RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SLC24A4Q8NFF2 622 aa11.19□□□□□ -0.62
CTDNEP1-211ENST00000575783 ZNF503Q96F45 646 aa11.19□□□□□ -0.62
CTDNEP1-211ENST00000575783 NOP10Q9NPE3 64 aaKnown RBP11.19□□□□□ -0.62
CTDNEP1-211ENST00000575783 TIMM8BQ9Y5J9 83 aaPredicted RBP11.19□□□□□ -0.62
CTDNEP1-211ENST00000575783 LOC100506127A0A0U1RQW1 187 aa11.18□□□□□ -0.62
CTDNEP1-211ENST00000575783 C3orf85A0A1B0GTC6 90 aa11.18□□□□□ -0.62
CTDNEP1-211ENST00000575783 CEBPZOSA8MTT3 80 aa11.18□□□□□ -0.62
CTDNEP1-211ENST00000575783 A8MTW9 85 aa11.18□□□□□ -0.62
CTDNEP1-211ENST00000575783 DNAH10OSP0CZ25 163 aa11.18□□□□□ -0.62
CTDNEP1-211ENST00000575783 PIGPP57054 158 aa11.18□□□□□ -0.62
CTDNEP1-211ENST00000575783 SPARTQ8N0X7 666 aa11.18□□□□□ -0.62
CTDNEP1-211ENST00000575783 TMEM170AQ8WVE7 144 aa11.18□□□□□ -0.62
CTDNEP1-211ENST00000575783 CNBD2Q96M20 576 aa11.18□□□□□ -0.62
CTDNEP1-211ENST00000575783 TNFRSF18Q9Y5U5 241 aa11.18□□□□□ -0.62
CTDNEP1-211ENST00000575783 ZNF701M0R085 212 aaPredicted RBP11.17□□□□□ -0.62
CTDNEP1-211ENST00000575783 DUSP14O95147 198 aaKnown RBP11.17□□□□□ -0.62
CTDNEP1-211ENST00000575783 RND3P61587 244 aa11.17□□□□□ -0.62
CTDNEP1-211ENST00000575783 LYZP61626 148 aa11.17□□□□□ -0.62
CTDNEP1-211ENST00000575783 ZNF90Q03938 601 aa11.17□□□□□ -0.62
CTDNEP1-211ENST00000575783 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.17□□□□□ -0.62
CTDNEP1-211ENST00000575783 ZFP92A6NM28 416 aa11.16□□□□□ -0.62
CTDNEP1-211ENST00000575783 GCSHP23434 173 aa11.16□□□□□ -0.62
CTDNEP1-211ENST00000575783 RCVRNP35243 200 aa11.16□□□□□ -0.62
CTDNEP1-211ENST00000575783 KLF9Q13886 244 aaPredicted RBP11.16□□□□□ -0.62
CTDNEP1-211ENST00000575783 UBE2NLQ5JXB2 153 aa11.16□□□□□ -0.62
CTDNEP1-211ENST00000575783 SERTAD4-AS1Q5TG53 156 aa11.16□□□□□ -0.62
CTDNEP1-211ENST00000575783 SAMD13Q5VXD3 122 aa11.16□□□□□ -0.62
CTDNEP1-211ENST00000575783 TMEM144Q7Z5S9 345 aa11.16□□□□□ -0.62
CTDNEP1-211ENST00000575783 OR10J6PQ8NGY7 276 aa11.16□□□□□ -0.62
CTDNEP1-211ENST00000575783 OR52E5Q8NH55 327 aa11.16□□□□□ -0.62
CTDNEP1-211ENST00000575783 NRG4Q8WWG1 115 aa11.16□□□□□ -0.62
CTDNEP1-211ENST00000575783 C16orf74Q96GX8 76 aa11.16□□□□□ -0.62
CTDNEP1-211ENST00000575783 RSG1Q9BU20 258 aa11.16□□□□□ -0.62
CTDNEP1-211ENST00000575783 SLC25A39Q9BZJ4 359 aaPredicted RBP11.16□□□□□ -0.62
CTDNEP1-211ENST00000575783 HOXA5P20719 270 aa11.15□□□□□ -0.62
CTDNEP1-211ENST00000575783 UCP1P25874 307 aa11.15□□□□□ -0.62
CTDNEP1-211ENST00000575783 MEOX2P50222 304 aa11.15□□□□□ -0.62
CTDNEP1-211ENST00000575783 TAS2R60P59551 318 aa11.15□□□□□ -0.62
CTDNEP1-211ENST00000575783 IGFL4Q6B9Z1 124 aa11.15□□□□□ -0.62
CTDNEP1-211ENST00000575783 SAMD12Q8N8I0 201 aa11.15□□□□□ -0.62
CTDNEP1-211ENST00000575783 SYT8Q8NBV8 401 aa11.15□□□□□ -0.62
CTDNEP1-211ENST00000575783 ZNF486Q96H40 463 aaPredicted RBP11.15□□□□□ -0.62
CTDNEP1-211ENST00000575783 A0A087WTM6 91 aa11.14□□□□□ -0.63
CTDNEP1-211ENST00000575783 SNRPGP15A8MWD9 76 aa11.14□□□□□ -0.63
CTDNEP1-211ENST00000575783 SIVA1O15304 175 aa11.14□□□□□ -0.63
CTDNEP1-211ENST00000575783 ZNF182P17025 639 aaPredicted RBP11.14□□□□□ -0.63
CTDNEP1-211ENST00000575783 OR2F1Q13607 317 aa11.14□□□□□ -0.63
CTDNEP1-211ENST00000575783 NOXA1Q86UR1 476 aa11.14□□□□□ -0.63
CTDNEP1-211ENST00000575783 GPX8Q8TED1 209 aa11.14□□□□□ -0.63
CTDNEP1-211ENST00000575783 KRTAP29-1A8MX34 341 aaPredicted RBP11.13□□□□□ -0.63
CTDNEP1-211ENST00000575783 GALR1P47211 349 aa11.13□□□□□ -0.63
CTDNEP1-211ENST00000575783 RHOBP62745 196 aa11.13□□□□□ -0.63
CTDNEP1-211ENST00000575783 AARDQ4LEZ3 155 aa11.13□□□□□ -0.63
CTDNEP1-211ENST00000575783 RNF182Q8N6D2 247 aa11.13□□□□□ -0.63
CTDNEP1-211ENST00000575783 SLC25A22Q9H936 323 aa11.13□□□□□ -0.63
CTDNEP1-211ENST00000575783 PPP1R14DQ9NXH3 145 aa11.13□□□□□ -0.63
CTDNEP1-211ENST00000575783 COPZ2Q9P299 210 aa11.13□□□□□ -0.63
CTDNEP1-211ENST00000575783 CACNG5Q9UF02 275 aa11.13□□□□□ -0.63
CTDNEP1-211ENST00000575783 GAGE12BA1L429 117 aa11.12□□□□□ -0.63
CTDNEP1-211ENST00000575783 BOLA2-SMG1P6H3BVE0 249 aa11.12□□□□□ -0.63
CTDNEP1-211ENST00000575783 ADAP1O75689 374 aa11.12□□□□□ -0.63
CTDNEP1-211ENST00000575783 GAGE7O76087 117 aa11.12□□□□□ -0.63
CTDNEP1-211ENST00000575783 GAGE12FP0CL80 117 aa11.12□□□□□ -0.63
CTDNEP1-211ENST00000575783 GAGE12GP0CL81 117 aa11.12□□□□□ -0.63
CTDNEP1-211ENST00000575783 GAGE12IP0CL82 117 aa11.12□□□□□ -0.63
CTDNEP1-211ENST00000575783 FAM219AQ8IW50 185 aa11.12□□□□□ -0.63
CTDNEP1-211ENST00000575783 TMEM256Q8N2U0 113 aa11.12□□□□□ -0.63
CTDNEP1-211ENST00000575783 SLC25A32Q9H2D1 315 aa11.12□□□□□ -0.63
CTDNEP1-211ENST00000575783 IGKV1D-37A0A075B6S9 117 aa11.11□□□□□ -0.63
CTDNEP1-211ENST00000575783 GAMTQ14353 236 aa11.11□□□□□ -0.63
CTDNEP1-211ENST00000575783 NMSQ5H8A3 153 aa11.11□□□□□ -0.63
CTDNEP1-211ENST00000575783 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.11□□□□□ -0.63
CTDNEP1-211ENST00000575783 ZNF493Q6ZR52 646 aa11.11□□□□□ -0.63
CTDNEP1-211ENST00000575783 SNX29P2Q8IUI4 249 aa11.11□□□□□ -0.63
CTDNEP1-211ENST00000575783 ARRDC1Q8N5I2 433 aa11.11□□□□□ -0.63
CTDNEP1-211ENST00000575783 RNASE8Q8TDE3 154 aaKnown RBP11.11□□□□□ -0.63
CTDNEP1-211ENST00000575783 H3BNG1 76 aa11.1□□□□□ -0.63
CTDNEP1-211ENST00000575783 TMEM127O75204 238 aa11.1□□□□□ -0.63
CTDNEP1-211ENST00000575783 FABP1P07148 127 aa11.1□□□□□ -0.63
CTDNEP1-211ENST00000575783 FGL1Q08830 312 aa11.1□□□□□ -0.63
CTDNEP1-211ENST00000575783 MEF2DQ14814 521 aa11.1□□□□□ -0.63
CTDNEP1-211ENST00000575783 NFE4Q86UQ8 179 aa11.1□□□□□ -0.63
CTDNEP1-211ENST00000575783 CCDC71LQ8N9Z2 235 aa11.1□□□□□ -0.63
CTDNEP1-211ENST00000575783 ZNF738Q8NE65 137 aa11.1□□□□□ -0.63
CTDNEP1-211ENST00000575783 TMEM263Q8WUH6 116 aaKnown RBP11.1□□□□□ -0.63
CTDNEP1-211ENST00000575783 LRP1Q07954 4544 aaKnown RBP11.1□□□□□ -0.63
CTDNEP1-211ENST00000575783 A0A096LPF7 62 aa11.09□□□□□ -0.63
CTDNEP1-211ENST00000575783 TRAV8-2A0A0B4J237 113 aa11.09□□□□□ -0.63
CTDNEP1-211ENST00000575783 GABARAPH6UMI1 98 aa11.09□□□□□ -0.63
CTDNEP1-211ENST00000575783 GABARAPO95166 117 aa11.09□□□□□ -0.63
CTDNEP1-211ENST00000575783 CDS2O95674 445 aa11.09□□□□□ -0.63
CTDNEP1-211ENST00000575783 GABARAPL2P60520 117 aa11.09□□□□□ -0.63
CTDNEP1-211ENST00000575783 HIST1H1AQ02539 215 aaPredicted RBP11.09□□□□□ -0.63
CTDNEP1-211ENST00000575783 SLC35E1Q96K37 410 aa11.09□□□□□ -0.63
CTDNEP1-211ENST00000575783 ZNF98A6NK75 572 aa11.08□□□□□ -0.64
CTDNEP1-211ENST00000575783 NXPH4O95158 308 aa11.08□□□□□ -0.64
CTDNEP1-211ENST00000575783 RLN2P04090 185 aa11.08□□□□□ -0.64
CTDNEP1-211ENST00000575783 OR5AC1P0C628 307 aa11.08□□□□□ -0.64
CTDNEP1-211ENST00000575783 PRB4P10163 310 aaPredicted RBP11.08□□□□□ -0.64
CTDNEP1-211ENST00000575783 LHFPL1Q86WI0 220 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms