RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 UHRF2Q96PU4 802 aa12.2□□□□□ -0.46
CCDC40-211ENST00000574099 TMEM222Q9H0R3 208 aa12.2□□□□□ -0.46
CCDC40-211ENST00000574099 IGKV1D-37A0A075B6S9 117 aa12.19□□□□□ -0.46
CCDC40-211ENST00000574099 PLAC8L1A1L4L8 177 aa12.19□□□□□ -0.46
CCDC40-211ENST00000574099 A8MTW9 85 aa12.19□□□□□ -0.46
CCDC40-211ENST00000574099 CRXO43186 299 aaPredicted RBP12.19□□□□□ -0.46
CCDC40-211ENST00000574099 HPGDSO60760 199 aa12.19□□□□□ -0.46
CCDC40-211ENST00000574099 CDS2O95674 445 aa12.19□□□□□ -0.46
CCDC40-211ENST00000574099 TTC32Q5I0X7 151 aa12.19□□□□□ -0.46
CCDC40-211ENST00000574099 C1orf194Q5T5A4 169 aa12.19□□□□□ -0.46
CCDC40-211ENST00000574099 TMEM268Q5VZI3 342 aa12.19□□□□□ -0.46
CCDC40-211ENST00000574099 NOXA1Q86UR1 476 aa12.19□□□□□ -0.46
CCDC40-211ENST00000574099 SELENOHQ8IZQ5 122 aaKnown RBP12.19□□□□□ -0.46
CCDC40-211ENST00000574099 OR11H7Q8NGC8 314 aa12.19□□□□□ -0.46
CCDC40-211ENST00000574099 TRAV12-2A0A075B6T6 113 aa12.18□□□□□ -0.46
CCDC40-211ENST00000574099 TNFAIP8O95379 198 aa12.18□□□□□ -0.46
CCDC40-211ENST00000574099 FUSP35637 526 aaKnown RBP eCLIP12.18□□□□□ -0.46
CCDC40-211ENST00000574099 CNN1P51911 297 aaKnown RBP12.18□□□□□ -0.46
CCDC40-211ENST00000574099 OR52I2Q8NH67 350 aa12.18□□□□□ -0.46
CCDC40-211ENST00000574099 GLYATL2Q8WU03 294 aa12.18□□□□□ -0.46
CCDC40-211ENST00000574099 TEX13DA0A0J9YY54 714 aaPredicted RBP12.17□□□□□ -0.46
CCDC40-211ENST00000574099 B3GALNT1O75752 331 aa12.17□□□□□ -0.46
CCDC40-211ENST00000574099 TSPOP30536 169 aa12.17□□□□□ -0.46
CCDC40-211ENST00000574099 IGFL4Q6B9Z1 124 aa12.17□□□□□ -0.46
CCDC40-211ENST00000574099 TERB2Q8NHR7 220 aa12.17□□□□□ -0.46
CCDC40-211ENST00000574099 SLC35E1Q96K37 410 aa12.17□□□□□ -0.46
CCDC40-211ENST00000574099 SLC25A32Q9H2D1 315 aa12.17□□□□□ -0.46
CCDC40-211ENST00000574099 Q9H3A6 140 aa12.17□□□□□ -0.46
CCDC40-211ENST00000574099 Q9H521 79 aa12.17□□□□□ -0.46
CCDC40-211ENST00000574099 NAA60Q9H7X0 242 aa12.17□□□□□ -0.46
CCDC40-211ENST00000574099 SLC25A22Q9H936 323 aa12.17□□□□□ -0.46
CCDC40-211ENST00000574099 CBY3A6NI87 242 aa12.16□□□□□ -0.46
CCDC40-211ENST00000574099 HTN1P15515 57 aa12.16□□□□□ -0.46
CCDC40-211ENST00000574099 BTF3P20290 206 aaKnown RBP12.16□□□□□ -0.46
CCDC40-211ENST00000574099 MEOX2P50222 304 aa12.16□□□□□ -0.46
CCDC40-211ENST00000574099 GAMTQ14353 236 aa12.16□□□□□ -0.46
CCDC40-211ENST00000574099 LGI3Q8N145 548 aa12.16□□□□□ -0.46
CCDC40-211ENST00000574099 SLC25A39Q9BZJ4 359 aaPredicted RBP12.16□□□□□ -0.46
CCDC40-211ENST00000574099 C14orf166Q9Y224 244 aaKnown RBP12.16□□□□□ -0.46
CCDC40-211ENST00000574099 SNRPGP15A8MWD9 76 aa12.15□□□□□ -0.46
CCDC40-211ENST00000574099 FAM25AB3EWG3 89 aa12.15□□□□□ -0.46
CCDC40-211ENST00000574099 FAM25CB3EWG5 89 aa12.15□□□□□ -0.46
CCDC40-211ENST00000574099 FAM25GB3EWG6 89 aa12.15□□□□□ -0.46
CCDC40-211ENST00000574099 SULT1A3P0DMM9 295 aa12.15□□□□□ -0.46
CCDC40-211ENST00000574099 SULT1A4P0DMN0 295 aa12.15□□□□□ -0.46
CCDC40-211ENST00000574099 GALR1P47211 349 aa12.15□□□□□ -0.46
CCDC40-211ENST00000574099 Q5VSD8 79 aa12.15□□□□□ -0.46
CCDC40-211ENST00000574099 SAMD13Q5VXD3 122 aa12.15□□□□□ -0.46
CCDC40-211ENST00000574099 FAAP20Q6NZ36 180 aa12.15□□□□□ -0.46
CCDC40-211ENST00000574099 RNF182Q8N6D2 247 aa12.15□□□□□ -0.46
CCDC40-211ENST00000574099 DTD1Q8TEA8 209 aa12.15□□□□□ -0.46
CCDC40-211ENST00000574099 C17orf77Q96MU5 243 aa12.15□□□□□ -0.46
CCDC40-211ENST00000574099 RSG1Q9BU20 258 aa12.15□□□□□ -0.46
CCDC40-211ENST00000574099 ZNF586Q9NXT0 402 aa12.15□□□□□ -0.46
CCDC40-211ENST00000574099 PRR13Q9NZ81 148 aa12.15□□□□□ -0.46
CCDC40-211ENST00000574099 GABARAPH6UMI1 98 aa12.14□□□□□ -0.47
CCDC40-211ENST00000574099 DUSP14O95147 198 aaKnown RBP12.14□□□□□ -0.47
CCDC40-211ENST00000574099 GABARAPO95166 117 aa12.14□□□□□ -0.47
CCDC40-211ENST00000574099 RAB3DO95716 219 aa12.14□□□□□ -0.47
CCDC40-211ENST00000574099 FABP1P07148 127 aa12.14□□□□□ -0.47
CCDC40-211ENST00000574099 TBPP20226 339 aa12.14□□□□□ -0.47
CCDC40-211ENST00000574099 B2MP61769 119 aa12.14□□□□□ -0.47
CCDC40-211ENST00000574099 OR5I1Q13606 314 aa12.14□□□□□ -0.47
CCDC40-211ENST00000574099 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.14□□□□□ -0.47
CCDC40-211ENST00000574099 LYPD1Q8N2G4 141 aa12.14□□□□□ -0.47
CCDC40-211ENST00000574099 YIPF6Q96EC8 236 aa12.14□□□□□ -0.47
CCDC40-211ENST00000574099 GNPNAT1Q96EK6 184 aaPredicted RBP12.14□□□□□ -0.47
CCDC40-211ENST00000574099 LINC01587Q99440 93 aa12.14□□□□□ -0.47
CCDC40-211ENST00000574099 RTBDNQ9BSG5 229 aaPredicted RBP12.14□□□□□ -0.47
CCDC40-211ENST00000574099 RBKSQ9H477 322 aa12.14□□□□□ -0.47
CCDC40-211ENST00000574099 U3KQ87 197 aa12.14□□□□□ -0.47
CCDC40-211ENST00000574099 FAT1Q14517 4588 aa12.13□□□□□ -0.47
CCDC40-211ENST00000574099 TRAV26-1A0A087WT03 109 aa12.13□□□□□ -0.47
CCDC40-211ENST00000574099 A0A0J9YY99 117 aa12.13□□□□□ -0.47
CCDC40-211ENST00000574099 BOLA2-SMG1P6H3BVE0 249 aa12.13□□□□□ -0.47
CCDC40-211ENST00000574099 NCS1P62166 190 aa12.13□□□□□ -0.47
CCDC40-211ENST00000574099 GPR141Q7Z602 305 aa12.13□□□□□ -0.47
CCDC40-211ENST00000574099 NOP10Q9NPE3 64 aaKnown RBP12.13□□□□□ -0.47
CCDC40-211ENST00000574099 MTFP1Q9UDX5 166 aa12.13□□□□□ -0.47
CCDC40-211ENST00000574099 PRB4P10163 310 aaPredicted RBP12.12□□□□□ -0.47
CCDC40-211ENST00000574099 ZNF182P17025 639 aaPredicted RBP12.12□□□□□ -0.47
CCDC40-211ENST00000574099 XGP55808 180 aa12.12□□□□□ -0.47
CCDC40-211ENST00000574099 LINC00315P59091 139 aa12.12□□□□□ -0.47
CCDC40-211ENST00000574099 FGL1Q08830 312 aa12.12□□□□□ -0.47
CCDC40-211ENST00000574099 ESRGQ1W209 222 aa12.12□□□□□ -0.47
CCDC40-211ENST00000574099 C16orf74Q96GX8 76 aa12.12□□□□□ -0.47
CCDC40-211ENST00000574099 TIMM8BQ9Y5J9 83 aaPredicted RBP12.12□□□□□ -0.47
CCDC40-211ENST00000574099 TRAV8-2A0A0B4J237 113 aa12.11□□□□□ -0.47
CCDC40-211ENST00000574099 ZNF98A6NK75 572 aa12.11□□□□□ -0.47
CCDC40-211ENST00000574099 GPX4P36969 197 aaPredicted RBP12.11□□□□□ -0.47
CCDC40-211ENST00000574099 TAS2R19P59542 299 aa12.11□□□□□ -0.47
CCDC40-211ENST00000574099 GPR107Q5VW38 600 aa12.11□□□□□ -0.47
CCDC40-211ENST00000574099 STEAP1BQ6NZ63 245 aa12.11□□□□□ -0.47
CCDC40-211ENST00000574099 TMEM229BQ8NBD8 167 aa12.11□□□□□ -0.47
CCDC40-211ENST00000574099 ZNF738Q8NE65 137 aa12.11□□□□□ -0.47
CCDC40-211ENST00000574099 FRZBQ92765 325 aa12.11□□□□□ -0.47
CCDC40-211ENST00000574099 TRGV9Q99603 122 aa12.11□□□□□ -0.47
CCDC40-211ENST00000574099 UPK3BQ9BT76 320 aa12.11□□□□□ -0.47
CCDC40-211ENST00000574099 HSPB7Q9UBY9 170 aa12.11□□□□□ -0.47
CCDC40-211ENST00000574099 MYCBP2O75592 4640 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms