220ENST00000576218 COX7A2P2O60397 106 aa11.2□□□□□ -0.62
SMG6-220ENST00000576218 RPL7P18124 248 aaKnown RBP11.2□□□□□ -0.62
SMG6-220ENST00000576218 S100A11P31949 105 aa11.2□□□□□ -0.62
SMG6-220ENST00000576218 LRRC20Q8TCA0 184 aa11.2□□□□□ -0.62
SMG6-220ENST00000576218 MARVELD1Q9BSK0 173 aa11.2□□□□□ -0.62
SMG6-220ENST00000576218 HUWE1Q7Z6Z7 4374 aaKnown RBP11.2□□□□□ -0.62
SMG6-220ENST00000576218 H3BRN7 92 aa11.19□□□□□ -0.62
SMG6-220ENST00000576218 ISLRO14498 428 aa11.19□□□□□ -0.62
SMG6-220ENST00000576218 CAMLGP49069 296 aa11.19□□□□□ -0.62
SMG6-220ENST00000576218 PMS2P11Q13670 270 aa11.19□□□□□ -0.62
SMG6-220ENST00000576218 PXDC1Q5TGL8 231 aa11.19□□□□□ -0.62
SMG6-220ENST00000576218 EBLN2Q6P2I7 272 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms